Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RNU6-95P-201ENST00000384697 107 ntBASIC0.03□□□□□ -2.4
SDCBPO00560 MIR520H-201ENST00000385126 88 ntBASIC0.03□□□□□ -2.4
SDCBPO00560 MIR136-201ENST00000385207 82 ntBASIC0.03□□□□□ -2.4
SDCBPO00560 RNU6-613P-201ENST00000410412 108 ntBASIC0.03□□□□□ -2.4
SDCBPO00560 AC243428.1-201ENST00000421099 264 ntBASIC0.03□□□□□ -2.4
SDCBPO00560 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.03□□□□□ -2.4
SDCBPO00560 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.03□□□□□ -2.4
SDCBPO00560 AC015818.7-201ENST00000428754 109 ntBASIC0.03□□□□□ -2.4
SDCBPO00560 AC087499.7-201ENST00000441958 109 ntBASIC0.03□□□□□ -2.4
SDCBPO00560 SNORD123-201ENST00000459473 70 ntBASIC0.03□□□□□ -2.4
SDCBPO00560 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.03□□□□□ -2.4
SDCBPO00560 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.03□□□□□ -2.4
SDCBPO00560 Y_RNA.683-201ENST00000516508 93 ntBASIC0.03□□□□□ -2.4
SDCBPO00560 RNU7-43P-201ENST00000516554 64 ntBASIC0.03□□□□□ -2.4
SDCBPO00560 MIR4762-201ENST00000585261 75 ntBASIC0.03□□□□□ -2.4
SDCBPO00560 POLR3GP2-201ENST00000588366 668 ntBASIC0.03□□□□□ -2.4
SDCBPO00560 AC022960.3-201ENST00000619794 441 ntBASIC0.03□□□□□ -2.4
SDCBPO00560 AC078938.1-201ENST00000620993 318 ntBASIC0.03□□□□□ -2.4
SDCBPO00560 AC092634.7-201ENST00000621022 103 ntBASIC0.03□□□□□ -2.4
SDCBPO00560 U6.115-201ENST00000636045 103 ntBASIC0.03□□□□□ -2.4
SDCBPO00560 AC010487.4-201ENST00000637027 61 ntBASIC0.03□□□□□ -2.4
SDCBPO00560 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
SDCBPO00560 RNU6-254P-201ENST00000363377 107 ntBASIC0.02□□□□□ -2.41
SDCBPO00560 Y_RNA.169-201ENST00000363745 96 ntBASIC0.02□□□□□ -2.41
SDCBPO00560 RNU6-454P-201ENST00000364292 107 ntBASIC0.02□□□□□ -2.41
SDCBPO00560 Y_RNA.269-201ENST00000364685 89 ntBASIC0.02□□□□□ -2.41
SDCBPO00560 MIR518A1-201ENST00000385068 85 ntBASIC0.02□□□□□ -2.41
SDCBPO00560 RNU6-1001P-201ENST00000411265 100 ntBASIC0.02□□□□□ -2.41
SDCBPO00560 AL354751.2-201ENST00000415471 210 ntBASIC0.02□□□□□ -2.41
SDCBPO00560 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.02□□□□□ -2.41
SDCBPO00560 PCMTD1P1-201ENST00000455560 355 ntBASIC0.02□□□□□ -2.41
SDCBPO00560 AC074133.1-201ENST00000515696 183 ntBASIC0.02□□□□□ -2.41
SDCBPO00560 RNU6-863P-201ENST00000515989 104 ntBASIC0.02□□□□□ -2.41
SDCBPO00560 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.02□□□□□ -2.41
SDCBPO00560 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.02□□□□□ -2.41
SDCBPO00560 AC093027.1-201ENST00000546698 429 ntBASIC0.02□□□□□ -2.41
SDCBPO00560 MIR5696-201ENST00000578474 85 ntBASIC0.02□□□□□ -2.41
SDCBPO00560 LARP7P1-201ENST00000605576 316 ntBASIC0.02□□□□□ -2.41
SDCBPO00560 AC005828.6-201ENST00000606610 232 ntBASIC0.02□□□□□ -2.41
SDCBPO00560 AF250324.2-201ENST00000608299 610 ntBASIC0.02□□□□□ -2.41
SDCBPO00560 AC104260.1-201ENST00000616660 539 ntBASIC0.02□□□□□ -2.41
SDCBPO00560 AC099654.12-201ENST00000639868 649 ntBASIC0.02□□□□□ -2.41
SDCBPO00560 AC121333.1-201ENST00000567488 2709 ntBASIC0.02□□□□□ -2.41
SDCBPO00560 Y_RNA.1-201ENST00000352915 104 ntBASIC0.01□□□□□ -2.41
SDCBPO00560 Y_RNA.168-201ENST00000363740 102 ntBASIC0.01□□□□□ -2.41
SDCBPO00560 RNU4-67P-201ENST00000364569 141 ntBASIC0.01□□□□□ -2.41
SDCBPO00560 SNORA72.3-201ENST00000365074 132 ntBASIC0.01□□□□□ -2.41
SDCBPO00560 RNU6-1264P-201ENST00000383891 107 ntBASIC0.01□□□□□ -2.41
SDCBPO00560 RNU6-815P-201ENST00000384080 113 ntBASIC0.01□□□□□ -2.41
SDCBPO00560 SNORD28B-201ENST00000390993 75 ntBASIC0.01□□□□□ -2.41
SDCBPO00560 MIR873-201ENST00000401120 77 ntBASIC0.01□□□□□ -2.41
SDCBPO00560 MTCYBP4-201ENST00000401524 249 ntBASIC0.01□□□□□ -2.41
SDCBPO00560 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.01□□□□□ -2.41
SDCBPO00560 MTND3P23-201ENST00000431980 347 ntBASIC0.01□□□□□ -2.41
SDCBPO00560 AC134698.4-201ENST00000523451 826 ntBASIC0.01□□□□□ -2.41
SDCBPO00560 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.01□□□□□ -2.41
SDCBPO00560 AC022523.2-201ENST00000561045 150 ntBASIC0.01□□□□□ -2.41
SDCBPO00560 AC125232.2-201ENST00000592457 143 ntBASIC0.01□□□□□ -2.41
SDCBPO00560 MIR4251-201ENST00000635819 61 ntBASIC0.01□□□□□ -2.41
SDCBPO00560 SNORA69-201ENST00000383895 132 ntBASIC0□□□□□ -2.41
SDCBPO00560 Y_RNA.405-201ENST00000383979 100 ntBASIC0□□□□□ -2.41
SDCBPO00560 Y_RNA.451-201ENST00000384200 100 ntBASIC0□□□□□ -2.41
SDCBPO00560 Y_RNA.524-201ENST00000384564 100 ntBASIC0□□□□□ -2.41
SDCBPO00560 Y_RNA.561-201ENST00000384694 100 ntBASIC0□□□□□ -2.41
SDCBPO00560 MIR520F-201ENST00000384824 87 ntBASIC0□□□□□ -2.41
SDCBPO00560 MIR517A-201ENST00000385001 87 ntBASIC0□□□□□ -2.41
SDCBPO00560 MTATP6P19-201ENST00000413797 659 ntBASIC0□□□□□ -2.41
SDCBPO00560 MTND1P4-201ENST00000435196 415 ntBASIC0□□□□□ -2.41
SDCBPO00560 AC092989.1-201ENST00000481235 277 ntBASIC0□□□□□ -2.41
SDCBPO00560 AC093534.1-201ENST00000504977 132 ntBASIC0□□□□□ -2.41
SDCBPO00560 SNORA25.10-201ENST00000515926 124 ntBASIC0□□□□□ -2.41
SDCBPO00560 SNORA62.5-201ENST00000516634 120 ntBASIC0□□□□□ -2.41
SDCBPO00560 AC093023.1-201ENST00000547375 507 ntBASIC0□□□□□ -2.41
SDCBPO00560 RBM11P1-201ENST00000604951 799 ntBASIC0□□□□□ -2.41
SDCBPO00560 SNORA25.18-201ENST00000607153 114 ntBASIC0□□□□□ -2.41
SDCBPO00560 AL355073.2-201ENST00000612106 557 ntBASIC0□□□□□ -2.41
SDCBPO00560 AC091931.1-201ENST00000623488 728 ntBASIC0□□□□□ -2.41
SDCBPO00560 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.01□□□□□ -2.41
SDCBPO00560 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.01□□□□□ -2.41
SDCBPO00560 SNORD45.3-201ENST00000363836 72 ntBASIC-0.01□□□□□ -2.41
SDCBPO00560 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.01□□□□□ -2.41
SDCBPO00560 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.01□□□□□ -2.41
SDCBPO00560 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.01□□□□□ -2.41
SDCBPO00560 RNU6-679P-201ENST00000391003 106 ntBASIC-0.01□□□□□ -2.41
SDCBPO00560 RNU6-648P-201ENST00000410190 107 ntBASIC-0.01□□□□□ -2.41
SDCBPO00560 RN7SKP142-201ENST00000411236 328 ntBASIC-0.01□□□□□ -2.41
SDCBPO00560 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.01□□□□□ -2.41
SDCBPO00560 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.01□□□□□ -2.41
SDCBPO00560 AC005534.2-201ENST00000431047 433 ntBASIC-0.01□□□□□ -2.41
SDCBPO00560 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-0.01□□□□□ -2.41
SDCBPO00560 ELOCP24-201ENST00000456370 334 ntBASIC-0.01□□□□□ -2.41
SDCBPO00560 AC083798.1-201ENST00000472671 131 ntBASIC-0.01□□□□□ -2.41
SDCBPO00560 MTND3P7-201ENST00000474435 343 ntBASIC-0.01□□□□□ -2.41
SDCBPO00560 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.01□□□□□ -2.41
SDCBPO00560 SNORA25.12-201ENST00000516202 82 ntBASIC-0.01□□□□□ -2.41
SDCBPO00560 RNU6-835P-201ENST00000516974 104 ntBASIC-0.01□□□□□ -2.41
SDCBPO00560 MIR548AR-201ENST00000582191 57 ntBASIC-0.01□□□□□ -2.41
SDCBPO00560 AC023932.2-201ENST00000603176 175 ntBASIC-0.01□□□□□ -2.41
SDCBPO00560 RNU6-89P-201ENST00000606519 100 ntBASIC-0.01□□□□□ -2.41
SDCBPO00560 AP001330.5-201ENST00000607176 411 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms