Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RNU6-966P-201ENST00000516479 104 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 CYCSP23-201ENST00000519781 313 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 MIR3937-201ENST00000580135 106 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 MIR5690-201ENST00000583739 73 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 SNORD114-21-201ENST00000606412 72 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 AC040896.1-201ENST00000613819 479 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 AL078604.3-201ENST00000615580 211 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 AC138305.3-201ENST00000624988 240 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 MIR6079-201ENST00000635807 62 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 MIR6767-201ENST00000637302 66 ntBASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SMIM28A0A1B0GU29 RNA5SP259-201ENST00000365541 109 ntBASIC1.13□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-708P-201ENST00000384217 107 ntBASIC1.13□□□□□ -2.23
SMIM28A0A1B0GU29 MTCYBP4-201ENST00000401524 249 ntBASIC1.13□□□□□ -2.23
SMIM28A0A1B0GU29 SDAD1P3-201ENST00000427380 333 ntBASIC1.13□□□□□ -2.23
SMIM28A0A1B0GU29 PGBD4P5-201ENST00000445958 426 ntBASIC1.13□□□□□ -2.23
SMIM28A0A1B0GU29 ELOCP24-201ENST00000456370 334 ntBASIC1.13□□□□□ -2.23
SMIM28A0A1B0GU29 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.13□□□□□ -2.23
SMIM28A0A1B0GU29 RNA5SP20-201ENST00000515976 84 ntBASIC1.13□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-507P-201ENST00000516045 100 ntBASIC1.13□□□□□ -2.23
SMIM28A0A1B0GU29 SUMO2P16-201ENST00000519475 264 ntBASIC1.13□□□□□ -2.23
SMIM28A0A1B0GU29 AC023442.1-201ENST00000531247 422 ntBASIC1.13□□□□□ -2.23
SMIM28A0A1B0GU29 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.13□□□□□ -2.23
SMIM28A0A1B0GU29 AC093027.1-201ENST00000546698 429 ntBASIC1.13□□□□□ -2.23
SMIM28A0A1B0GU29 AL021879.1-201ENST00000611756 288 ntBASIC1.13□□□□□ -2.23
SMIM28A0A1B0GU29 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
SMIM28A0A1B0GU29 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 Y_RNA.191-201ENST00000363972 113 ntBASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 SNORD115-30-201ENST00000364117 82 ntBASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 Y_RNA.259-201ENST00000364619 101 ntBASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-117P-201ENST00000365415 107 ntBASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 Y_RNA.361-201ENST00000365515 120 ntBASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-505P-201ENST00000384427 107 ntBASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 RN7SKP200-201ENST00000410564 320 ntBASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 AC096644.2-201ENST00000429278 159 ntBASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 AL137792.2-201ENST00000443484 235 ntBASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 AC092991.1-201ENST00000477176 376 ntBASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-408P-201ENST00000515910 100 ntBASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 Y_RNA.718-201ENST00000517110 102 ntBASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 RNU2-12P-201ENST00000517216 168 ntBASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 AL160236.1-201ENST00000556317 195 ntBASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 AL355375.2-201ENST00000574825 175 ntBASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 MIR4452-201ENST00000583004 71 ntBASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 AC091178.2-201ENST00000584401 117 ntBASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 AL050343.2-201ENST00000607338 280 ntBASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 AC011476.5-201ENST00000615594 130 ntBASIC1.12□□□□□ -2.23
SMIM28A0A1B0GU29 MIR26B-201ENST00000362251 77 ntBASIC1.11□□□□□ -2.23
SMIM28A0A1B0GU29 Y_RNA.387-201ENST00000383918 102 ntBASIC1.11□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-1040P-201ENST00000383974 107 ntBASIC1.11□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-950P-201ENST00000384651 107 ntBASIC1.11□□□□□ -2.23
SMIM28A0A1B0GU29 MIR222-201ENST00000384992 110 ntBASIC1.11□□□□□ -2.23
SMIM28A0A1B0GU29 MIR150-201ENST00000385048 84 ntBASIC1.11□□□□□ -2.23
SMIM28A0A1B0GU29 MIR873-201ENST00000401120 77 ntBASIC1.11□□□□□ -2.23
SMIM28A0A1B0GU29 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.11□□□□□ -2.23
SMIM28A0A1B0GU29 Y_RNA.673-201ENST00000516306 88 ntBASIC1.11□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-875P-201ENST00000516488 106 ntBASIC1.11□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-1291P-201ENST00000516591 104 ntBASIC1.11□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-63P-201ENST00000516690 95 ntBASIC1.11□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-699P-201ENST00000517081 110 ntBASIC1.11□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-264P-201ENST00000517134 104 ntBASIC1.11□□□□□ -2.23
SMIM28A0A1B0GU29 MIR2355-201ENST00000517199 87 ntBASIC1.11□□□□□ -2.23
SMIM28A0A1B0GU29 AL512310.8-201ENST00000550183 120 ntBASIC1.11□□□□□ -2.23
SMIM28A0A1B0GU29 CYP3A52P-201ENST00000563326 91 ntBASIC1.11□□□□□ -2.23
SMIM28A0A1B0GU29 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.1□□□□□ -2.23
SMIM28A0A1B0GU29 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SMIM28A0A1B0GU29 SNORA1B-201ENST00000362535 133 ntBASIC1.1□□□□□ -2.23
SMIM28A0A1B0GU29 Y_RNA.101-201ENST00000363154 102 ntBASIC1.1□□□□□ -2.23
SMIM28A0A1B0GU29 Y_RNA.243-201ENST00000364481 109 ntBASIC1.1□□□□□ -2.23
SMIM28A0A1B0GU29 RNY3P4-201ENST00000384428 101 ntBASIC1.1□□□□□ -2.23
SMIM28A0A1B0GU29 Y_RNA.496-201ENST00000384444 101 ntBASIC1.1□□□□□ -2.23
SMIM28A0A1B0GU29 Y_RNA.529-201ENST00000384586 119 ntBASIC1.1□□□□□ -2.23
SMIM28A0A1B0GU29 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
SMIM28A0A1B0GU29 CALM2P4-201ENST00000430810 426 ntBASIC1.1□□□□□ -2.23
SMIM28A0A1B0GU29 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.1□□□□□ -2.23
SMIM28A0A1B0GU29 Y_RNA.632-201ENST00000459189 102 ntBASIC1.1□□□□□ -2.23
SMIM28A0A1B0GU29 RPS23P4-201ENST00000487908 423 ntBASIC1.1□□□□□ -2.23
SMIM28A0A1B0GU29 OR9P1P-201ENST00000496431 281 ntBASIC1.1□□□□□ -2.23
SMIM28A0A1B0GU29 RNU7-4P-201ENST00000516961 62 ntBASIC1.1□□□□□ -2.23
SMIM28A0A1B0GU29 MIR4778-201ENST00000577635 80 ntBASIC1.1□□□□□ -2.23
SMIM28A0A1B0GU29 MIR4801-201ENST00000582704 82 ntBASIC1.1□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-1115P-201ENST00000362490 106 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 RNU4-38P-201ENST00000364472 129 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 Y_RNA.267-201ENST00000364679 109 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 Y_RNA.314-201ENST00000365114 102 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 RNY3P14-201ENST00000384309 102 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-376P-201ENST00000384731 106 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 MIR660-201ENST00000385235 97 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 AL034345.1-201ENST00000407768 123 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 RNU5A-5P-201ENST00000411054 116 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 RNU7-152P-201ENST00000458982 64 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 RNU7-94P-201ENST00000459576 63 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 RPL30P7-201ENST00000479312 323 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 FGF7P4-201ENST00000509595 295 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 RNU6-165P-201ENST00000517170 99 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms