Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 FGF7P4-201ENST00000509595 295 ntBASIC1.78□□□□□ -2.12
NPHP1O15259 RNA5SP220-201ENST00000516298 104 ntBASIC1.78□□□□□ -2.12
NPHP1O15259 AC091178.2-201ENST00000584401 117 ntBASIC1.78□□□□□ -2.12
NPHP1O15259 MTND5P10-201ENST00000603719 1809 ntBASIC1.77□□□□□ -2.13
NPHP1O15259 RNU6-961P-201ENST00000363893 105 ntBASIC1.77□□□□□ -2.13
NPHP1O15259 RNY3P11-201ENST00000364153 102 ntBASIC1.77□□□□□ -2.13
NPHP1O15259 Y_RNA.243-201ENST00000364481 109 ntBASIC1.77□□□□□ -2.13
NPHP1O15259 RNY3P4-201ENST00000384428 101 ntBASIC1.77□□□□□ -2.13
NPHP1O15259 RNU6-1065P-201ENST00000384513 106 ntBASIC1.77□□□□□ -2.13
NPHP1O15259 MIR873-201ENST00000401120 77 ntBASIC1.77□□□□□ -2.13
NPHP1O15259 RNU6-955P-201ENST00000410497 104 ntBASIC1.77□□□□□ -2.13
NPHP1O15259 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.77□□□□□ -2.13
NPHP1O15259 SUMO1P2-201ENST00000452524 304 ntBASIC1.77□□□□□ -2.13
NPHP1O15259 RNU7-169P-201ENST00000459456 61 ntBASIC1.77□□□□□ -2.13
NPHP1O15259 RNU6-507P-201ENST00000516045 100 ntBASIC1.77□□□□□ -2.13
NPHP1O15259 Y_RNA.718-201ENST00000517110 102 ntBASIC1.77□□□□□ -2.13
NPHP1O15259 SUMO2P16-201ENST00000519475 264 ntBASIC1.77□□□□□ -2.13
NPHP1O15259 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.77□□□□□ -2.13
NPHP1O15259 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.77□□□□□ -2.13
NPHP1O15259 RPL21P9-201ENST00000556149 474 ntBASIC1.77□□□□□ -2.13
NPHP1O15259 AL162424.1-201ENST00000602325 221 ntBASIC1.77□□□□□ -2.13
NPHP1O15259 AL021879.1-201ENST00000611756 288 ntBASIC1.77□□□□□ -2.13
NPHP1O15259 AL513423.1-201ENST00000621695 132 ntBASIC1.77□□□□□ -2.13
NPHP1O15259 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
NPHP1O15259 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.77□□□□□ -2.13
NPHP1O15259 Y_RNA.124-201ENST00000363339 93 ntBASIC1.76□□□□□ -2.13
NPHP1O15259 Y_RNA.384-201ENST00000383909 102 ntBASIC1.76□□□□□ -2.13
NPHP1O15259 RNU6-1009P-201ENST00000390996 107 ntBASIC1.76□□□□□ -2.13
NPHP1O15259 SNX2P2-201ENST00000424553 323 ntBASIC1.76□□□□□ -2.13
NPHP1O15259 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.76□□□□□ -2.13
NPHP1O15259 AL135790.2-201ENST00000437701 267 ntBASIC1.76□□□□□ -2.13
NPHP1O15259 AC091021.1-201ENST00000468051 388 ntBASIC1.76□□□□□ -2.13
NPHP1O15259 Y_RNA.702-201ENST00000516843 96 ntBASIC1.76□□□□□ -2.13
NPHP1O15259 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.76□□□□□ -2.13
NPHP1O15259 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
NPHP1O15259 RNU6-490P-201ENST00000362985 107 ntBASIC1.75□□□□□ -2.13
NPHP1O15259 Y_RNA.263-201ENST00000364659 114 ntBASIC1.75□□□□□ -2.13
NPHP1O15259 RNU6-117P-201ENST00000365415 107 ntBASIC1.75□□□□□ -2.13
NPHP1O15259 AC099799.1-201ENST00000439809 192 ntBASIC1.75□□□□□ -2.13
NPHP1O15259 AC093019.1-201ENST00000443135 252 ntBASIC1.75□□□□□ -2.13
NPHP1O15259 STAG3L5P-204ENST00000443759 179 ntBASIC1.75□□□□□ -2.13
NPHP1O15259 FCF1P4-201ENST00000448326 183 ntBASIC1.75□□□□□ -2.13
NPHP1O15259 RNU6-1278P-201ENST00000516130 107 ntBASIC1.75□□□□□ -2.13
NPHP1O15259 RNU6-341P-201ENST00000516973 96 ntBASIC1.75□□□□□ -2.13
NPHP1O15259 AC023442.1-201ENST00000531247 422 ntBASIC1.75□□□□□ -2.13
NPHP1O15259 AC011604.1-201ENST00000545978 196 ntBASIC1.75□□□□□ -2.13
NPHP1O15259 AC004467.1-201ENST00000615678 330 ntBASIC1.75□□□□□ -2.13
NPHP1O15259 AC138305.3-201ENST00000624988 240 ntBASIC1.75□□□□□ -2.13
NPHP1O15259 SNORD114-7-201ENST00000362520 77 ntBASIC1.74□□□□□ -2.13
NPHP1O15259 U8.1-201ENST00000362843 134 ntBASIC1.74□□□□□ -2.13
NPHP1O15259 Y_RNA.314-201ENST00000365114 102 ntBASIC1.74□□□□□ -2.13
NPHP1O15259 RNU6-53P-201ENST00000365367 106 ntBASIC1.74□□□□□ -2.13
NPHP1O15259 Y_RNA.361-201ENST00000365515 120 ntBASIC1.74□□□□□ -2.13
NPHP1O15259 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.74□□□□□ -2.13
NPHP1O15259 RNU6-1040P-201ENST00000383974 107 ntBASIC1.74□□□□□ -2.13
NPHP1O15259 RNU6-926P-201ENST00000384075 107 ntBASIC1.74□□□□□ -2.13
NPHP1O15259 SNORD26-201ENST00000384147 75 ntBASIC1.74□□□□□ -2.13
NPHP1O15259 RNU6-376P-201ENST00000384731 106 ntBASIC1.74□□□□□ -2.13
NPHP1O15259 Y_RNA.605-201ENST00000410577 105 ntBASIC1.74□□□□□ -2.13
NPHP1O15259 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.74□□□□□ -2.13
NPHP1O15259 RNU6-911P-201ENST00000516523 104 ntBASIC1.74□□□□□ -2.13
NPHP1O15259 RNU2-12P-201ENST00000517216 168 ntBASIC1.74□□□□□ -2.13
NPHP1O15259 AC055872.1-201ENST00000570978 278 ntBASIC1.74□□□□□ -2.13
NPHP1O15259 AL355375.2-201ENST00000574825 175 ntBASIC1.74□□□□□ -2.13
NPHP1O15259 SNORA28-201ENST00000606769 126 ntBASIC1.74□□□□□ -2.13
NPHP1O15259 AC073349.3-201ENST00000617616 186 ntBASIC1.74□□□□□ -2.13
NPHP1O15259 AC127459.3-201ENST00000624328 466 ntBASIC1.74□□□□□ -2.13
NPHP1O15259 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
NPHP1O15259 Y_RNA.70-201ENST00000362886 110 ntBASIC1.73□□□□□ -2.13
NPHP1O15259 SNORD114-22-201ENST00000365423 72 ntBASIC1.73□□□□□ -2.13
NPHP1O15259 Y_RNA.529-201ENST00000384586 119 ntBASIC1.73□□□□□ -2.13
NPHP1O15259 MTATP6P23-201ENST00000440153 476 ntBASIC1.73□□□□□ -2.13
NPHP1O15259 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.73□□□□□ -2.13
NPHP1O15259 RNU7-152P-201ENST00000458982 64 ntBASIC1.73□□□□□ -2.13
NPHP1O15259 RNU6-699P-201ENST00000517081 110 ntBASIC1.73□□□□□ -2.13
NPHP1O15259 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.73□□□□□ -2.13
NPHP1O15259 AL512310.8-201ENST00000550183 120 ntBASIC1.73□□□□□ -2.13
NPHP1O15259 U2.1-201ENST00000618978 145 ntBASIC1.73□□□□□ -2.13
NPHP1O15259 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.73□□□□□ -2.13
NPHP1O15259 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.73□□□□□ -2.13
NPHP1O15259 SNORD115-30-201ENST00000364117 82 ntBASIC1.72□□□□□ -2.13
NPHP1O15259 MIR562-201ENST00000384894 95 ntBASIC1.72□□□□□ -2.13
NPHP1O15259 MIR660-201ENST00000385235 97 ntBASIC1.72□□□□□ -2.13
NPHP1O15259 SNORD78.2-201ENST00000391076 69 ntBASIC1.72□□□□□ -2.13
NPHP1O15259 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.72□□□□□ -2.13
NPHP1O15259 Y_RNA.632-201ENST00000459189 102 ntBASIC1.72□□□□□ -2.13
NPHP1O15259 RPL30P7-201ENST00000479312 323 ntBASIC1.72□□□□□ -2.13
NPHP1O15259 RNU6-1012P-201ENST00000516606 109 ntBASIC1.72□□□□□ -2.13
NPHP1O15259 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.72□□□□□ -2.13
NPHP1O15259 AC136443.5-201ENST00000603741 370 ntBASIC1.72□□□□□ -2.13
NPHP1O15259 SNORD3E-202ENST00000627253 216 ntBASIC1.72□□□□□ -2.13
NPHP1O15259 Y_RNA.267-201ENST00000364679 109 ntBASIC1.71□□□□□ -2.14
NPHP1O15259 Y_RNA.356-201ENST00000365475 113 ntBASIC1.71□□□□□ -2.14
NPHP1O15259 RNU5A-5P-201ENST00000411054 116 ntBASIC1.71□□□□□ -2.14
NPHP1O15259 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.71□□□□□ -2.14
NPHP1O15259 RNU2-56P-201ENST00000516826 190 ntBASIC1.71□□□□□ -2.14
NPHP1O15259 PRR13P7-201ENST00000605538 430 ntBASIC1.71□□□□□ -2.14
NPHP1O15259 AC084781.2-201ENST00000615568 161 ntBASIC1.71□□□□□ -2.14
NPHP1O15259 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
NPHP1O15259 SNORA1B-201ENST00000362535 133 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms