Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AL391834.2-201ENST00000609982 546 ntBASIC-0.35□□□□□ -2.47
TRAV4A0A0B4J268 RNU6-117P-201ENST00000365415 107 ntBASIC-0.36□□□□□ -2.47
TRAV4A0A0B4J268 RNU6-136P-201ENST00000384663 107 ntBASIC-0.36□□□□□ -2.47
TRAV4A0A0B4J268 MIR145-201ENST00000384967 88 ntBASIC-0.36□□□□□ -2.47
TRAV4A0A0B4J268 SNORA40.3-201ENST00000390964 122 ntBASIC-0.36□□□□□ -2.47
TRAV4A0A0B4J268 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.36□□□□□ -2.47
TRAV4A0A0B4J268 Z99497.1-201ENST00000421282 135 ntBASIC-0.36□□□□□ -2.47
TRAV4A0A0B4J268 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.36□□□□□ -2.47
TRAV4A0A0B4J268 MTCO2P11-201ENST00000431069 680 ntBASIC-0.36□□□□□ -2.47
TRAV4A0A0B4J268 AL606489.2-201ENST00000433886 234 ntBASIC-0.36□□□□□ -2.47
TRAV4A0A0B4J268 Z82188.1-201ENST00000436709 154 ntBASIC-0.36□□□□□ -2.47
TRAV4A0A0B4J268 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.36□□□□□ -2.47
TRAV4A0A0B4J268 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.36□□□□□ -2.47
TRAV4A0A0B4J268 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.36□□□□□ -2.47
TRAV4A0A0B4J268 RPL23AP91-201ENST00000569211 455 ntBASIC-0.36□□□□□ -2.47
TRAV4A0A0B4J268 AL357075.2-201ENST00000614906 189 ntBASIC-0.36□□□□□ -2.47
TRAV4A0A0B4J268 AL591926.4-201ENST00000616895 298 ntBASIC-0.36□□□□□ -2.47
TRAV4A0A0B4J268 AC009248.2-201ENST00000619826 254 ntBASIC-0.36□□□□□ -2.47
TRAV4A0A0B4J268 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.36□□□□□ -2.47
TRAV4A0A0B4J268 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.36□□□□□ -2.47
TRAV4A0A0B4J268 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.37□□□□□ -2.47
TRAV4A0A0B4J268 SNORD50.1-201ENST00000362987 71 ntBASIC-0.37□□□□□ -2.47
TRAV4A0A0B4J268 RNU6-214P-201ENST00000384130 107 ntBASIC-0.37□□□□□ -2.47
TRAV4A0A0B4J268 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.37□□□□□ -2.47
TRAV4A0A0B4J268 MIR938-201ENST00000401216 83 ntBASIC-0.37□□□□□ -2.47
TRAV4A0A0B4J268 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.37□□□□□ -2.47
TRAV4A0A0B4J268 AL353572.1-201ENST00000442490 417 ntBASIC-0.37□□□□□ -2.47
TRAV4A0A0B4J268 CCDC34P1-201ENST00000507441 517 ntBASIC-0.37□□□□□ -2.47
TRAV4A0A0B4J268 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.37□□□□□ -2.47
TRAV4A0A0B4J268 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.37□□□□□ -2.47
TRAV4A0A0B4J268 AP000753.3-201ENST00000604083 169 ntBASIC-0.37□□□□□ -2.47
TRAV4A0A0B4J268 AL357078.3-201ENST00000607528 618 ntBASIC-0.37□□□□□ -2.47
TRAV4A0A0B4J268 AL158063.1-201ENST00000615349 536 ntBASIC-0.37□□□□□ -2.47
TRAV4A0A0B4J268 AL109933.3-201ENST00000619095 188 ntBASIC-0.37□□□□□ -2.47
TRAV4A0A0B4J268 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.37□□□□□ -2.47
TRAV4A0A0B4J268 RNU6-1120P-201ENST00000362988 108 ntBASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 MIR214-201ENST00000385214 110 ntBASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 RNU2-54P-201ENST00000410299 190 ntBASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 BX295541.1-201ENST00000417774 250 ntBASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 MTCYBP8-201ENST00000422855 651 ntBASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 AC015818.7-201ENST00000428754 109 ntBASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 AC087499.7-201ENST00000441958 109 ntBASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 UBE2V1P12-201ENST00000503954 474 ntBASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 RN7SKP287-201ENST00000516546 266 ntBASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 SNORD45.4-201ENST00000516629 73 ntBASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 UBL5P4-201ENST00000562584 236 ntBASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 AC090897.1-201ENST00000580909 226 ntBASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 MIR4743-201ENST00000584576 69 ntBASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 AC011458.1-201ENST00000604034 617 ntBASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 AC103705.1-201ENST00000619013 241 ntBASIC-0.38□□□□□ -2.47
TRAV4A0A0B4J268 RNU6-82P-201ENST00000363970 107 ntBASIC-0.39□□□□□ -2.47
TRAV4A0A0B4J268 RNY3P9-201ENST00000384727 106 ntBASIC-0.39□□□□□ -2.47
TRAV4A0A0B4J268 MIR593-201ENST00000384856 100 ntBASIC-0.39□□□□□ -2.47
TRAV4A0A0B4J268 PCNPP3-201ENST00000393579 471 ntBASIC-0.39□□□□□ -2.47
TRAV4A0A0B4J268 AL606923.1-201ENST00000406616 190 ntBASIC-0.39□□□□□ -2.47
TRAV4A0A0B4J268 RPL30P16-201ENST00000419341 429 ntBASIC-0.39□□□□□ -2.47
TRAV4A0A0B4J268 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.39□□□□□ -2.47
TRAV4A0A0B4J268 HMGN2P32-201ENST00000444648 269 ntBASIC-0.39□□□□□ -2.47
TRAV4A0A0B4J268 AC079354.2-201ENST00000453523 154 ntBASIC-0.39□□□□□ -2.47
TRAV4A0A0B4J268 TPTE2P5-203ENST00000458118 728 ntBASIC-0.39□□□□□ -2.47
TRAV4A0A0B4J268 RPL17P19-201ENST00000489069 552 ntBASIC-0.39□□□□□ -2.47
TRAV4A0A0B4J268 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.39□□□□□ -2.47
TRAV4A0A0B4J268 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-0.39□□□□□ -2.47
TRAV4A0A0B4J268 MIR548AR-201ENST00000582191 57 ntBASIC-0.39□□□□□ -2.47
TRAV4A0A0B4J268 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.39□□□□□ -2.47
TRAV4A0A0B4J268 RNA5SP325-201ENST00000363756 130 ntBASIC-0.4□□□□□ -2.47
TRAV4A0A0B4J268 SNORD45.3-201ENST00000363836 72 ntBASIC-0.4□□□□□ -2.47
TRAV4A0A0B4J268 RNA5SP117-201ENST00000365294 118 ntBASIC-0.4□□□□□ -2.47
TRAV4A0A0B4J268 MIR873-201ENST00000401120 77 ntBASIC-0.4□□□□□ -2.47
TRAV4A0A0B4J268 AC073464.1-201ENST00000429823 534 ntBASIC-0.4□□□□□ -2.47
TRAV4A0A0B4J268 AC104692.1-201ENST00000472406 90 ntBASIC-0.4□□□□□ -2.47
TRAV4A0A0B4J268 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.4□□□□□ -2.47
TRAV4A0A0B4J268 SNORA18.6-201ENST00000516792 115 ntBASIC-0.4□□□□□ -2.47
TRAV4A0A0B4J268 AC020891.4-201ENST00000605745 93 ntBASIC-0.4□□□□□ -2.47
TRAV4A0A0B4J268 AL133215.3-201ENST00000609801 448 ntBASIC-0.4□□□□□ -2.47
TRAV4A0A0B4J268 RNA5SP457-201ENST00000363657 124 ntBASIC-0.41□□□□□ -2.48
TRAV4A0A0B4J268 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.41□□□□□ -2.48
TRAV4A0A0B4J268 RNU6-996P-201ENST00000365438 107 ntBASIC-0.41□□□□□ -2.48
TRAV4A0A0B4J268 MIR643-201ENST00000385267 97 ntBASIC-0.41□□□□□ -2.48
TRAV4A0A0B4J268 RNU6-205P-201ENST00000390858 107 ntBASIC-0.41□□□□□ -2.48
TRAV4A0A0B4J268 MTCO2P33-201ENST00000402100 465 ntBASIC-0.41□□□□□ -2.48
TRAV4A0A0B4J268 AC092447.3-201ENST00000426027 686 ntBASIC-0.41□□□□□ -2.48
TRAV4A0A0B4J268 MTCO2P16-201ENST00000436962 677 ntBASIC-0.41□□□□□ -2.48
TRAV4A0A0B4J268 RNU7-63P-201ENST00000459054 62 ntBASIC-0.41□□□□□ -2.48
TRAV4A0A0B4J268 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.41□□□□□ -2.48
TRAV4A0A0B4J268 MIR5692C1-201ENST00000585309 91 ntBASIC-0.41□□□□□ -2.48
TRAV4A0A0B4J268 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.41□□□□□ -2.48
TRAV4A0A0B4J268 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.42□□□□□ -2.48
TRAV4A0A0B4J268 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.42□□□□□ -2.48
TRAV4A0A0B4J268 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.42□□□□□ -2.48
TRAV4A0A0B4J268 RNU6-127P-201ENST00000390897 107 ntBASIC-0.42□□□□□ -2.48
TRAV4A0A0B4J268 MIR892B-201ENST00000401279 77 ntBASIC-0.42□□□□□ -2.48
TRAV4A0A0B4J268 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms