Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC016909.1-201ENST00000415916 166 ntBASIC2.04□□□□□ -2.08
SNX9Q9Y5X1 AL390729.2-201ENST00000416137 156 ntBASIC2.04□□□□□ -2.08
SNX9Q9Y5X1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.04□□□□□ -2.08
SNX9Q9Y5X1 RPL23AP3-201ENST00000453844 468 ntBASIC2.04□□□□□ -2.08
SNX9Q9Y5X1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.04□□□□□ -2.08
SNX9Q9Y5X1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.04□□□□□ -2.08
SNX9Q9Y5X1 MRPS17P9-201ENST00000511924 393 ntBASIC2.04□□□□□ -2.08
SNX9Q9Y5X1 AC025647.1-201ENST00000517879 253 ntBASIC2.04□□□□□ -2.08
SNX9Q9Y5X1 AC023157.2-201ENST00000540596 141 ntBASIC2.04□□□□□ -2.08
SNX9Q9Y5X1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SNX9Q9Y5X1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.04□□□□□ -2.08
SNX9Q9Y5X1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.04□□□□□ -2.08
SNX9Q9Y5X1 MIR3935-201ENST00000583472 104 ntBASIC2.04□□□□□ -2.08
SNX9Q9Y5X1 AC010615.1-201ENST00000594254 1764 ntBASIC2.04□□□□□ -2.08
SNX9Q9Y5X1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.04□□□□□ -2.08
SNX9Q9Y5X1 U6.115-201ENST00000636045 103 ntBASIC2.04□□□□□ -2.08
SNX9Q9Y5X1 SNORD115-30-201ENST00000364117 82 ntBASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 RNU6-1164P-201ENST00000364428 107 ntBASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 Y_RNA.461-201ENST00000384263 103 ntBASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 RNU6-1235P-201ENST00000384559 107 ntBASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 RNU6-713P-201ENST00000384761 107 ntBASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 MIR583-201ENST00000384846 75 ntBASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 MIR518A2-201ENST00000384966 87 ntBASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 MIR504-201ENST00000385065 83 ntBASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 MIR1302-3-201ENST00000408128 138 ntBASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 MIR1302-6-201ENST00000408466 90 ntBASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 RNA5SP450-201ENST00000411206 102 ntBASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 AC139712.2-201ENST00000424302 339 ntBASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 AC003989.2-201ENST00000440224 169 ntBASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 AL357134.1-201ENST00000445848 426 ntBASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 SNORD127-201ENST00000458892 86 ntBASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 RNU6-498P-201ENST00000459468 107 ntBASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 TRBVB-201ENST00000477100 408 ntBASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 RNU6-436P-201ENST00000516171 114 ntBASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 RNU7-110P-201ENST00000516891 62 ntBASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 AC004817.2-201ENST00000561794 651 ntBASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SNX9Q9Y5X1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SNX9Q9Y5X1 Y_RNA.99-201ENST00000363138 105 ntBASIC2.02□□□□□ -2.09
SNX9Q9Y5X1 Y_RNA.331-201ENST00000365267 102 ntBASIC2.02□□□□□ -2.09
SNX9Q9Y5X1 SNORA40.18-201ENST00000391200 128 ntBASIC2.02□□□□□ -2.09
SNX9Q9Y5X1 AL355796.1-201ENST00000406706 323 ntBASIC2.02□□□□□ -2.09
SNX9Q9Y5X1 RPL23AP36-201ENST00000413895 458 ntBASIC2.02□□□□□ -2.09
SNX9Q9Y5X1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.02□□□□□ -2.09
SNX9Q9Y5X1 AC005042.3-201ENST00000453230 174 ntBASIC2.02□□□□□ -2.09
SNX9Q9Y5X1 AC114982.1-201ENST00000469402 321 ntBASIC2.02□□□□□ -2.09
SNX9Q9Y5X1 MTND1P19-201ENST00000511780 315 ntBASIC2.02□□□□□ -2.09
SNX9Q9Y5X1 RNA5SP182-201ENST00000516064 82 ntBASIC2.02□□□□□ -2.09
SNX9Q9Y5X1 RNU2-34P-201ENST00000516534 121 ntBASIC2.02□□□□□ -2.09
SNX9Q9Y5X1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.02□□□□□ -2.09
SNX9Q9Y5X1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.02□□□□□ -2.09
SNX9Q9Y5X1 MIR7843-201ENST00000622274 79 ntBASIC2.02□□□□□ -2.09
SNX9Q9Y5X1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.02□□□□□ -2.09
SNX9Q9Y5X1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SNX9Q9Y5X1 RNU4-90P-201ENST00000362773 141 ntBASIC2.01□□□□□ -2.09
SNX9Q9Y5X1 RNU6-702P-201ENST00000364982 107 ntBASIC2.01□□□□□ -2.09
SNX9Q9Y5X1 SNORA72.2-201ENST00000365028 127 ntBASIC2.01□□□□□ -2.09
SNX9Q9Y5X1 Y_RNA.418-201ENST00000384029 102 ntBASIC2.01□□□□□ -2.09
SNX9Q9Y5X1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SNX9Q9Y5X1 RNU6-57P-201ENST00000411348 103 ntBASIC2.01□□□□□ -2.09
SNX9Q9Y5X1 AL158823.1-201ENST00000418441 478 ntBASIC2.01□□□□□ -2.09
SNX9Q9Y5X1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.01□□□□□ -2.09
SNX9Q9Y5X1 AC060773.1-201ENST00000421698 310 ntBASIC2.01□□□□□ -2.09
SNX9Q9Y5X1 AC096920.1-201ENST00000423991 241 ntBASIC2.01□□□□□ -2.09
SNX9Q9Y5X1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.01□□□□□ -2.09
SNX9Q9Y5X1 SNORD65B-201ENST00000459126 73 ntBASIC2.01□□□□□ -2.09
SNX9Q9Y5X1 RNU6-1338P-201ENST00000516328 91 ntBASIC2.01□□□□□ -2.09
SNX9Q9Y5X1 RNU6-295P-201ENST00000516901 104 ntBASIC2.01□□□□□ -2.09
SNX9Q9Y5X1 RNU6-856P-201ENST00000516959 98 ntBASIC2.01□□□□□ -2.09
SNX9Q9Y5X1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.01□□□□□ -2.09
SNX9Q9Y5X1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2□□□□□ -2.09
SNX9Q9Y5X1 MIR335-201ENST00000362173 94 ntBASIC2□□□□□ -2.09
SNX9Q9Y5X1 Y_RNA.237-201ENST00000364439 102 ntBASIC2□□□□□ -2.09
SNX9Q9Y5X1 RNU6-290P-201ENST00000365212 101 ntBASIC2□□□□□ -2.09
SNX9Q9Y5X1 Y_RNA.383-201ENST00000383855 97 ntBASIC2□□□□□ -2.09
SNX9Q9Y5X1 Y_RNA.562-201ENST00000384695 113 ntBASIC2□□□□□ -2.09
SNX9Q9Y5X1 MIR29C-201ENST00000385231 88 ntBASIC2□□□□□ -2.09
SNX9Q9Y5X1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2□□□□□ -2.09
SNX9Q9Y5X1 RNU1-131P-201ENST00000458943 161 ntBASIC2□□□□□ -2.09
SNX9Q9Y5X1 RPL23AP42-201ENST00000471152 471 ntBASIC2□□□□□ -2.09
SNX9Q9Y5X1 RNU6-155P-201ENST00000516347 100 ntBASIC2□□□□□ -2.09
SNX9Q9Y5X1 MIR4299-201ENST00000577899 72 ntBASIC2□□□□□ -2.09
SNX9Q9Y5X1 AC012433.1-201ENST00000588916 398 ntBASIC2□□□□□ -2.09
SNX9Q9Y5X1 AP000942.4-201ENST00000604811 241 ntBASIC2□□□□□ -2.09
SNX9Q9Y5X1 AC062037.2-201ENST00000610137 73 ntBASIC2□□□□□ -2.09
SNX9Q9Y5X1 MIR6845-201ENST00000613182 61 ntBASIC2□□□□□ -2.09
SNX9Q9Y5X1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2□□□□□ -2.09
SNX9Q9Y5X1 RNA5SP432-201ENST00000362480 116 ntBASIC1.99□□□□□ -2.09
SNX9Q9Y5X1 RNA5SP276-201ENST00000362580 94 ntBASIC1.99□□□□□ -2.09
SNX9Q9Y5X1 Y_RNA.136-201ENST00000363444 102 ntBASIC1.99□□□□□ -2.09
SNX9Q9Y5X1 SNORA20B-201ENST00000384220 132 ntBASIC1.99□□□□□ -2.09
SNX9Q9Y5X1 RNU6-21P-201ENST00000384710 107 ntBASIC1.99□□□□□ -2.09
SNX9Q9Y5X1 RNU2-38P-201ENST00000410856 79 ntBASIC1.99□□□□□ -2.09
SNX9Q9Y5X1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.99□□□□□ -2.09
SNX9Q9Y5X1 MTND2P29-201ENST00000438595 412 ntBASIC1.99□□□□□ -2.09
SNX9Q9Y5X1 AC245102.2-201ENST00000448956 180 ntBASIC1.99□□□□□ -2.09
SNX9Q9Y5X1 RNU6-1132P-201ENST00000459214 107 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms