Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RNU6-926P-201ENST00000384075 107 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 MIR1304-201ENST00000408243 91 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 U3.40-201ENST00000408706 208 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 AC005002.2-201ENST00000438228 269 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.87□□□□□ -2.11
CACNA1FO60840 RNU6-436P-201ENST00000516171 114 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 RNU6-344P-201ENST00000516635 111 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.87□□□□□ -2.11
CACNA1FO60840 AC015720.1-201ENST00000565251 277 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 PCGEM1.1-201ENST00000613431 131 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 RNU1-62P-201ENST00000362599 164 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 Y_RNA.297-201ENST00000364950 91 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 SNORA18.2-201ENST00000383865 132 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 Y_RNA.415-201ENST00000384012 112 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 RNU6-793P-201ENST00000384233 104 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 Y_RNA.562-201ENST00000384695 113 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 Y_RNA.597-201ENST00000410463 100 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 AC009237.7-201ENST00000447357 229 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 UQCRBP2-201ENST00000447827 297 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 NDUFB4P10-201ENST00000452541 359 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 EIF4A1P12-201ENST00000551910 141 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 MIR4421-201ENST00000578133 69 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 FTX_2.1-201ENST00000618816 94 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 AC006001.4-201ENST00000622243 395 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 AC068205.3-201ENST00000636385 468 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 RNU6-944P-201ENST00000364023 107 ntBASIC1.86□□□□□ -2.11
CACNA1FO60840 Y_RNA.796-201ENST00000364268 102 ntBASIC1.86□□□□□ -2.11
CACNA1FO60840 Y_RNA.799-201ENST00000364992 102 ntBASIC1.86□□□□□ -2.11
CACNA1FO60840 RNU6-187P-201ENST00000384139 106 ntBASIC1.86□□□□□ -2.11
CACNA1FO60840 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.86□□□□□ -2.11
CACNA1FO60840 AC024067.1-201ENST00000426199 223 ntBASIC1.86□□□□□ -2.11
CACNA1FO60840 BTF3P11-201ENST00000426582 477 ntBASIC1.86□□□□□ -2.11
CACNA1FO60840 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.86□□□□□ -2.11
CACNA1FO60840 AC080013.2-201ENST00000460866 323 ntBASIC1.86□□□□□ -2.11
CACNA1FO60840 AC023141.11-201ENST00000508864 202 ntBASIC1.86□□□□□ -2.11
CACNA1FO60840 MIR449C-201ENST00000516047 92 ntBASIC1.86□□□□□ -2.11
CACNA1FO60840 Y_RNA.679-201ENST00000516416 91 ntBASIC1.86□□□□□ -2.11
CACNA1FO60840 RNU5F-4P-201ENST00000516581 114 ntBASIC1.86□□□□□ -2.11
CACNA1FO60840 RNU2-31P-201ENST00000516954 155 ntBASIC1.86□□□□□ -2.11
CACNA1FO60840 RNU6-182P-201ENST00000516970 105 ntBASIC1.86□□□□□ -2.11
CACNA1FO60840 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.86□□□□□ -2.11
CACNA1FO60840 U2.14-201ENST00000615943 113 ntBASIC1.86□□□□□ -2.11
CACNA1FO60840 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CACNA1FO60840 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CACNA1FO60840 MIR410-201ENST00000362222 80 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 RNU6-655P-201ENST00000362858 107 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 SNORD87-201ENST00000364849 89 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 AL354695.1-201ENST00000427935 228 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.85□□□□□ -2.11
CACNA1FO60840 Y_RNA.644-201ENST00000459006 113 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 Y_RNA.674-201ENST00000516362 113 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 RNU6-966P-201ENST00000516479 104 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 AC004792.1-201ENST00000614523 137 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 AC004467.1-201ENST00000615678 330 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
CACNA1FO60840 Y_RNA.101-201ENST00000363154 102 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 Y_RNA.117-201ENST00000363294 101 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 Y_RNA.136-201ENST00000363444 102 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 Y_RNA.230-201ENST00000364348 109 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 Y_RNA.329-201ENST00000365209 107 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 RNU6-438P-201ENST00000365561 103 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 Y_RNA.478-201ENST00000384358 107 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 RNU4-70P-201ENST00000384579 139 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 BTF3P4-201ENST00000418852 495 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 AC097463.2-201ENST00000421074 142 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 PRELID3BP1-201ENST00000457142 540 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 AP001324.2-201ENST00000461163 319 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 RNA5SP445-201ENST00000515889 115 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 RNA5SP112-201ENST00000515937 99 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 MIR4529-201ENST00000578110 78 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 MIR6840-201ENST00000611937 71 ntBASIC1.85□□□□□ -2.11
CACNA1FO60840 RNU6-801P-201ENST00000364087 105 ntBASIC1.84□□□□□ -2.11
CACNA1FO60840 RNU6-740P-201ENST00000364734 105 ntBASIC1.84□□□□□ -2.11
CACNA1FO60840 Y_RNA.515-201ENST00000384535 112 ntBASIC1.84□□□□□ -2.11
CACNA1FO60840 SNORA27.4-201ENST00000516650 95 ntBASIC1.84□□□□□ -2.11
CACNA1FO60840 RPL21P9-201ENST00000556149 474 ntBASIC1.84□□□□□ -2.11
CACNA1FO60840 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.84□□□□□ -2.11
CACNA1FO60840 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CACNA1FO60840 Y_RNA.793-201ENST00000411222 111 ntBASIC1.83□□□□□ -2.12
CACNA1FO60840 RNU6-965P-201ENST00000516721 96 ntBASIC1.83□□□□□ -2.12
CACNA1FO60840 SNORA31.25-201ENST00000517242 134 ntBASIC1.83□□□□□ -2.12
CACNA1FO60840 AP005660.1-201ENST00000522972 293 ntBASIC1.83□□□□□ -2.12
CACNA1FO60840 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.83□□□□□ -2.12
CACNA1FO60840 AC105245.1-201ENST00000581934 244 ntBASIC1.83□□□□□ -2.12
CACNA1FO60840 SNORD11B-201ENST00000607707 90 ntBASIC1.83□□□□□ -2.12
CACNA1FO60840 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.83□□□□□ -2.12
CACNA1FO60840 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.83□□□□□ -2.12
CACNA1FO60840 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CACNA1FO60840 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CACNA1FO60840 RNA5SP125-201ENST00000364843 120 ntBASIC1.83□□□□□ -2.12
CACNA1FO60840 Y_RNA.508-201ENST00000384502 114 ntBASIC1.83□□□□□ -2.12
CACNA1FO60840 MIR186-201ENST00000384988 86 ntBASIC1.83□□□□□ -2.12
CACNA1FO60840 MIR29B2-201ENST00000385055 81 ntBASIC1.83□□□□□ -2.12
CACNA1FO60840 RPS29P29-201ENST00000456396 171 ntBASIC1.83□□□□□ -2.12
CACNA1FO60840 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.83□□□□□ -2.12
CACNA1FO60840 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.82□□□□□ -2.12
CACNA1FO60840 Y_RNA.150-201ENST00000363562 102 ntBASIC1.82□□□□□ -2.12
CACNA1FO60840 SNORD115-30-201ENST00000364117 82 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms