Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 MIR4431-201ENST00000579990 94 ntBASIC3.05□□□□□ -1.92
VAMP4O75379 MIR3616-201ENST00000584070 92 ntBASIC3.05□□□□□ -1.92
VAMP4O75379 AL391903.3-201ENST00000612158 163 ntBASIC3.05□□□□□ -1.92
VAMP4O75379 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VAMP4O75379 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.05□□□□□ -1.92
VAMP4O75379 RNU6-418P-201ENST00000384035 107 ntBASIC3.04□□□□□ -1.92
VAMP4O75379 SEPT7P4-201ENST00000437076 306 ntBASIC3.04□□□□□ -1.92
VAMP4O75379 HSPE1P21-201ENST00000438283 308 ntBASIC3.04□□□□□ -1.92
VAMP4O75379 AC023141.11-201ENST00000508864 202 ntBASIC3.04□□□□□ -1.92
VAMP4O75379 AC093259.1-201ENST00000509755 300 ntBASIC3.04□□□□□ -1.92
VAMP4O75379 RPL23AP94-201ENST00000512518 302 ntBASIC3.04□□□□□ -1.92
VAMP4O75379 RNA5SP20-201ENST00000515976 84 ntBASIC3.04□□□□□ -1.92
VAMP4O75379 RNU7-121P-201ENST00000516604 62 ntBASIC3.04□□□□□ -1.92
VAMP4O75379 AP003357.1-201ENST00000604497 148 ntBASIC3.04□□□□□ -1.92
VAMP4O75379 AP001485.1-201ENST00000604799 199 ntBASIC3.04□□□□□ -1.92
VAMP4O75379 MIR548AY-201ENST00000617669 107 ntBASIC3.04□□□□□ -1.92
VAMP4O75379 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.04□□□□□ -1.92
VAMP4O75379 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
VAMP4O75379 SNORA38-201ENST00000363946 132 ntBASIC3.03□□□□□ -1.92
VAMP4O75379 RNU6-1240P-201ENST00000365155 104 ntBASIC3.03□□□□□ -1.92
VAMP4O75379 RNU6-449P-201ENST00000383914 107 ntBASIC3.03□□□□□ -1.92
VAMP4O75379 RNU6-239P-201ENST00000390990 99 ntBASIC3.03□□□□□ -1.92
VAMP4O75379 MTCO1P44-201ENST00000441935 243 ntBASIC3.03□□□□□ -1.92
VAMP4O75379 AL357134.1-201ENST00000445848 426 ntBASIC3.03□□□□□ -1.92
VAMP4O75379 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.03□□□□□ -1.92
VAMP4O75379 RNU7-116P-201ENST00000516940 62 ntBASIC3.03□□□□□ -1.92
VAMP4O75379 RNA5SP490-201ENST00000517141 136 ntBASIC3.03□□□□□ -1.92
VAMP4O75379 MIR4724-201ENST00000579485 89 ntBASIC3.03□□□□□ -1.92
VAMP4O75379 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.03□□□□□ -1.92
VAMP4O75379 AC005972.2-201ENST00000604690 348 ntBASIC3.03□□□□□ -1.92
VAMP4O75379 AC068647.2-201ENST00000637380 353 ntBASIC3.03□□□□□ -1.92
VAMP4O75379 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.03□□□□□ -1.92
VAMP4O75379 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
VAMP4O75379 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VAMP4O75379 Y_RNA.332-201ENST00000365271 113 ntBASIC3.02□□□□□ -1.93
VAMP4O75379 RNU6-1130P-201ENST00000365434 107 ntBASIC3.02□□□□□ -1.93
VAMP4O75379 RNU6-969P-201ENST00000383900 105 ntBASIC3.02□□□□□ -1.93
VAMP4O75379 SNORD116-13-201ENST00000384408 92 ntBASIC3.02□□□□□ -1.93
VAMP4O75379 Y_RNA.572-201ENST00000384757 98 ntBASIC3.02□□□□□ -1.93
VAMP4O75379 MIR548I2-201ENST00000408348 149 ntBASIC3.02□□□□□ -1.93
VAMP4O75379 SNORA36B-201ENST00000410438 131 ntBASIC3.02□□□□□ -1.93
VAMP4O75379 RNU2-48P-201ENST00000410694 191 ntBASIC3.02□□□□□ -1.93
VAMP4O75379 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.02□□□□□ -1.93
VAMP4O75379 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.02□□□□□ -1.93
VAMP4O75379 EEF1B2P7-201ENST00000451177 676 ntBASIC3.02□□□□□ -1.93
VAMP4O75379 AL137159.1-201ENST00000452808 512 ntBASIC3.02□□□□□ -1.93
VAMP4O75379 AC010531.2-201ENST00000465012 153 ntBASIC3.02□□□□□ -1.93
VAMP4O75379 AC117454.1-201ENST00000491120 168 ntBASIC3.02□□□□□ -1.93
VAMP4O75379 CKS1BP2-201ENST00000497342 240 ntBASIC3.02□□□□□ -1.93
VAMP4O75379 SCARNA8-201ENST00000515924 131 ntBASIC3.02□□□□□ -1.93
VAMP4O75379 MIR3670-2-201ENST00000582974 65 ntBASIC3.02□□□□□ -1.93
VAMP4O75379 MIR3670-1-201ENST00000584160 65 ntBASIC3.02□□□□□ -1.93
VAMP4O75379 MIR3670-3-201ENST00000584855 65 ntBASIC3.02□□□□□ -1.93
VAMP4O75379 AC013412.1-201ENST00000610687 192 ntBASIC3.02□□□□□ -1.93
VAMP4O75379 MIR3670-4-201ENST00000612260 65 ntBASIC3.02□□□□□ -1.93
VAMP4O75379 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.02□□□□□ -1.93
VAMP4O75379 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VAMP4O75379 MIR6073-201ENST00000352083 89 ntBASIC3.01□□□□□ -1.93
VAMP4O75379 RNU6-407P-201ENST00000365280 104 ntBASIC3.01□□□□□ -1.93
VAMP4O75379 RNU6-81P-201ENST00000365608 104 ntBASIC3.01□□□□□ -1.93
VAMP4O75379 SNORD116-18-201ENST00000383961 92 ntBASIC3.01□□□□□ -1.93
VAMP4O75379 Y_RNA.400-201ENST00000383963 111 ntBASIC3.01□□□□□ -1.93
VAMP4O75379 RNU6-1228P-201ENST00000391014 107 ntBASIC3.01□□□□□ -1.93
VAMP4O75379 RNU2-63P-201ENST00000410792 194 ntBASIC3.01□□□□□ -1.93
VAMP4O75379 AC016909.1-201ENST00000415916 166 ntBASIC3.01□□□□□ -1.93
VAMP4O75379 AC123900.1-201ENST00000420390 96 ntBASIC3.01□□□□□ -1.93
VAMP4O75379 AC004486.1-201ENST00000546846 233 ntBASIC3.01□□□□□ -1.93
VAMP4O75379 MIR4513-201ENST00000581077 86 ntBASIC3.01□□□□□ -1.93
VAMP4O75379 MIR5007-201ENST00000583098 95 ntBASIC3.01□□□□□ -1.93
VAMP4O75379 POLR3GP1-201ENST00000594073 261 ntBASIC3.01□□□□□ -1.93
VAMP4O75379 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.01□□□□□ -1.93
VAMP4O75379 AL449363.1-201ENST00000617815 186 ntBASIC3.01□□□□□ -1.93
VAMP4O75379 AC010297.1-201ENST00000623948 149 ntBASIC3.01□□□□□ -1.93
VAMP4O75379 CENPCP1-201ENST00000533085 2578 ntBASIC3□□□□□ -1.93
VAMP4O75379 RNU1-23P-201ENST00000363361 144 ntBASIC3□□□□□ -1.93
VAMP4O75379 MIR561-201ENST00000385216 97 ntBASIC3□□□□□ -1.93
VAMP4O75379 SNORA11.2-201ENST00000408318 127 ntBASIC3□□□□□ -1.93
VAMP4O75379 AC003685.2-201ENST00000422795 395 ntBASIC3□□□□□ -1.93
VAMP4O75379 AL606753.1-201ENST00000427435 87 ntBASIC3□□□□□ -1.93
VAMP4O75379 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3□□□□□ -1.93
VAMP4O75379 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3□□□□□ -1.93
VAMP4O75379 RNU7-26P-201ENST00000458980 63 ntBASIC3□□□□□ -1.93
VAMP4O75379 RNU6-453P-201ENST00000516819 85 ntBASIC3□□□□□ -1.93
VAMP4O75379 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3□□□□□ -1.93
VAMP4O75379 AC109810.1-201ENST00000534066 224 ntBASIC3□□□□□ -1.93
VAMP4O75379 PRELID2P1-201ENST00000552837 301 ntBASIC3□□□□□ -1.93
VAMP4O75379 AC127455.1-201ENST00000565496 145 ntBASIC3□□□□□ -1.93
VAMP4O75379 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
VAMP4O75379 MIR367-201ENST00000362299 68 ntBASIC2.99□□□□□ -1.93
VAMP4O75379 RNA5SP393-201ENST00000363423 117 ntBASIC2.99□□□□□ -1.93
VAMP4O75379 RNU6-117P-201ENST00000365415 107 ntBASIC2.99□□□□□ -1.93
VAMP4O75379 DEFA7P-201ENST00000382676 285 ntBASIC2.99□□□□□ -1.93
VAMP4O75379 RNY3P5-201ENST00000384127 102 ntBASIC2.99□□□□□ -1.93
VAMP4O75379 RNU6-376P-201ENST00000384731 106 ntBASIC2.99□□□□□ -1.93
VAMP4O75379 AL135786.1-201ENST00000415892 214 ntBASIC2.99□□□□□ -1.93
VAMP4O75379 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
VAMP4O75379 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.99□□□□□ -1.93
VAMP4O75379 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VAMP4O75379 AL356292.1-201ENST00000283110 373 ntBASIC2.98□□□□□ -1.93
VAMP4O75379 RNU6-674P-201ENST00000363831 107 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms