Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 Y_RNA.65-201ENST00000362846 100 ntBASIC2.25□□□□□ -2.05
PHGDHO43175 Y_RNA.489-201ENST00000384410 101 ntBASIC2.25□□□□□ -2.05
PHGDHO43175 RNU6-136P-201ENST00000384663 107 ntBASIC2.25□□□□□ -2.05
PHGDHO43175 RNU11-5P-201ENST00000391216 129 ntBASIC2.25□□□□□ -2.05
PHGDHO43175 MIR548H3-201ENST00000408771 118 ntBASIC2.25□□□□□ -2.05
PHGDHO43175 RPS20P10-201ENST00000451209 253 ntBASIC2.25□□□□□ -2.05
PHGDHO43175 TRBV12-1-201ENST00000479785 344 ntBASIC2.25□□□□□ -2.05
PHGDHO43175 AL163195.1-201ENST00000496941 348 ntBASIC2.25□□□□□ -2.05
PHGDHO43175 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.25□□□□□ -2.05
PHGDHO43175 MIR5007-201ENST00000583098 95 ntBASIC2.25□□□□□ -2.05
PHGDHO43175 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
PHGDHO43175 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
PHGDHO43175 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
PHGDHO43175 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
PHGDHO43175 ZNF702P-202ENST00000434269 1966 ntBASIC2.24□□□□□ -2.05
PHGDHO43175 Y_RNA.20-201ENST00000362479 113 ntBASIC2.24□□□□□ -2.05
PHGDHO43175 RNA5SP276-201ENST00000362580 94 ntBASIC2.24□□□□□ -2.05
PHGDHO43175 Y_RNA.76-201ENST00000362931 109 ntBASIC2.24□□□□□ -2.05
PHGDHO43175 RNU4-13P-201ENST00000364019 141 ntBASIC2.24□□□□□ -2.05
PHGDHO43175 SNORA16B-201ENST00000364674 135 ntBASIC2.24□□□□□ -2.05
PHGDHO43175 Y_RNA.310-201ENST00000365063 113 ntBASIC2.24□□□□□ -2.05
PHGDHO43175 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.24□□□□□ -2.05
PHGDHO43175 SNORA59A-201ENST00000459326 152 ntBASIC2.24□□□□□ -2.05
PHGDHO43175 UBE2DNL-203ENST00000474922 222 ntBASIC2.24□□□□□ -2.05
PHGDHO43175 AC084364.2-201ENST00000546924 395 ntBASIC2.24□□□□□ -2.05
PHGDHO43175 AC004832.4-201ENST00000608952 331 ntBASIC2.24□□□□□ -2.05
PHGDHO43175 AC131280.1-202ENST00000624067 4211 ntBASIC2.24□□□□□ -2.05
PHGDHO43175 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PHGDHO43175 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PHGDHO43175 RNU6-1048P-201ENST00000364054 107 ntBASIC2.23□□□□□ -2.05
PHGDHO43175 RNU6-801P-201ENST00000364087 105 ntBASIC2.23□□□□□ -2.05
PHGDHO43175 Y_RNA.269-201ENST00000364685 89 ntBASIC2.23□□□□□ -2.05
PHGDHO43175 RNU6-1289P-201ENST00000384431 106 ntBASIC2.23□□□□□ -2.05
PHGDHO43175 RNA5SP511-201ENST00000410487 115 ntBASIC2.23□□□□□ -2.05
PHGDHO43175 RNU2-14P-201ENST00000411053 191 ntBASIC2.23□□□□□ -2.05
PHGDHO43175 AC245047.4-201ENST00000433189 144 ntBASIC2.23□□□□□ -2.05
PHGDHO43175 HSPE1P21-201ENST00000438283 308 ntBASIC2.23□□□□□ -2.05
PHGDHO43175 RPS26P45-201ENST00000471748 340 ntBASIC2.23□□□□□ -2.05
PHGDHO43175 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.23□□□□□ -2.05
PHGDHO43175 RNA5SP24-201ENST00000516478 95 ntBASIC2.23□□□□□ -2.05
PHGDHO43175 AC136628.3-201ENST00000521868 290 ntBASIC2.23□□□□□ -2.05
PHGDHO43175 AC015720.1-201ENST00000565251 277 ntBASIC2.23□□□□□ -2.05
PHGDHO43175 MIR4513-201ENST00000581077 86 ntBASIC2.23□□□□□ -2.05
PHGDHO43175 MIR4672-201ENST00000583126 81 ntBASIC2.23□□□□□ -2.05
PHGDHO43175 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.23□□□□□ -2.05
PHGDHO43175 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.23□□□□□ -2.05
PHGDHO43175 CTSLP2-204ENST00000629029 392 ntBASIC2.23□□□□□ -2.05
PHGDHO43175 snoU18.1-201ENST00000629629 71 ntBASIC2.23□□□□□ -2.05
PHGDHO43175 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
PHGDHO43175 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
PHGDHO43175 UBE2WP1-201ENST00000362030 340 ntBASIC2.22□□□□□ -2.05
PHGDHO43175 Y_RNA.275-201ENST00000364726 110 ntBASIC2.22□□□□□ -2.05
PHGDHO43175 RNU6-1318P-201ENST00000365389 103 ntBASIC2.22□□□□□ -2.05
PHGDHO43175 Y_RNA.478-201ENST00000384358 107 ntBASIC2.22□□□□□ -2.05
PHGDHO43175 AL162725.1-201ENST00000435405 301 ntBASIC2.22□□□□□ -2.05
PHGDHO43175 AC069257.2-201ENST00000441819 155 ntBASIC2.22□□□□□ -2.05
PHGDHO43175 SUB1P4-201ENST00000566062 339 ntBASIC2.22□□□□□ -2.05
PHGDHO43175 AC005972.2-201ENST00000604690 348 ntBASIC2.22□□□□□ -2.05
PHGDHO43175 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.22□□□□□ -2.05
PHGDHO43175 MIR6079-201ENST00000635807 62 ntBASIC2.22□□□□□ -2.05
PHGDHO43175 MIR203B-201ENST00000636080 86 ntBASIC2.22□□□□□ -2.05
PHGDHO43175 AC068647.2-201ENST00000637380 353 ntBASIC2.22□□□□□ -2.05
PHGDHO43175 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
PHGDHO43175 AC134026.1-201ENST00000623249 2239 ntBASIC2.22□□□□□ -2.05
PHGDHO43175 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
PHGDHO43175 AC018630.2-201ENST00000534866 2403 ntBASIC2.21□□□□□ -2.06
PHGDHO43175 AC068700.1-201ENST00000565862 3754 ntBASIC2.21□□□□□ -2.06
PHGDHO43175 RNA5SP289-201ENST00000362332 137 ntBASIC2.21□□□□□ -2.06
PHGDHO43175 Y_RNA.217-201ENST00000364214 105 ntBASIC2.21□□□□□ -2.06
PHGDHO43175 SNORA72.4-201ENST00000384174 132 ntBASIC2.21□□□□□ -2.06
PHGDHO43175 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.21□□□□□ -2.06
PHGDHO43175 BTF3P11-201ENST00000426582 477 ntBASIC2.21□□□□□ -2.06
PHGDHO43175 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.21□□□□□ -2.06
PHGDHO43175 U8.19-201ENST00000459095 133 ntBASIC2.21□□□□□ -2.06
PHGDHO43175 Y_RNA.641-201ENST00000459414 105 ntBASIC2.21□□□□□ -2.06
PHGDHO43175 Y_RNA.637-201ENST00000459424 114 ntBASIC2.21□□□□□ -2.06
PHGDHO43175 RNA5SP57-201ENST00000459463 123 ntBASIC2.21□□□□□ -2.06
PHGDHO43175 RNU7-94P-201ENST00000459576 63 ntBASIC2.21□□□□□ -2.06
PHGDHO43175 AC091021.1-201ENST00000468051 388 ntBASIC2.21□□□□□ -2.06
PHGDHO43175 AC104435.1-201ENST00000483483 166 ntBASIC2.21□□□□□ -2.06
PHGDHO43175 RPL36AP21-201ENST00000490372 323 ntBASIC2.21□□□□□ -2.06
PHGDHO43175 IGLV3-17-201ENST00000519099 244 ntBASIC2.21□□□□□ -2.06
PHGDHO43175 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PHGDHO43175 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PHGDHO43175 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PHGDHO43175 Y_RNA.122-201ENST00000363331 96 ntBASIC2.2□□□□□ -2.06
PHGDHO43175 MIR520G-201ENST00000385064 90 ntBASIC2.2□□□□□ -2.06
PHGDHO43175 MIR221-201ENST00000385135 110 ntBASIC2.2□□□□□ -2.06
PHGDHO43175 RNU6-763P-201ENST00000390865 106 ntBASIC2.2□□□□□ -2.06
PHGDHO43175 SNORA26.5-201ENST00000391215 123 ntBASIC2.2□□□□□ -2.06
PHGDHO43175 RNU2-7P-201ENST00000410794 178 ntBASIC2.2□□□□□ -2.06
PHGDHO43175 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.2□□□□□ -2.06
PHGDHO43175 SNORD116-28-201ENST00000516123 91 ntBASIC2.2□□□□□ -2.06
PHGDHO43175 RNA5SP281-201ENST00000516504 135 ntBASIC2.2□□□□□ -2.06
PHGDHO43175 MIR4287-201ENST00000579398 78 ntBASIC2.2□□□□□ -2.06
PHGDHO43175 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.2□□□□□ -2.06
PHGDHO43175 AL162424.1-201ENST00000602325 221 ntBASIC2.2□□□□□ -2.06
PHGDHO43175 BX284668.6-201ENST00000606899 438 ntBASIC2.2□□□□□ -2.06
PHGDHO43175 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.2□□□□□ -2.06
PHGDHO43175 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms