Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
PRPF3O43395 RNA5SP160-201ENST00000364866 120 ntBASIC2.35□□□□□ -2.03
PRPF3O43395 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.35□□□□□ -2.03
PRPF3O43395 POLR2KP2-201ENST00000438155 177 ntBASIC2.35□□□□□ -2.03
PRPF3O43395 AC097462.1-201ENST00000514125 324 ntBASIC2.35□□□□□ -2.03
PRPF3O43395 RNU6-436P-201ENST00000516171 114 ntBASIC2.35□□□□□ -2.03
PRPF3O43395 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.35□□□□□ -2.03
PRPF3O43395 U6.104-201ENST00000637979 90 ntBASIC2.35□□□□□ -2.03
PRPF3O43395 ZNF355P-201ENST00000427301 3216 ntBASIC2.34□□□□□ -2.03
PRPF3O43395 SNORD81.1-201ENST00000363064 77 ntBASIC2.34□□□□□ -2.03
PRPF3O43395 SNORA16B-201ENST00000364674 135 ntBASIC2.34□□□□□ -2.03
PRPF3O43395 MIR568-201ENST00000385036 95 ntBASIC2.34□□□□□ -2.03
PRPF3O43395 HMGN2P38-201ENST00000423806 265 ntBASIC2.34□□□□□ -2.03
PRPF3O43395 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.34□□□□□ -2.03
PRPF3O43395 RPL36AP21-201ENST00000490372 323 ntBASIC2.34□□□□□ -2.03
PRPF3O43395 AC090255.1-201ENST00000495779 349 ntBASIC2.34□□□□□ -2.03
PRPF3O43395 RNVU1-2-201ENST00000516326 135 ntBASIC2.34□□□□□ -2.03
PRPF3O43395 RNU6-570P-201ENST00000517051 105 ntBASIC2.34□□□□□ -2.03
PRPF3O43395 MIR5089-201ENST00000580047 84 ntBASIC2.34□□□□□ -2.03
PRPF3O43395 AL627230.6-201ENST00000611129 280 ntBASIC2.34□□□□□ -2.03
PRPF3O43395 Y_RNA.783-201ENST00000613546 102 ntBASIC2.34□□□□□ -2.03
PRPF3O43395 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.34□□□□□ -2.03
PRPF3O43395 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PRPF3O43395 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PRPF3O43395 Y_RNA.84-201ENST00000363011 104 ntBASIC2.33□□□□□ -2.04
PRPF3O43395 RNU1-22P-201ENST00000363334 158 ntBASIC2.33□□□□□ -2.04
PRPF3O43395 SNORA63D-201ENST00000364359 132 ntBASIC2.33□□□□□ -2.04
PRPF3O43395 Y_RNA.329-201ENST00000365209 107 ntBASIC2.33□□□□□ -2.04
PRPF3O43395 RNU6-407P-201ENST00000365280 104 ntBASIC2.33□□□□□ -2.04
PRPF3O43395 Y_RNA.383-201ENST00000383855 97 ntBASIC2.33□□□□□ -2.04
PRPF3O43395 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
PRPF3O43395 RNU6-482P-201ENST00000391068 107 ntBASIC2.33□□□□□ -2.04
PRPF3O43395 MIR1302-3-201ENST00000408128 138 ntBASIC2.33□□□□□ -2.04
PRPF3O43395 RNU2-61P-201ENST00000411069 191 ntBASIC2.33□□□□□ -2.04
PRPF3O43395 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PRPF3O43395 U8.19-201ENST00000459095 133 ntBASIC2.33□□□□□ -2.04
PRPF3O43395 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.33□□□□□ -2.04
PRPF3O43395 AC108210.2-201ENST00000503681 201 ntBASIC2.33□□□□□ -2.04
PRPF3O43395 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.33□□□□□ -2.04
PRPF3O43395 RNU7-172P-201ENST00000517125 64 ntBASIC2.33□□□□□ -2.04
PRPF3O43395 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.33□□□□□ -2.04
PRPF3O43395 AC023157.2-201ENST00000540596 141 ntBASIC2.33□□□□□ -2.04
PRPF3O43395 AC084364.2-201ENST00000546924 395 ntBASIC2.33□□□□□ -2.04
PRPF3O43395 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.33□□□□□ -2.04
PRPF3O43395 AC037487.3-201ENST00000606668 112 ntBASIC2.33□□□□□ -2.04
PRPF3O43395 AC127459.3-201ENST00000624328 466 ntBASIC2.33□□□□□ -2.04
PRPF3O43395 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
PRPF3O43395 Y_RNA.124-201ENST00000363339 93 ntBASIC2.32□□□□□ -2.04
PRPF3O43395 RNU6-112P-201ENST00000363599 104 ntBASIC2.32□□□□□ -2.04
PRPF3O43395 RNU6-290P-201ENST00000365212 101 ntBASIC2.32□□□□□ -2.04
PRPF3O43395 Y_RNA.376-201ENST00000365638 108 ntBASIC2.32□□□□□ -2.04
PRPF3O43395 Y_RNA.461-201ENST00000384263 103 ntBASIC2.32□□□□□ -2.04
PRPF3O43395 Y_RNA.541-201ENST00000384640 113 ntBASIC2.32□□□□□ -2.04
PRPF3O43395 MIR1302-6-201ENST00000408466 90 ntBASIC2.32□□□□□ -2.04
PRPF3O43395 RNA5SP100-201ENST00000410903 110 ntBASIC2.32□□□□□ -2.04
PRPF3O43395 RNA5SP59-201ENST00000410922 110 ntBASIC2.32□□□□□ -2.04
PRPF3O43395 RNU1-40P-201ENST00000516816 164 ntBASIC2.32□□□□□ -2.04
PRPF3O43395 RNU1-97P-201ENST00000516872 164 ntBASIC2.32□□□□□ -2.04
PRPF3O43395 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.32□□□□□ -2.04
PRPF3O43395 MIR4713-201ENST00000582691 75 ntBASIC2.32□□□□□ -2.04
PRPF3O43395 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.32□□□□□ -2.04
PRPF3O43395 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.32□□□□□ -2.04
PRPF3O43395 MIR520G-201ENST00000385064 90 ntBASIC2.31□□□□□ -2.04
PRPF3O43395 RNA5SP467-201ENST00000391274 118 ntBASIC2.31□□□□□ -2.04
PRPF3O43395 RNU6-1186P-201ENST00000410429 97 ntBASIC2.31□□□□□ -2.04
PRPF3O43395 RNU6-1203P-201ENST00000410703 110 ntBASIC2.31□□□□□ -2.04
PRPF3O43395 RNU2-7P-201ENST00000410794 178 ntBASIC2.31□□□□□ -2.04
PRPF3O43395 RNU6-717P-201ENST00000459076 104 ntBASIC2.31□□□□□ -2.04
PRPF3O43395 RNA5SP57-201ENST00000459463 123 ntBASIC2.31□□□□□ -2.04
PRPF3O43395 TRBVB-201ENST00000477100 408 ntBASIC2.31□□□□□ -2.04
PRPF3O43395 RPS27P21-201ENST00000486977 252 ntBASIC2.31□□□□□ -2.04
PRPF3O43395 MRPS17P9-201ENST00000511924 393 ntBASIC2.31□□□□□ -2.04
PRPF3O43395 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.31□□□□□ -2.04
PRPF3O43395 DEFB117-201ENST00000602356 141 ntBASIC2.31□□□□□ -2.04
PRPF3O43395 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PRPF3O43395 RNU6-196P-201ENST00000384315 107 ntBASIC2.3□□□□□ -2.04
PRPF3O43395 RNU6-505P-201ENST00000384427 107 ntBASIC2.3□□□□□ -2.04
PRPF3O43395 Y_RNA.569-201ENST00000384749 103 ntBASIC2.3□□□□□ -2.04
PRPF3O43395 RNU6-360P-201ENST00000390944 104 ntBASIC2.3□□□□□ -2.04
PRPF3O43395 SNORA53-201ENST00000391141 249 ntBASIC2.3□□□□□ -2.04
PRPF3O43395 AL356379.1-201ENST00000414105 126 ntBASIC2.3□□□□□ -2.04
PRPF3O43395 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.3□□□□□ -2.04
PRPF3O43395 AC245047.4-201ENST00000433189 144 ntBASIC2.3□□□□□ -2.04
PRPF3O43395 AL161670.1-201ENST00000554348 137 ntBASIC2.3□□□□□ -2.04
PRPF3O43395 MIR3145-201ENST00000580727 82 ntBASIC2.3□□□□□ -2.04
PRPF3O43395 AC002984.1-201ENST00000591692 448 ntBASIC2.3□□□□□ -2.04
PRPF3O43395 AL162424.1-201ENST00000602325 221 ntBASIC2.3□□□□□ -2.04
PRPF3O43395 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.3□□□□□ -2.04
PRPF3O43395 AC018630.2-201ENST00000534866 2403 ntBASIC2.3□□□□□ -2.04
PRPF3O43395 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
PRPF3O43395 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.29□□□□□ -2.04
PRPF3O43395 AL596028.1-201ENST00000326971 197 ntBASIC2.29□□□□□ -2.04
PRPF3O43395 Y_RNA.144-201ENST00000363521 113 ntBASIC2.29□□□□□ -2.04
PRPF3O43395 MT-TW-201ENST00000387382 68 ntBASIC2.29□□□□□ -2.04
PRPF3O43395 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.29□□□□□ -2.04
PRPF3O43395 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.29□□□□□ -2.04
PRPF3O43395 AL163195.1-201ENST00000496941 348 ntBASIC2.29□□□□□ -2.04
PRPF3O43395 SNORA44.1-201ENST00000517031 108 ntBASIC2.29□□□□□ -2.04
PRPF3O43395 AL358944.1-201ENST00000528537 144 ntBASIC2.29□□□□□ -2.04
PRPF3O43395 AC022254.1-201ENST00000567857 235 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms