Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC105758.1-201ENST00000506038 399 ntBASIC1.49□□□□□ -2.17
PCDHGA1Q9Y5H4 SNORA40.9-201ENST00000515895 93 ntBASIC1.49□□□□□ -2.17
PCDHGA1Q9Y5H4 RNU6-507P-201ENST00000516045 100 ntBASIC1.49□□□□□ -2.17
PCDHGA1Q9Y5H4 RNU1-92P-201ENST00000517017 135 ntBASIC1.49□□□□□ -2.17
PCDHGA1Q9Y5H4 SNORA4-201ENST00000584302 138 ntBASIC1.49□□□□□ -2.17
PCDHGA1Q9Y5H4 AL161722.3-201ENST00000605789 2983 ntBASIC1.49□□□□□ -2.17
PCDHGA1Q9Y5H4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.49□□□□□ -2.17
PCDHGA1Q9Y5H4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
PCDHGA1Q9Y5H4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 SNORA20B-201ENST00000384220 132 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 RNA5SP109-201ENST00000391010 116 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 RPL21P1-201ENST00000399532 476 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 AL355796.1-201ENST00000406706 323 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 RNA5SP475-201ENST00000410568 110 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 AL161935.2-201ENST00000414627 60 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 MTCO2P27-201ENST00000420740 428 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 RAB28P5-201ENST00000427490 651 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 AC005002.2-201ENST00000438228 269 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 AL606517.2-201ENST00000442855 241 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 RNU7-152P-201ENST00000458982 64 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 Y_RNA.632-201ENST00000459189 102 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 RNU6-625P-201ENST00000459412 107 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 AC010469.2-201ENST00000496412 480 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 RAB11AP2-201ENST00000545905 639 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 AC015720.1-201ENST00000565251 277 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 AC022217.4-201ENST00000604389 163 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 AP001485.1-201ENST00000604799 199 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 AL157834.3-201ENST00000615543 103 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 AC084781.2-201ENST00000615568 161 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 AC095038.3-201ENST00000634439 195 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 MIR3674-201ENST00000636576 68 ntBASIC1.48□□□□□ -2.17
PCDHGA1Q9Y5H4 MIR302D-201ENST00000362275 68 ntBASIC1.47□□□□□ -2.17
PCDHGA1Q9Y5H4 Y_RNA.187-201ENST00000363918 113 ntBASIC1.47□□□□□ -2.17
PCDHGA1Q9Y5H4 RNU6-1040P-201ENST00000383974 107 ntBASIC1.47□□□□□ -2.17
PCDHGA1Q9Y5H4 MIR194-1-201ENST00000384892 85 ntBASIC1.47□□□□□ -2.17
PCDHGA1Q9Y5H4 RN7SKP51-201ENST00000410781 304 ntBASIC1.47□□□□□ -2.17
PCDHGA1Q9Y5H4 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.47□□□□□ -2.17
PCDHGA1Q9Y5H4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.47□□□□□ -2.17
PCDHGA1Q9Y5H4 AC099799.1-201ENST00000439809 192 ntBASIC1.47□□□□□ -2.17
PCDHGA1Q9Y5H4 AC027119.1-201ENST00000440877 241 ntBASIC1.47□□□□□ -2.17
PCDHGA1Q9Y5H4 MRPS10P1-201ENST00000448483 130 ntBASIC1.47□□□□□ -2.17
PCDHGA1Q9Y5H4 HMGN1P7-201ENST00000491722 313 ntBASIC1.47□□□□□ -2.17
PCDHGA1Q9Y5H4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.47□□□□□ -2.17
PCDHGA1Q9Y5H4 AP002001.1-203ENST00000534002 267 ntBASIC1.47□□□□□ -2.17
PCDHGA1Q9Y5H4 AP001094.1-201ENST00000579805 193 ntBASIC1.47□□□□□ -2.17
PCDHGA1Q9Y5H4 MIR4438-201ENST00000585271 93 ntBASIC1.47□□□□□ -2.17
PCDHGA1Q9Y5H4 MTND5P10-201ENST00000603719 1809 ntBASIC1.47□□□□□ -2.17
PCDHGA1Q9Y5H4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.47□□□□□ -2.17
PCDHGA1Q9Y5H4 RNU6-454P-201ENST00000364292 107 ntBASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 Y_RNA.356-201ENST00000365475 113 ntBASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 RNU6-203P-201ENST00000384038 104 ntBASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 SNORD26-201ENST00000384147 75 ntBASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 RNU6-1310P-201ENST00000384153 107 ntBASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 Y_RNA.605-201ENST00000410577 105 ntBASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 RNU7-94P-201ENST00000459576 63 ntBASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 SNORD19B-201ENST00000459623 84 ntBASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 RPS27P22-201ENST00000478056 241 ntBASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 RNU6-699P-201ENST00000517081 110 ntBASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 AC027419.1-201ENST00000522976 328 ntBASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 AC023157.2-201ENST00000540596 141 ntBASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 AL442163.3-201ENST00000554110 156 ntBASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 AC015688.6-201ENST00000577737 104 ntBASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 MIR3937-201ENST00000580135 106 ntBASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 PRR13P7-201ENST00000605538 430 ntBASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 AL353770.2-201ENST00000620024 78 ntBASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 AC138305.3-201ENST00000624988 240 ntBASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 U6.115-201ENST00000636045 103 ntBASIC1.46□□□□□ -2.18
PCDHGA1Q9Y5H4 RNU6-1123P-201ENST00000362347 106 ntBASIC1.45□□□□□ -2.18
PCDHGA1Q9Y5H4 RNY3P11-201ENST00000364153 102 ntBASIC1.45□□□□□ -2.18
PCDHGA1Q9Y5H4 Y_RNA.314-201ENST00000365114 102 ntBASIC1.45□□□□□ -2.18
PCDHGA1Q9Y5H4 RNY1P14-201ENST00000384426 108 ntBASIC1.45□□□□□ -2.18
PCDHGA1Q9Y5H4 RNY3P4-201ENST00000384428 101 ntBASIC1.45□□□□□ -2.18
PCDHGA1Q9Y5H4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.45□□□□□ -2.18
PCDHGA1Q9Y5H4 RPL30P13-201ENST00000418873 348 ntBASIC1.45□□□□□ -2.18
PCDHGA1Q9Y5H4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.45□□□□□ -2.18
PCDHGA1Q9Y5H4 RNU7-169P-201ENST00000459456 61 ntBASIC1.45□□□□□ -2.18
PCDHGA1Q9Y5H4 AC099513.1-201ENST00000490423 301 ntBASIC1.45□□□□□ -2.18
PCDHGA1Q9Y5H4 RNU6-408P-201ENST00000515910 100 ntBASIC1.45□□□□□ -2.18
PCDHGA1Q9Y5H4 RNU6-911P-201ENST00000516523 104 ntBASIC1.45□□□□□ -2.18
PCDHGA1Q9Y5H4 MIR4452-201ENST00000583004 71 ntBASIC1.45□□□□□ -2.18
PCDHGA1Q9Y5H4 AC005828.6-201ENST00000606610 232 ntBASIC1.45□□□□□ -2.18
PCDHGA1Q9Y5H4 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.45□□□□□ -2.18
PCDHGA1Q9Y5H4 RNU4-13P-201ENST00000364019 141 ntBASIC1.44□□□□□ -2.18
PCDHGA1Q9Y5H4 Y_RNA.463-201ENST00000384271 102 ntBASIC1.44□□□□□ -2.18
PCDHGA1Q9Y5H4 MIR1323-201ENST00000408090 73 ntBASIC1.44□□□□□ -2.18
PCDHGA1Q9Y5H4 RN7SKP200-201ENST00000410564 320 ntBASIC1.44□□□□□ -2.18
PCDHGA1Q9Y5H4 MTCO3P19-201ENST00000415864 321 ntBASIC1.44□□□□□ -2.18
PCDHGA1Q9Y5H4 SNX2P2-201ENST00000424553 323 ntBASIC1.44□□□□□ -2.18
PCDHGA1Q9Y5H4 AC236972.2-201ENST00000434979 310 ntBASIC1.44□□□□□ -2.18
PCDHGA1Q9Y5H4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.44□□□□□ -2.18
PCDHGA1Q9Y5H4 SNORA31.10-201ENST00000516482 106 ntBASIC1.44□□□□□ -2.18
PCDHGA1Q9Y5H4 RNA5SP102-201ENST00000516865 106 ntBASIC1.44□□□□□ -2.18
PCDHGA1Q9Y5H4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.44□□□□□ -2.18
PCDHGA1Q9Y5H4 AC093027.1-201ENST00000546698 429 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms