Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 MIR1252-201ENST00000408861 65 ntBASIC1.58□□□□□ -2.16
XRCC3O43542 RNU2-61P-201ENST00000411069 191 ntBASIC1.58□□□□□ -2.16
XRCC3O43542 RPL23AP36-201ENST00000413895 458 ntBASIC1.58□□□□□ -2.16
XRCC3O43542 AL161935.2-201ENST00000414627 60 ntBASIC1.58□□□□□ -2.16
XRCC3O43542 AC005534.2-201ENST00000431047 433 ntBASIC1.58□□□□□ -2.16
XRCC3O43542 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.58□□□□□ -2.16
XRCC3O43542 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.58□□□□□ -2.16
XRCC3O43542 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.58□□□□□ -2.16
XRCC3O43542 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.58□□□□□ -2.16
XRCC3O43542 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.58□□□□□ -2.16
XRCC3O43542 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.58□□□□□ -2.16
XRCC3O43542 AC091178.2-201ENST00000584401 117 ntBASIC1.58□□□□□ -2.16
XRCC3O43542 AC044792.1-201ENST00000593294 196 ntBASIC1.58□□□□□ -2.16
XRCC3O43542 AL929325.1-201ENST00000603096 117 ntBASIC1.58□□□□□ -2.16
XRCC3O43542 AC011373.1-201ENST00000607270 237 ntBASIC1.58□□□□□ -2.16
XRCC3O43542 AC040896.1-201ENST00000613819 479 ntBASIC1.58□□□□□ -2.16
XRCC3O43542 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.58□□□□□ -2.16
XRCC3O43542 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
XRCC3O43542 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.58□□□□□ -2.16
XRCC3O43542 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
XRCC3O43542 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
XRCC3O43542 MIR424-201ENST00000362227 98 ntBASIC1.57□□□□□ -2.16
XRCC3O43542 Y_RNA.143-201ENST00000363520 106 ntBASIC1.57□□□□□ -2.16
XRCC3O43542 Y_RNA.158-201ENST00000363651 101 ntBASIC1.57□□□□□ -2.16
XRCC3O43542 RNU6-324P-201ENST00000363957 106 ntBASIC1.57□□□□□ -2.16
XRCC3O43542 Y_RNA.202-201ENST00000364083 110 ntBASIC1.57□□□□□ -2.16
XRCC3O43542 SNORD48-201ENST00000364953 64 ntBASIC1.57□□□□□ -2.16
XRCC3O43542 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.57□□□□□ -2.16
XRCC3O43542 Y_RNA.389-201ENST00000383924 113 ntBASIC1.57□□□□□ -2.16
XRCC3O43542 RNU6-937P-201ENST00000384325 106 ntBASIC1.57□□□□□ -2.16
XRCC3O43542 RNU6-376P-201ENST00000384731 106 ntBASIC1.57□□□□□ -2.16
XRCC3O43542 MIR562-201ENST00000384894 95 ntBASIC1.57□□□□□ -2.16
XRCC3O43542 RNU6-440P-201ENST00000390882 105 ntBASIC1.57□□□□□ -2.16
XRCC3O43542 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.57□□□□□ -2.16
XRCC3O43542 RNU6-101P-201ENST00000410323 104 ntBASIC1.57□□□□□ -2.16
XRCC3O43542 RN7SKP200-201ENST00000410564 320 ntBASIC1.57□□□□□ -2.16
XRCC3O43542 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.57□□□□□ -2.16
XRCC3O43542 HSPE1P21-201ENST00000438283 308 ntBASIC1.57□□□□□ -2.16
XRCC3O43542 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.57□□□□□ -2.16
XRCC3O43542 RNA5SP458-201ENST00000516188 119 ntBASIC1.57□□□□□ -2.16
XRCC3O43542 RNU6-341P-201ENST00000516973 96 ntBASIC1.57□□□□□ -2.16
XRCC3O43542 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.57□□□□□ -2.16
XRCC3O43542 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.57□□□□□ -2.16
XRCC3O43542 MIR3618-201ENST00000580330 88 ntBASIC1.57□□□□□ -2.16
XRCC3O43542 AL356055.1-201ENST00000602528 446 ntBASIC1.57□□□□□ -2.16
XRCC3O43542 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.57□□□□□ -2.16
XRCC3O43542 AC095038.3-201ENST00000634439 195 ntBASIC1.57□□□□□ -2.16
XRCC3O43542 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.57□□□□□ -2.16
XRCC3O43542 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
XRCC3O43542 AC100821.1-201ENST00000523153 2479 ntBASIC1.56□□□□□ -2.16
XRCC3O43542 SNORD81.1-201ENST00000363064 77 ntBASIC1.56□□□□□ -2.16
XRCC3O43542 Y_RNA.380-201ENST00000365663 111 ntBASIC1.56□□□□□ -2.16
XRCC3O43542 RNU6-203P-201ENST00000384038 104 ntBASIC1.56□□□□□ -2.16
XRCC3O43542 SNORA64-201ENST00000384674 134 ntBASIC1.56□□□□□ -2.16
XRCC3O43542 RNU6-1031P-201ENST00000384773 107 ntBASIC1.56□□□□□ -2.16
XRCC3O43542 MIR194-1-201ENST00000384892 85 ntBASIC1.56□□□□□ -2.16
XRCC3O43542 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.56□□□□□ -2.16
XRCC3O43542 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.56□□□□□ -2.16
XRCC3O43542 RNU2-2P-201ENST00000410396 191 ntBASIC1.56□□□□□ -2.16
XRCC3O43542 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.56□□□□□ -2.16
XRCC3O43542 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.56□□□□□ -2.16
XRCC3O43542 snoU13.9-201ENST00000458927 103 ntBASIC1.56□□□□□ -2.16
XRCC3O43542 AC099513.1-201ENST00000490423 301 ntBASIC1.56□□□□□ -2.16
XRCC3O43542 AC107393.1-201ENST00000512403 346 ntBASIC1.56□□□□□ -2.16
XRCC3O43542 RNU6-1337P-201ENST00000516525 95 ntBASIC1.56□□□□□ -2.16
XRCC3O43542 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.55□□□□□ -2.16
XRCC3O43542 ZNF355P-201ENST00000427301 3216 ntBASIC1.55□□□□□ -2.16
XRCC3O43542 Y_RNA.183-201ENST00000363882 113 ntBASIC1.55□□□□□ -2.16
XRCC3O43542 RNU6-450P-201ENST00000364654 107 ntBASIC1.55□□□□□ -2.16
XRCC3O43542 Y_RNA.329-201ENST00000365209 107 ntBASIC1.55□□□□□ -2.16
XRCC3O43542 Y_RNA.331-201ENST00000365267 102 ntBASIC1.55□□□□□ -2.16
XRCC3O43542 MIR934-201ENST00000401241 83 ntBASIC1.55□□□□□ -2.16
XRCC3O43542 RNU7-34P-201ENST00000459394 64 ntBASIC1.55□□□□□ -2.16
XRCC3O43542 AC091021.1-201ENST00000468051 388 ntBASIC1.55□□□□□ -2.16
XRCC3O43542 AC005908.1-201ENST00000468701 347 ntBASIC1.55□□□□□ -2.16
XRCC3O43542 Y_RNA.676-201ENST00000516393 96 ntBASIC1.55□□□□□ -2.16
XRCC3O43542 RNU6-63P-201ENST00000516690 95 ntBASIC1.55□□□□□ -2.16
XRCC3O43542 RNU6-1153P-201ENST00000516760 105 ntBASIC1.55□□□□□ -2.16
XRCC3O43542 RNU7-110P-201ENST00000516891 62 ntBASIC1.55□□□□□ -2.16
XRCC3O43542 AC136932.1-201ENST00000574771 208 ntBASIC1.55□□□□□ -2.16
XRCC3O43542 AL162424.1-201ENST00000602325 221 ntBASIC1.55□□□□□ -2.16
XRCC3O43542 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.55□□□□□ -2.16
XRCC3O43542 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.55□□□□□ -2.16
XRCC3O43542 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
XRCC3O43542 SNORA33.2-201ENST00000365413 134 ntBASIC1.54□□□□□ -2.16
XRCC3O43542 Y_RNA.455-201ENST00000384230 98 ntBASIC1.54□□□□□ -2.16
XRCC3O43542 MIR520G-201ENST00000385064 90 ntBASIC1.54□□□□□ -2.16
XRCC3O43542 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.54□□□□□ -2.16
XRCC3O43542 RNU6-897P-201ENST00000517135 105 ntBASIC1.54□□□□□ -2.16
XRCC3O43542 MIR4680-201ENST00000580906 66 ntBASIC1.54□□□□□ -2.16
XRCC3O43542 RAC1P9-201ENST00000604990 392 ntBASIC1.54□□□□□ -2.16
XRCC3O43542 AC016925.2-201ENST00000605108 242 ntBASIC1.54□□□□□ -2.16
XRCC3O43542 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.54□□□□□ -2.16
XRCC3O43542 AC021506.2-201ENST00000612354 169 ntBASIC1.54□□□□□ -2.16
XRCC3O43542 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.54□□□□□ -2.16
XRCC3O43542 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.54□□□□□ -2.16
XRCC3O43542 Y_RNA.338-201ENST00000365320 114 ntBASIC1.53□□□□□ -2.16
XRCC3O43542 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
XRCC3O43542 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.53□□□□□ -2.16
XRCC3O43542 RNU6-338P-201ENST00000383888 105 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms