Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS4BO75351 AC011753.1-201ENST00000451001 220 ntBASIC2.39□□□□□ -2.03
VPS4BO75351 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.39□□□□□ -2.03
VPS4BO75351 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.39□□□□□ -2.03
VPS4BO75351 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS4BO75351 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.39□□□□□ -2.03
VPS4BO75351 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS4BO75351 RNU6-1337P-201ENST00000516525 95 ntBASIC2.39□□□□□ -2.03
VPS4BO75351 RNA5SP82-201ENST00000516707 92 ntBASIC2.39□□□□□ -2.03
VPS4BO75351 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.39□□□□□ -2.03
VPS4BO75351 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.39□□□□□ -2.03
VPS4BO75351 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS4BO75351 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
VPS4BO75351 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VPS4BO75351 SNORA38-201ENST00000363946 132 ntBASIC2.38□□□□□ -2.03
VPS4BO75351 RNU1-96P-201ENST00000364163 162 ntBASIC2.38□□□□□ -2.03
VPS4BO75351 SNORD114-30-201ENST00000364448 72 ntBASIC2.38□□□□□ -2.03
VPS4BO75351 Y_RNA.287-201ENST00000364853 94 ntBASIC2.38□□□□□ -2.03
VPS4BO75351 RNU6-160P-201ENST00000384591 107 ntBASIC2.38□□□□□ -2.03
VPS4BO75351 MIR27B-201ENST00000385129 97 ntBASIC2.38□□□□□ -2.03
VPS4BO75351 AL355497.1-201ENST00000406262 551 ntBASIC2.38□□□□□ -2.03
VPS4BO75351 BTF3P11-201ENST00000426582 477 ntBASIC2.38□□□□□ -2.03
VPS4BO75351 RPS20P10-201ENST00000451209 253 ntBASIC2.38□□□□□ -2.03
VPS4BO75351 U8.19-201ENST00000459095 133 ntBASIC2.38□□□□□ -2.03
VPS4BO75351 AC011406.1-201ENST00000512440 370 ntBASIC2.38□□□□□ -2.03
VPS4BO75351 SNORA81.3-201ENST00000517283 198 ntBASIC2.38□□□□□ -2.03
VPS4BO75351 MIR5692C2-201ENST00000577959 77 ntBASIC2.38□□□□□ -2.03
VPS4BO75351 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.38□□□□□ -2.03
VPS4BO75351 AC013791.1-201ENST00000616619 62 ntBASIC2.38□□□□□ -2.03
VPS4BO75351 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VPS4BO75351 Y_RNA.29-201ENST00000362570 113 ntBASIC2.37□□□□□ -2.03
VPS4BO75351 RNU6-653P-201ENST00000363074 106 ntBASIC2.37□□□□□ -2.03
VPS4BO75351 RNU1-22P-201ENST00000363334 158 ntBASIC2.37□□□□□ -2.03
VPS4BO75351 AL117342.1-201ENST00000404861 406 ntBASIC2.37□□□□□ -2.03
VPS4BO75351 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.37□□□□□ -2.03
VPS4BO75351 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.37□□□□□ -2.03
VPS4BO75351 HMGN2P34-201ENST00000437647 269 ntBASIC2.37□□□□□ -2.03
VPS4BO75351 AC104332.1-201ENST00000440471 797 ntBASIC2.37□□□□□ -2.03
VPS4BO75351 AC245102.2-201ENST00000448956 180 ntBASIC2.37□□□□□ -2.03
VPS4BO75351 AL138752.1-201ENST00000452964 351 ntBASIC2.37□□□□□ -2.03
VPS4BO75351 RN7SL636P-201ENST00000497504 294 ntBASIC2.37□□□□□ -2.03
VPS4BO75351 RNA5SP137-201ENST00000516833 135 ntBASIC2.37□□□□□ -2.03
VPS4BO75351 RNU6-548P-201ENST00000517083 115 ntBASIC2.37□□□□□ -2.03
VPS4BO75351 AP005660.1-201ENST00000522972 293 ntBASIC2.37□□□□□ -2.03
VPS4BO75351 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS4BO75351 AC026271.5-201ENST00000577873 130 ntBASIC2.37□□□□□ -2.03
VPS4BO75351 Z83818.1-201ENST00000603584 150 ntBASIC2.37□□□□□ -2.03
VPS4BO75351 AC004832.4-201ENST00000608952 331 ntBASIC2.37□□□□□ -2.03
VPS4BO75351 AL137847.3-201ENST00000611521 109 ntBASIC2.37□□□□□ -2.03
VPS4BO75351 U6.73-201ENST00000619194 103 ntBASIC2.37□□□□□ -2.03
VPS4BO75351 AL365265.1-201ENST00000621045 234 ntBASIC2.37□□□□□ -2.03
VPS4BO75351 AC068700.1-201ENST00000565862 3754 ntBASIC2.37□□□□□ -2.03
VPS4BO75351 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VPS4BO75351 snoU2-30.2-201ENST00000362805 70 ntBASIC2.36□□□□□ -2.03
VPS4BO75351 RNU6-407P-201ENST00000365280 104 ntBASIC2.36□□□□□ -2.03
VPS4BO75351 RNU6-1323P-201ENST00000384025 107 ntBASIC2.36□□□□□ -2.03
VPS4BO75351 MIR548I3-201ENST00000408378 149 ntBASIC2.36□□□□□ -2.03
VPS4BO75351 MIR548I1-201ENST00000408810 149 ntBASIC2.36□□□□□ -2.03
VPS4BO75351 AC009310.1-201ENST00000414414 451 ntBASIC2.36□□□□□ -2.03
VPS4BO75351 AC010154.1-201ENST00000425857 269 ntBASIC2.36□□□□□ -2.03
VPS4BO75351 AL356320.1-201ENST00000429616 163 ntBASIC2.36□□□□□ -2.03
VPS4BO75351 Y_RNA.644-201ENST00000459006 113 ntBASIC2.36□□□□□ -2.03
VPS4BO75351 HMGB3P3-201ENST00000510526 400 ntBASIC2.36□□□□□ -2.03
VPS4BO75351 RNU6-1146P-201ENST00000516282 102 ntBASIC2.36□□□□□ -2.03
VPS4BO75351 Y_RNA.674-201ENST00000516362 113 ntBASIC2.36□□□□□ -2.03
VPS4BO75351 AL137100.2-201ENST00000555786 315 ntBASIC2.36□□□□□ -2.03
VPS4BO75351 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS4BO75351 MIR3169-201ENST00000578032 83 ntBASIC2.36□□□□□ -2.03
VPS4BO75351 AC067747.1-201ENST00000608026 250 ntBASIC2.36□□□□□ -2.03
VPS4BO75351 MIR338-201ENST00000636369 67 ntBASIC2.36□□□□□ -2.03
VPS4BO75351 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.36□□□□□ -2.03
VPS4BO75351 RNA5SP289-201ENST00000362332 137 ntBASIC2.35□□□□□ -2.03
VPS4BO75351 RNU6-899P-201ENST00000363947 107 ntBASIC2.35□□□□□ -2.03
VPS4BO75351 RNU1-52P-201ENST00000384190 164 ntBASIC2.35□□□□□ -2.03
VPS4BO75351 SNORD116-13-201ENST00000384408 92 ntBASIC2.35□□□□□ -2.03
VPS4BO75351 MIR144-201ENST00000384886 86 ntBASIC2.35□□□□□ -2.03
VPS4BO75351 MIR29C-201ENST00000385231 88 ntBASIC2.35□□□□□ -2.03
VPS4BO75351 MIR524-201ENST00000385242 87 ntBASIC2.35□□□□□ -2.03
VPS4BO75351 RNU7-141P-201ENST00000459304 62 ntBASIC2.35□□□□□ -2.03
VPS4BO75351 AC097462.1-201ENST00000514125 324 ntBASIC2.35□□□□□ -2.03
VPS4BO75351 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.35□□□□□ -2.03
VPS4BO75351 RNU6-182P-201ENST00000516970 105 ntBASIC2.35□□□□□ -2.03
VPS4BO75351 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS4BO75351 AC098479.1-201ENST00000609225 154 ntBASIC2.35□□□□□ -2.03
VPS4BO75351 AC004792.1-201ENST00000614523 137 ntBASIC2.35□□□□□ -2.03
VPS4BO75351 AL356292.1-201ENST00000283110 373 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VPS4BO75351 MIR21-201ENST00000362134 72 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 RNU6-1048P-201ENST00000364054 107 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 RNA5SP493-201ENST00000364115 91 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 Y_RNA.262-201ENST00000364641 102 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 Y_RNA.435-201ENST00000384095 112 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS4BO75351 AL162725.1-201ENST00000435405 301 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS4BO75351 RPS27P22-201ENST00000478056 241 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 RNU7-115P-201ENST00000516433 55 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 RNU7-128P-201ENST00000517247 62 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 AC007336.1-201ENST00000576365 3828 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 MIR4438-201ENST00000585271 93 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 1027.6 ms