Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MIR1304-201ENST00000408243 91 ntBASIC1.58□□□□□ -2.16
O00370 MIR1267-201ENST00000408723 78 ntBASIC1.58□□□□□ -2.16
O00370 RNU4-62P-201ENST00000410125 130 ntBASIC1.58□□□□□ -2.16
O00370 COX6CP10-201ENST00000416832 224 ntBASIC1.58□□□□□ -2.16
O00370 BTF3P4-201ENST00000418852 495 ntBASIC1.58□□□□□ -2.16
O00370 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.58□□□□□ -2.16
O00370 AC069257.2-201ENST00000441819 155 ntBASIC1.58□□□□□ -2.16
O00370 HSPE1P24-201ENST00000450782 238 ntBASIC1.58□□□□□ -2.16
O00370 RNU6-1053P-201ENST00000515930 101 ntBASIC1.58□□□□□ -2.16
O00370 RNA5SP20-201ENST00000515976 84 ntBASIC1.58□□□□□ -2.16
O00370 RNU7-172P-201ENST00000517125 64 ntBASIC1.58□□□□□ -2.16
O00370 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.58□□□□□ -2.16
O00370 MIR3171-201ENST00000584270 74 ntBASIC1.58□□□□□ -2.16
O00370 U6.73-201ENST00000619194 103 ntBASIC1.58□□□□□ -2.16
O00370 AC134503.1-201ENST00000633048 54 ntBASIC1.58□□□□□ -2.16
O00370 Y_RNA.28-201ENST00000362554 111 ntBASIC1.57□□□□□ -2.16
O00370 Y_RNA.128-201ENST00000363391 112 ntBASIC1.57□□□□□ -2.16
O00370 Y_RNA.143-201ENST00000363520 106 ntBASIC1.57□□□□□ -2.16
O00370 RNU1-42P-201ENST00000364033 160 ntBASIC1.57□□□□□ -2.16
O00370 RNU4-50P-201ENST00000364361 141 ntBASIC1.57□□□□□ -2.16
O00370 RNU6-136P-201ENST00000384663 107 ntBASIC1.57□□□□□ -2.16
O00370 MRPL35P1-201ENST00000404272 572 ntBASIC1.57□□□□□ -2.16
O00370 RNA5SP247-201ENST00000411181 105 ntBASIC1.57□□□□□ -2.16
O00370 AC010154.1-201ENST00000425857 269 ntBASIC1.57□□□□□ -2.16
O00370 AL606517.2-201ENST00000442855 241 ntBASIC1.57□□□□□ -2.16
O00370 AC097462.1-201ENST00000514125 324 ntBASIC1.57□□□□□ -2.16
O00370 RNU7-110P-201ENST00000516891 62 ntBASIC1.57□□□□□ -2.16
O00370 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.57□□□□□ -2.16
O00370 AC015720.1-201ENST00000565251 277 ntBASIC1.57□□□□□ -2.16
O00370 AL356055.1-201ENST00000602528 446 ntBASIC1.57□□□□□ -2.16
O00370 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
O00370 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
O00370 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
O00370 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
O00370 AC100821.1-201ENST00000523153 2479 ntBASIC1.56□□□□□ -2.16
O00370 SNORA27.1-201ENST00000362604 124 ntBASIC1.56□□□□□ -2.16
O00370 RNU6-271P-201ENST00000363858 105 ntBASIC1.56□□□□□ -2.16
O00370 RNU6-1175P-201ENST00000365200 107 ntBASIC1.56□□□□□ -2.16
O00370 Y_RNA.439-201ENST00000384119 94 ntBASIC1.56□□□□□ -2.16
O00370 Y_RNA.458-201ENST00000384240 102 ntBASIC1.56□□□□□ -2.16
O00370 RNU6-937P-201ENST00000384325 106 ntBASIC1.56□□□□□ -2.16
O00370 RNU6-101P-201ENST00000410323 104 ntBASIC1.56□□□□□ -2.16
O00370 AL354751.2-201ENST00000415471 210 ntBASIC1.56□□□□□ -2.16
O00370 AL354695.1-201ENST00000427935 228 ntBASIC1.56□□□□□ -2.16
O00370 AC245047.3-201ENST00000429428 127 ntBASIC1.56□□□□□ -2.16
O00370 AC023790.1-201ENST00000482174 347 ntBASIC1.56□□□□□ -2.16
O00370 RNA5SP61-201ENST00000516453 100 ntBASIC1.56□□□□□ -2.16
O00370 RNU6-63P-201ENST00000516690 95 ntBASIC1.56□□□□□ -2.16
O00370 Y_RNA.701-201ENST00000516812 110 ntBASIC1.56□□□□□ -2.16
O00370 SNORA31.24-201ENST00000517232 57 ntBASIC1.56□□□□□ -2.16
O00370 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.56□□□□□ -2.16
O00370 AC024995.1-201ENST00000523014 93 ntBASIC1.56□□□□□ -2.16
O00370 MIR4422-201ENST00000581938 83 ntBASIC1.56□□□□□ -2.16
O00370 AL121655.1-201ENST00000605811 308 ntBASIC1.56□□□□□ -2.16
O00370 snoU13.31-201ENST00000607291 104 ntBASIC1.56□□□□□ -2.16
O00370 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.56□□□□□ -2.16
O00370 MIR410-201ENST00000362222 80 ntBASIC1.55□□□□□ -2.16
O00370 Y_RNA.267-201ENST00000364679 109 ntBASIC1.55□□□□□ -2.16
O00370 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.55□□□□□ -2.16
O00370 Y_RNA.446-201ENST00000384178 104 ntBASIC1.55□□□□□ -2.16
O00370 MIR873-201ENST00000401120 77 ntBASIC1.55□□□□□ -2.16
O00370 MRPL42P3-201ENST00000401492 326 ntBASIC1.55□□□□□ -2.16
O00370 AL031003.1-201ENST00000404229 172 ntBASIC1.55□□□□□ -2.16
O00370 MIR1302-11-201ENST00000408051 138 ntBASIC1.55□□□□□ -2.16
O00370 MIR1302-9-201ENST00000408365 138 ntBASIC1.55□□□□□ -2.16
O00370 MIR1302-10-201ENST00000408734 138 ntBASIC1.55□□□□□ -2.16
O00370 RNU4-30P-201ENST00000410245 143 ntBASIC1.55□□□□□ -2.16
O00370 RPEP5-201ENST00000441137 268 ntBASIC1.55□□□□□ -2.16
O00370 snoU13.27-201ENST00000459278 104 ntBASIC1.55□□□□□ -2.16
O00370 U8.20-201ENST00000459445 131 ntBASIC1.55□□□□□ -2.16
O00370 AL163540.1-201ENST00000485382 386 ntBASIC1.55□□□□□ -2.16
O00370 RNU6-966P-201ENST00000516479 104 ntBASIC1.55□□□□□ -2.16
O00370 RPL21P9-201ENST00000556149 474 ntBASIC1.55□□□□□ -2.16
O00370 MIR4709-201ENST00000577272 72 ntBASIC1.55□□□□□ -2.16
O00370 MIR1302-2-201ENST00000607096 138 ntBASIC1.55□□□□□ -2.16
O00370 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.55□□□□□ -2.16
O00370 AC040896.1-201ENST00000613819 479 ntBASIC1.55□□□□□ -2.16
O00370 MIR8063-201ENST00000621930 81 ntBASIC1.55□□□□□ -2.16
O00370 U6.108-201ENST00000637764 58 ntBASIC1.55□□□□□ -2.16
O00370 Y_RNA.11-201ENST00000362375 109 ntBASIC1.54□□□□□ -2.16
O00370 RNU1-22P-201ENST00000363334 158 ntBASIC1.54□□□□□ -2.16
O00370 SNORD115-30-201ENST00000364117 82 ntBASIC1.54□□□□□ -2.16
O00370 SNORA63D-201ENST00000364359 132 ntBASIC1.54□□□□□ -2.16
O00370 Y_RNA.331-201ENST00000365267 102 ntBASIC1.54□□□□□ -2.16
O00370 RNU6-505P-201ENST00000384427 107 ntBASIC1.54□□□□□ -2.16
O00370 Y_RNA.527-201ENST00000384573 102 ntBASIC1.54□□□□□ -2.16
O00370 RNU6-21P-201ENST00000384710 107 ntBASIC1.54□□□□□ -2.16
O00370 RPL21P1-201ENST00000399532 476 ntBASIC1.54□□□□□ -2.16
O00370 RNU2-54P-201ENST00000410299 190 ntBASIC1.54□□□□□ -2.16
O00370 RNU6-1278P-201ENST00000516130 107 ntBASIC1.54□□□□□ -2.16
O00370 RNU7-99P-201ENST00000516271 62 ntBASIC1.54□□□□□ -2.16
O00370 RNA5SP481-201ENST00000516814 122 ntBASIC1.54□□□□□ -2.16
O00370 Y_RNA.711-201ENST00000516993 102 ntBASIC1.54□□□□□ -2.16
O00370 RNU2-12P-201ENST00000517216 168 ntBASIC1.54□□□□□ -2.16
O00370 RNU7-128P-201ENST00000517247 62 ntBASIC1.54□□□□□ -2.16
O00370 MIR4781-201ENST00000585250 76 ntBASIC1.54□□□□□ -2.16
O00370 AL929325.1-201ENST00000603096 117 ntBASIC1.54□□□□□ -2.16
O00370 AL021879.1-201ENST00000611756 288 ntBASIC1.54□□□□□ -2.16
O00370 MIR7974-201ENST00000615835 79 ntBASIC1.54□□□□□ -2.16
O00370 AC022140.2-201ENST00000623500 188 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 730.8 ms