Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RNU1-142P-201ENST00000516682 145 ntBASIC2□□□□□ -2.09
TCRBV7S3A2A0A539 RNU7-172P-201ENST00000517125 64 ntBASIC2□□□□□ -2.09
TCRBV7S3A2A0A539 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2□□□□□ -2.09
TCRBV7S3A2A0A539 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
TCRBV7S3A2A0A539 5S_rRNA.11-201ENST00000618635 84 ntBASIC2□□□□□ -2.09
TCRBV7S3A2A0A539 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
TCRBV7S3A2A0A539 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
TCRBV7S3A2A0A539 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.99□□□□□ -2.09
TCRBV7S3A2A0A539 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
TCRBV7S3A2A0A539 AL356292.1-201ENST00000283110 373 ntBASIC1.99□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.20-201ENST00000362479 113 ntBASIC1.99□□□□□ -2.09
TCRBV7S3A2A0A539 RNU6-525P-201ENST00000363685 104 ntBASIC1.99□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.172-201ENST00000363765 102 ntBASIC1.99□□□□□ -2.09
TCRBV7S3A2A0A539 RNU6-801P-201ENST00000364087 105 ntBASIC1.99□□□□□ -2.09
TCRBV7S3A2A0A539 AL603910.2-201ENST00000407268 136 ntBASIC1.99□□□□□ -2.09
TCRBV7S3A2A0A539 SNORA3.2-201ENST00000408221 125 ntBASIC1.99□□□□□ -2.09
TCRBV7S3A2A0A539 RNU6-855P-201ENST00000410395 104 ntBASIC1.99□□□□□ -2.09
TCRBV7S3A2A0A539 AC011753.1-201ENST00000451001 220 ntBASIC1.99□□□□□ -2.09
TCRBV7S3A2A0A539 RPS20P10-201ENST00000451209 253 ntBASIC1.99□□□□□ -2.09
TCRBV7S3A2A0A539 RNU6-1278P-201ENST00000516130 107 ntBASIC1.99□□□□□ -2.09
TCRBV7S3A2A0A539 RNU6-1023P-201ENST00000516137 106 ntBASIC1.99□□□□□ -2.09
TCRBV7S3A2A0A539 MIR1273D-201ENST00000577266 86 ntBASIC1.99□□□□□ -2.09
TCRBV7S3A2A0A539 AC078899.2-201ENST00000595282 212 ntBASIC1.99□□□□□ -2.09
TCRBV7S3A2A0A539 U1.36-201ENST00000620684 176 ntBASIC1.99□□□□□ -2.09
TCRBV7S3A2A0A539 AC012640.5-201ENST00000623897 319 ntBASIC1.99□□□□□ -2.09
TCRBV7S3A2A0A539 SNORA33-201ENST00000363664 130 ntBASIC1.98□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.188-201ENST00000363952 111 ntBASIC1.98□□□□□ -2.09
TCRBV7S3A2A0A539 RNU6-1019P-201ENST00000364424 107 ntBASIC1.98□□□□□ -2.09
TCRBV7S3A2A0A539 RNU11-5P-201ENST00000391216 129 ntBASIC1.98□□□□□ -2.09
TCRBV7S3A2A0A539 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.98□□□□□ -2.09
TCRBV7S3A2A0A539 RN7SKP223-201ENST00000410582 62 ntBASIC1.98□□□□□ -2.09
TCRBV7S3A2A0A539 RNA5SP501-201ENST00000410990 112 ntBASIC1.98□□□□□ -2.09
TCRBV7S3A2A0A539 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.98□□□□□ -2.09
TCRBV7S3A2A0A539 AL356320.1-201ENST00000429616 163 ntBASIC1.98□□□□□ -2.09
TCRBV7S3A2A0A539 AL162725.1-201ENST00000435405 301 ntBASIC1.98□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.680-201ENST00000516441 93 ntBASIC1.98□□□□□ -2.09
TCRBV7S3A2A0A539 SUB1P4-201ENST00000566062 339 ntBASIC1.98□□□□□ -2.09
TCRBV7S3A2A0A539 MIR3128-201ENST00000581957 66 ntBASIC1.98□□□□□ -2.09
TCRBV7S3A2A0A539 MIR4448-201ENST00000584360 86 ntBASIC1.98□□□□□ -2.09
TCRBV7S3A2A0A539 AC006006.1-201ENST00000603082 144 ntBASIC1.98□□□□□ -2.09
TCRBV7S3A2A0A539 AC069114.2-201ENST00000604699 304 ntBASIC1.98□□□□□ -2.09
TCRBV7S3A2A0A539 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
TCRBV7S3A2A0A539 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.82-201ENST00000363000 102 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.92-201ENST00000363043 102 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.235-201ENST00000364412 102 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 RNU6-740P-201ENST00000364734 105 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.306-201ENST00000365015 102 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.312-201ENST00000365089 102 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.322-201ENST00000365151 102 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 SNORD116-13-201ENST00000384408 92 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 RNU6-1186P-201ENST00000410429 97 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.650-201ENST00000459002 102 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 AC010409.1-201ENST00000487382 476 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 RNVU1-2-201ENST00000516326 135 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 RNA5SP364-201ENST00000516938 78 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.777-201ENST00000516982 102 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 AC015720.1-201ENST00000565251 277 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.771-201ENST00000598668 102 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 AC010900.2-201ENST00000604508 210 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 BX284668.6-201ENST00000606899 438 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 AC004832.4-201ENST00000608952 331 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 MIR6852-201ENST00000621699 66 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 Y_RNA.789-201ENST00000622480 102 ntBASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
TCRBV7S3A2A0A539 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 RNU6-1272P-201ENST00000362776 107 ntBASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 RNU6-1323P-201ENST00000384025 107 ntBASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 SNORA72.4-201ENST00000384174 132 ntBASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 RNU4-52P-201ENST00000384209 138 ntBASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 RNU6-662P-201ENST00000384253 104 ntBASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 SUMO2P12-201ENST00000405924 140 ntBASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 RNA5SP511-201ENST00000410487 115 ntBASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 RNA5SP489-201ENST00000410986 109 ntBASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 HMGN2P38-201ENST00000423806 265 ntBASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 AC245047.4-201ENST00000433189 144 ntBASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 Y_RNA.637-201ENST00000459424 114 ntBASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 AL163195.1-201ENST00000496941 348 ntBASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 RNU6-63P-201ENST00000516690 95 ntBASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 AC084364.2-201ENST00000546924 395 ntBASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 MIR5094-201ENST00000578766 85 ntBASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 MIR4282-201ENST00000583613 67 ntBASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 AC091178.2-201ENST00000584401 117 ntBASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 AL162424.1-201ENST00000602325 221 ntBASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 AC005972.2-201ENST00000604690 348 ntBASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 MIR219B-201ENST00000637023 88 ntBASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
TCRBV7S3A2A0A539 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
TCRBV7S3A2A0A539 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TCRBV7S3A2A0A539 Y_RNA.489-201ENST00000384410 101 ntBASIC1.95□□□□□ -2.1
TCRBV7S3A2A0A539 RNU6-1289P-201ENST00000384431 106 ntBASIC1.95□□□□□ -2.1
TCRBV7S3A2A0A539 SNORA8-201ENST00000384574 139 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms