Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MIR29C-201ENST00000385231 88 ntBASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 AL355796.1-201ENST00000406706 323 ntBASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 MIR1253-201ENST00000408273 105 ntBASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 MIR1262-201ENST00000408276 93 ntBASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 AL135790.2-201ENST00000437701 267 ntBASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 AC104332.1-201ENST00000440471 797 ntBASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 SNORD2.1-201ENST00000458762 69 ntBASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 SUMO2P18-201ENST00000518873 252 ntBASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 MIR4524B-201ENST00000581569 115 ntBASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 MIR4769-201ENST00000584126 77 ntBASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 snoU18.1-201ENST00000629629 71 ntBASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 AC068700.1-201ENST00000565862 3754 ntBASIC2.53□□□□□ -2
PCDHB1Q9Y5F3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
PCDHB1Q9Y5F3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.53□□□□□ -2
PCDHB1Q9Y5F3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.53□□□□□ -2
PCDHB1Q9Y5F3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PCDHB1Q9Y5F3 MIR340-201ENST00000362125 95 ntBASIC2.53□□□□□ -2
PCDHB1Q9Y5F3 SNORA27.1-201ENST00000362604 124 ntBASIC2.53□□□□□ -2
PCDHB1Q9Y5F3 RNU6-1020P-201ENST00000363684 107 ntBASIC2.53□□□□□ -2
PCDHB1Q9Y5F3 RNU1-148P-201ENST00000384472 162 ntBASIC2.53□□□□□ -2
PCDHB1Q9Y5F3 SNORA40.19-201ENST00000390846 128 ntBASIC2.53□□□□□ -2
PCDHB1Q9Y5F3 RNU6-918P-201ENST00000391219 106 ntBASIC2.53□□□□□ -2
PCDHB1Q9Y5F3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.53□□□□□ -2
PCDHB1Q9Y5F3 AL137100.2-201ENST00000555786 315 ntBASIC2.53□□□□□ -2
PCDHB1Q9Y5F3 MIR4308-201ENST00000580634 81 ntBASIC2.53□□□□□ -2
PCDHB1Q9Y5F3 MIR5194-201ENST00000582634 120 ntBASIC2.53□□□□□ -2
PCDHB1Q9Y5F3 AL008718.3-201ENST00000610217 321 ntBASIC2.53□□□□□ -2
PCDHB1Q9Y5F3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.53□□□□□ -2
PCDHB1Q9Y5F3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.53□□□□□ -2
PCDHB1Q9Y5F3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2.01
PCDHB1Q9Y5F3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.53□□□□□ -2.01
PCDHB1Q9Y5F3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 SNORD114-30-201ENST00000364448 72 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 RNU6-211P-201ENST00000384047 107 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 RPS12P2-201ENST00000439728 269 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 RPL23AP7-203ENST00000449021 469 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 RPS29P21-201ENST00000496272 170 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 RN7SL636P-201ENST00000497504 294 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 RNA5SP137-201ENST00000516833 135 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 U2.15-201ENST00000611544 191 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 U2.16-201ENST00000613119 191 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 U2.12-201ENST00000613778 191 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 U2.20-201ENST00000613956 192 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 U2.9-201ENST00000615427 191 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 U2.11-201ENST00000616345 191 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 U2.2-201ENST00000616535 191 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 U2.3-201ENST00000617785 191 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 U2.19-201ENST00000618602 191 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 RNU2-1-201ENST00000618664 191 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 U2.6-201ENST00000619225 191 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 U2.5-201ENST00000619465 191 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 U2.10-201ENST00000620268 191 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 CTSLP2-204ENST00000629029 392 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 CENPCP1-201ENST00000533085 2578 ntBASIC2.52□□□□□ -2.01
PCDHB1Q9Y5F3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
PCDHB1Q9Y5F3 AC016909.1-201ENST00000415916 166 ntBASIC2.51□□□□□ -2.01
PCDHB1Q9Y5F3 Z98742.3-201ENST00000418637 326 ntBASIC2.51□□□□□ -2.01
PCDHB1Q9Y5F3 AC060773.1-201ENST00000421698 310 ntBASIC2.51□□□□□ -2.01
PCDHB1Q9Y5F3 BTF3P11-201ENST00000426582 477 ntBASIC2.51□□□□□ -2.01
PCDHB1Q9Y5F3 SUMO1P4-201ENST00000429430 302 ntBASIC2.51□□□□□ -2.01
PCDHB1Q9Y5F3 CR769767.1-201ENST00000436337 346 ntBASIC2.51□□□□□ -2.01
PCDHB1Q9Y5F3 AL353689.1-201ENST00000438895 199 ntBASIC2.51□□□□□ -2.01
PCDHB1Q9Y5F3 HSPE1P13-201ENST00000451143 297 ntBASIC2.51□□□□□ -2.01
PCDHB1Q9Y5F3 RNA5SP320-201ENST00000516263 124 ntBASIC2.51□□□□□ -2.01
PCDHB1Q9Y5F3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.51□□□□□ -2.01
PCDHB1Q9Y5F3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.51□□□□□ -2.01
PCDHB1Q9Y5F3 AC009127.3-201ENST00000570531 403 ntBASIC2.51□□□□□ -2.01
PCDHB1Q9Y5F3 MIR3133-201ENST00000583157 78 ntBASIC2.51□□□□□ -2.01
PCDHB1Q9Y5F3 MIR4658-201ENST00000584344 65 ntBASIC2.51□□□□□ -2.01
PCDHB1Q9Y5F3 Z83818.1-201ENST00000603584 150 ntBASIC2.51□□□□□ -2.01
PCDHB1Q9Y5F3 AC021753.1-201ENST00000635724 168 ntBASIC2.51□□□□□ -2.01
PCDHB1Q9Y5F3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PCDHB1Q9Y5F3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
PCDHB1Q9Y5F3 Y_RNA.456-201ENST00000384232 111 ntBASIC2.5□□□□□ -2.01
PCDHB1Q9Y5F3 MIR27B-201ENST00000385129 97 ntBASIC2.5□□□□□ -2.01
PCDHB1Q9Y5F3 U8.19-201ENST00000459095 133 ntBASIC2.5□□□□□ -2.01
PCDHB1Q9Y5F3 snoU13.15-201ENST00000459407 104 ntBASIC2.5□□□□□ -2.01
PCDHB1Q9Y5F3 COX6CP14-201ENST00000469580 174 ntBASIC2.5□□□□□ -2.01
PCDHB1Q9Y5F3 HMGB3P3-201ENST00000510526 400 ntBASIC2.5□□□□□ -2.01
PCDHB1Q9Y5F3 AC011406.1-201ENST00000512440 370 ntBASIC2.5□□□□□ -2.01
PCDHB1Q9Y5F3 RNA5SP20-201ENST00000515976 84 ntBASIC2.5□□□□□ -2.01
PCDHB1Q9Y5F3 RNU6-1219P-201ENST00000516143 112 ntBASIC2.5□□□□□ -2.01
PCDHB1Q9Y5F3 AC136628.3-201ENST00000521868 290 ntBASIC2.5□□□□□ -2.01
PCDHB1Q9Y5F3 MIR3670-2-201ENST00000582974 65 ntBASIC2.5□□□□□ -2.01
PCDHB1Q9Y5F3 MIR3670-1-201ENST00000584160 65 ntBASIC2.5□□□□□ -2.01
PCDHB1Q9Y5F3 MIR3670-3-201ENST00000584855 65 ntBASIC2.5□□□□□ -2.01
PCDHB1Q9Y5F3 MIR3670-4-201ENST00000612260 65 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms