Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CTNND1O60716 RNU1-17P-201ENST00000363022 152 ntBASIC2.33□□□□□ -2.04
CTNND1O60716 RNU1-22P-201ENST00000363334 158 ntBASIC2.33□□□□□ -2.04
CTNND1O60716 SNORA33-201ENST00000363664 130 ntBASIC2.33□□□□□ -2.04
CTNND1O60716 Y_RNA.512-201ENST00000384518 102 ntBASIC2.33□□□□□ -2.04
CTNND1O60716 SNORA40.18-201ENST00000391200 128 ntBASIC2.33□□□□□ -2.04
CTNND1O60716 AL512604.1-201ENST00000404812 257 ntBASIC2.33□□□□□ -2.04
CTNND1O60716 RNU6-710P-201ENST00000410424 105 ntBASIC2.33□□□□□ -2.04
CTNND1O60716 AL158823.1-201ENST00000418441 478 ntBASIC2.33□□□□□ -2.04
CTNND1O60716 AC024067.1-201ENST00000426199 223 ntBASIC2.33□□□□□ -2.04
CTNND1O60716 HSPE1P13-201ENST00000451143 297 ntBASIC2.33□□□□□ -2.04
CTNND1O60716 AC090255.1-201ENST00000495779 349 ntBASIC2.33□□□□□ -2.04
CTNND1O60716 AC097462.1-201ENST00000514125 324 ntBASIC2.33□□□□□ -2.04
CTNND1O60716 RNU7-172P-201ENST00000517125 64 ntBASIC2.33□□□□□ -2.04
CTNND1O60716 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.33□□□□□ -2.04
CTNND1O60716 MIR8062-201ENST00000621515 85 ntBASIC2.33□□□□□ -2.04
CTNND1O60716 AC127459.3-201ENST00000624328 466 ntBASIC2.33□□□□□ -2.04
CTNND1O60716 U6.108-201ENST00000637764 58 ntBASIC2.33□□□□□ -2.04
CTNND1O60716 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.32□□□□□ -2.04
CTNND1O60716 Y_RNA.84-201ENST00000363011 104 ntBASIC2.32□□□□□ -2.04
CTNND1O60716 RNA5SP37-201ENST00000365420 130 ntBASIC2.32□□□□□ -2.04
CTNND1O60716 SNORA8-201ENST00000384574 139 ntBASIC2.32□□□□□ -2.04
CTNND1O60716 Y_RNA.569-201ENST00000384749 103 ntBASIC2.32□□□□□ -2.04
CTNND1O60716 RNA5SP212-201ENST00000391223 107 ntBASIC2.32□□□□□ -2.04
CTNND1O60716 AL163195.1-201ENST00000496941 348 ntBASIC2.32□□□□□ -2.04
CTNND1O60716 MTCO2P24-201ENST00000515611 426 ntBASIC2.32□□□□□ -2.04
CTNND1O60716 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.32□□□□□ -2.04
CTNND1O60716 MIR5089-201ENST00000580047 84 ntBASIC2.32□□□□□ -2.04
CTNND1O60716 DEFB117-201ENST00000602356 141 ntBASIC2.32□□□□□ -2.04
CTNND1O60716 AP000942.3-201ENST00000603702 160 ntBASIC2.32□□□□□ -2.04
CTNND1O60716 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.32□□□□□ -2.04
CTNND1O60716 AP000553.5-201ENST00000641933 54 ntBASIC2.32□□□□□ -2.04
CTNND1O60716 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CTNND1O60716 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CTNND1O60716 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
CTNND1O60716 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CTNND1O60716 RNU6-290P-201ENST00000365212 101 ntBASIC2.31□□□□□ -2.04
CTNND1O60716 Y_RNA.541-201ENST00000384640 113 ntBASIC2.31□□□□□ -2.04
CTNND1O60716 MIR17-201ENST00000385012 84 ntBASIC2.31□□□□□ -2.04
CTNND1O60716 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CTNND1O60716 AC245047.4-201ENST00000433189 144 ntBASIC2.31□□□□□ -2.04
CTNND1O60716 RNU7-128P-201ENST00000517247 62 ntBASIC2.31□□□□□ -2.04
CTNND1O60716 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.31□□□□□ -2.04
CTNND1O60716 RPL21P9-201ENST00000556149 474 ntBASIC2.31□□□□□ -2.04
CTNND1O60716 U6.104-201ENST00000637979 90 ntBASIC2.31□□□□□ -2.04
CTNND1O60716 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.31□□□□□ -2.04
CTNND1O60716 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CTNND1O60716 Y_RNA.376-201ENST00000365638 108 ntBASIC2.3□□□□□ -2.04
CTNND1O60716 RNU6-1248P-201ENST00000391096 64 ntBASIC2.3□□□□□ -2.04
CTNND1O60716 RNU11-5P-201ENST00000391216 129 ntBASIC2.3□□□□□ -2.04
CTNND1O60716 RNA5SP100-201ENST00000410903 110 ntBASIC2.3□□□□□ -2.04
CTNND1O60716 RNA5SP59-201ENST00000410922 110 ntBASIC2.3□□□□□ -2.04
CTNND1O60716 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.3□□□□□ -2.04
CTNND1O60716 MTND3P2-201ENST00000438452 342 ntBASIC2.3□□□□□ -2.04
CTNND1O60716 AC069257.2-201ENST00000441819 155 ntBASIC2.3□□□□□ -2.04
CTNND1O60716 HMGN1P10-201ENST00000474557 553 ntBASIC2.3□□□□□ -2.04
CTNND1O60716 AC010409.1-201ENST00000487382 476 ntBASIC2.3□□□□□ -2.04
CTNND1O60716 RNU6-1278P-201ENST00000516130 107 ntBASIC2.3□□□□□ -2.04
CTNND1O60716 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.3□□□□□ -2.04
CTNND1O60716 RNU6-570P-201ENST00000517051 105 ntBASIC2.3□□□□□ -2.04
CTNND1O60716 MIR4287-201ENST00000579398 78 ntBASIC2.3□□□□□ -2.04
CTNND1O60716 AL162730.1-201ENST00000605734 292 ntBASIC2.3□□□□□ -2.04
CTNND1O60716 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.3□□□□□ -2.04
CTNND1O60716 AL773524.1-201ENST00000614065 229 ntBASIC2.3□□□□□ -2.04
CTNND1O60716 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.3□□□□□ -2.04
CTNND1O60716 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CTNND1O60716 AL596028.1-201ENST00000326971 197 ntBASIC2.29□□□□□ -2.04
CTNND1O60716 Y_RNA.136-201ENST00000363444 102 ntBASIC2.29□□□□□ -2.04
CTNND1O60716 RNU6-112P-201ENST00000363599 104 ntBASIC2.29□□□□□ -2.04
CTNND1O60716 RNU6-117P-201ENST00000365415 107 ntBASIC2.29□□□□□ -2.04
CTNND1O60716 SNORA53-201ENST00000391141 249 ntBASIC2.29□□□□□ -2.04
CTNND1O60716 MIR1302-6-201ENST00000408466 90 ntBASIC2.29□□□□□ -2.04
CTNND1O60716 RNU6-1203P-201ENST00000410703 110 ntBASIC2.29□□□□□ -2.04
CTNND1O60716 AL445685.2-201ENST00000422551 342 ntBASIC2.29□□□□□ -2.04
CTNND1O60716 MTCYBP9-201ENST00000431021 303 ntBASIC2.29□□□□□ -2.04
CTNND1O60716 RPS26P45-201ENST00000471748 340 ntBASIC2.29□□□□□ -2.04
CTNND1O60716 RNU6-1337P-201ENST00000516525 95 ntBASIC2.29□□□□□ -2.04
CTNND1O60716 MIR3145-201ENST00000580727 82 ntBASIC2.29□□□□□ -2.04
CTNND1O60716 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.29□□□□□ -2.04
CTNND1O60716 Y_RNA.140-201ENST00000363474 103 ntBASIC2.28□□□□□ -2.04
CTNND1O60716 RNU6-326P-201ENST00000365480 107 ntBASIC2.28□□□□□ -2.04
CTNND1O60716 MIR520A-201ENST00000384862 85 ntBASIC2.28□□□□□ -2.04
CTNND1O60716 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.28□□□□□ -2.04
CTNND1O60716 RNU6-717P-201ENST00000459076 104 ntBASIC2.28□□□□□ -2.04
CTNND1O60716 RNA5SP57-201ENST00000459463 123 ntBASIC2.28□□□□□ -2.04
CTNND1O60716 TRBVB-201ENST00000477100 408 ntBASIC2.28□□□□□ -2.04
CTNND1O60716 RNU2-31P-201ENST00000516954 155 ntBASIC2.28□□□□□ -2.04
CTNND1O60716 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.28□□□□□ -2.04
CTNND1O60716 AL161670.1-201ENST00000554348 137 ntBASIC2.28□□□□□ -2.04
CTNND1O60716 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.28□□□□□ -2.04
CTNND1O60716 AC073413.2-201ENST00000604332 360 ntBASIC2.28□□□□□ -2.04
CTNND1O60716 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CTNND1O60716 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.28□□□□□ -2.05
CTNND1O60716 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CTNND1O60716 Y_RNA.418-201ENST00000384029 102 ntBASIC2.27□□□□□ -2.05
CTNND1O60716 RNU6-296P-201ENST00000384608 107 ntBASIC2.27□□□□□ -2.05
CTNND1O60716 RNU6-376P-201ENST00000384731 106 ntBASIC2.27□□□□□ -2.05
CTNND1O60716 MIR568-201ENST00000385036 95 ntBASIC2.27□□□□□ -2.05
CTNND1O60716 snosnR66.1-201ENST00000391095 99 ntBASIC2.27□□□□□ -2.05
CTNND1O60716 MIR1302-3-201ENST00000408128 138 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms