Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 Y_RNA.498-201ENST00000384460 102 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 MIR215-201ENST00000384858 110 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 MRPL42P3-201ENST00000401492 326 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 RNU6-1186P-201ENST00000410429 97 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 RPL21P38-201ENST00000418090 167 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 AC010154.1-201ENST00000425857 269 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 AC245102.2-201ENST00000448956 180 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 RPS27P1-201ENST00000450552 247 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 AC005908.1-201ENST00000468701 347 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 RNU6-948P-201ENST00000516374 107 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 RNU6-1198P-201ENST00000516904 67 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 RNU2-12P-201ENST00000517216 168 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 SUMO2P18-201ENST00000518873 252 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 AC084364.2-201ENST00000546924 395 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 MIR4498-201ENST00000577599 66 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 AC022432.1-201ENST00000595739 310 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 AC022217.4-201ENST00000604389 163 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 AL512598.1-201ENST00000610158 273 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 AC068700.1-201ENST00000565862 3754 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 ZNF209P-201ENST00000593450 2304 ntBASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 MIR424-201ENST00000362227 98 ntBASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 Y_RNA.128-201ENST00000363391 112 ntBASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 RNU6-407P-201ENST00000365280 104 ntBASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 Y_RNA.431-201ENST00000384086 102 ntBASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 RNU6-136P-201ENST00000384663 107 ntBASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 MIR1302-11-201ENST00000408051 138 ntBASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 MIR1302-9-201ENST00000408365 138 ntBASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 MIR320B2-201ENST00000408479 138 ntBASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 MIR1302-10-201ENST00000408734 138 ntBASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 ELOCP20-201ENST00000422460 345 ntBASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 AC113195.1-201ENST00000579952 141 ntBASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 AC124312.5-201ENST00000604451 268 ntBASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 RPL17P51-201ENST00000605218 238 ntBASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 MIR1302-2-201ENST00000607096 138 ntBASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
TRIM49D1C9J1S8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 Y_RNA.326-201ENST00000365176 113 ntBASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 RNU6-1175P-201ENST00000365200 107 ntBASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 SNORA33.2-201ENST00000365413 134 ntBASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 Y_RNA.446-201ENST00000384178 104 ntBASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 AL078595.1-201ENST00000404458 226 ntBASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 AL590004.1-201ENST00000405321 300 ntBASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 RPL23AP36-201ENST00000413895 458 ntBASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 SDAD1P3-201ENST00000427380 333 ntBASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 FCF1P4-201ENST00000448326 183 ntBASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 AL163195.1-201ENST00000496941 348 ntBASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 SNORA31.10-201ENST00000516482 106 ntBASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 SNORA40.14-201ENST00000516543 86 ntBASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 Y_RNA.715-201ENST00000517082 110 ntBASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 RNU6-897P-201ENST00000517135 105 ntBASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 AL161670.1-201ENST00000554348 137 ntBASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 AC005786.1-201ENST00000588553 154 ntBASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 DEFB117-201ENST00000602356 141 ntBASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 AC073413.2-201ENST00000604332 360 ntBASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.24□□□□□ -2.21
TRIM49D1C9J1S8 Y_RNA.210-201ENST00000364161 110 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 Y_RNA.222-201ENST00000364264 102 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 RNU6-1240P-201ENST00000365155 104 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 SNORD14.1-201ENST00000365609 90 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 Y_RNA.389-201ENST00000383924 113 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 RNU6-1227P-201ENST00000383981 107 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 Y_RNA.570-201ENST00000384750 101 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 EBAG9P1-201ENST00000418955 543 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 TOMM22P2-201ENST00000430735 237 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 AC073910.1-201ENST00000445047 438 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 MRPS10P1-201ENST00000448483 130 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 AC114982.1-201ENST00000469402 321 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 RPS27P22-201ENST00000478056 241 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 AC108729.3-201ENST00000513484 108 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 RNU6-155P-201ENST00000516347 100 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 RNU1-92P-201ENST00000517017 135 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 MIR4423-201ENST00000580922 80 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 MIR4438-201ENST00000585271 93 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 AC005176.2-201ENST00000596933 147 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 CYP2C61P-201ENST00000604072 290 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 AC010900.2-201ENST00000604508 210 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 AL353149.1-201ENST00000610667 244 ntBASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TRIM49D1C9J1S8 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 Y_RNA.16-201ENST00000362421 102 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 SNORA27.1-201ENST00000362604 124 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 Y_RNA.64-201ENST00000362845 102 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 RNU1-22P-201ENST00000363334 158 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 Y_RNA.329-201ENST00000365209 107 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 MIR150-201ENST00000385048 84 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms