Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 RNU5A-5P-201ENST00000411054 116 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 AC009161.1-201ENST00000417306 376 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.65□□□□□ -2.31
LRRC42Q9Y546 MTND4LP16-201ENST00000440828 295 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 RPS29P25-201ENST00000481709 171 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 PDCD5P2-201ENST00000507570 312 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 TRMT112P2-201ENST00000512910 132 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 RNU7-12P-201ENST00000516030 62 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.65□□□□□ -2.31
LRRC42Q9Y546 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.65□□□□□ -2.31
LRRC42Q9Y546 AC005014.2-201ENST00000607795 599 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 AC004832.4-201ENST00000608952 331 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 AC015540.1-201ENST00000615828 501 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
LRRC42Q9Y546 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.65□□□□□ -2.31
LRRC42Q9Y546 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
LRRC42Q9Y546 MIR410-201ENST00000362222 80 ntBASIC0.64□□□□□ -2.31
LRRC42Q9Y546 Y_RNA.301-201ENST00000364990 103 ntBASIC0.64□□□□□ -2.31
LRRC42Q9Y546 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
LRRC42Q9Y546 RNU6-1013P-201ENST00000384180 107 ntBASIC0.64□□□□□ -2.31
LRRC42Q9Y546 Y_RNA.450-201ENST00000384198 113 ntBASIC0.64□□□□□ -2.31
LRRC42Q9Y546 MIR200A-201ENST00000384875 90 ntBASIC0.64□□□□□ -2.31
LRRC42Q9Y546 MIR526A1-201ENST00000384897 85 ntBASIC0.64□□□□□ -2.31
LRRC42Q9Y546 MIR190B-201ENST00000401119 79 ntBASIC0.64□□□□□ -2.31
LRRC42Q9Y546 RNA5SP118-201ENST00000410385 109 ntBASIC0.64□□□□□ -2.31
LRRC42Q9Y546 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.64□□□□□ -2.31
LRRC42Q9Y546 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.64□□□□□ -2.31
LRRC42Q9Y546 RPL39P39-201ENST00000455840 151 ntBASIC0.64□□□□□ -2.31
LRRC42Q9Y546 snoU13.25-201ENST00000458945 104 ntBASIC0.64□□□□□ -2.31
LRRC42Q9Y546 RNU6-197P-201ENST00000516680 100 ntBASIC0.64□□□□□ -2.31
LRRC42Q9Y546 MIR4498-201ENST00000577599 66 ntBASIC0.64□□□□□ -2.31
LRRC42Q9Y546 MIR4698-201ENST00000577795 80 ntBASIC0.64□□□□□ -2.31
LRRC42Q9Y546 MIR4790-201ENST00000577799 79 ntBASIC0.64□□□□□ -2.31
LRRC42Q9Y546 AC005828.6-201ENST00000606610 232 ntBASIC0.64□□□□□ -2.31
LRRC42Q9Y546 AL096861.1-201ENST00000610899 123 ntBASIC0.64□□□□□ -2.31
LRRC42Q9Y546 U6.115-201ENST00000636045 103 ntBASIC0.64□□□□□ -2.31
LRRC42Q9Y546 Y_RNA.364-201ENST00000365532 101 ntBASIC0.63□□□□□ -2.31
LRRC42Q9Y546 Y_RNA.473-201ENST00000384333 102 ntBASIC0.63□□□□□ -2.31
LRRC42Q9Y546 SNORA75.2-201ENST00000391138 150 ntBASIC0.63□□□□□ -2.31
LRRC42Q9Y546 SNORA75.3-201ENST00000391231 150 ntBASIC0.63□□□□□ -2.31
LRRC42Q9Y546 AC004941.2-201ENST00000427009 228 ntBASIC0.63□□□□□ -2.31
LRRC42Q9Y546 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.63□□□□□ -2.31
LRRC42Q9Y546 MTND5P5-201ENST00000503764 376 ntBASIC0.63□□□□□ -2.31
LRRC42Q9Y546 RNU6-1278P-201ENST00000516130 107 ntBASIC0.63□□□□□ -2.31
LRRC42Q9Y546 SNORD111.1-201ENST00000516421 86 ntBASIC0.63□□□□□ -2.31
LRRC42Q9Y546 RNU6-1116P-201ENST00000517269 99 ntBASIC0.63□□□□□ -2.31
LRRC42Q9Y546 AC105029.1-201ENST00000520250 669 ntBASIC0.63□□□□□ -2.31
LRRC42Q9Y546 MIR4769-201ENST00000584126 77 ntBASIC0.63□□□□□ -2.31
LRRC42Q9Y546 AC018462.2-201ENST00000605375 395 ntBASIC0.63□□□□□ -2.31
LRRC42Q9Y546 AC104260.1-201ENST00000616660 539 ntBASIC0.63□□□□□ -2.31
LRRC42Q9Y546 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.63□□□□□ -2.31
LRRC42Q9Y546 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.62□□□□□ -2.31
LRRC42Q9Y546 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
LRRC42Q9Y546 RNY1P10-201ENST00000363268 113 ntBASIC0.62□□□□□ -2.31
LRRC42Q9Y546 RNU6-454P-201ENST00000364292 107 ntBASIC0.62□□□□□ -2.31
LRRC42Q9Y546 RNU4-41P-201ENST00000364426 143 ntBASIC0.62□□□□□ -2.31
LRRC42Q9Y546 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
LRRC42Q9Y546 MIR873-201ENST00000401120 77 ntBASIC0.62□□□□□ -2.31
LRRC42Q9Y546 Z98949.2-201ENST00000440996 144 ntBASIC0.62□□□□□ -2.31
LRRC42Q9Y546 PCNPP5-201ENST00000452246 481 ntBASIC0.62□□□□□ -2.31
LRRC42Q9Y546 U8.22-201ENST00000459141 133 ntBASIC0.62□□□□□ -2.31
LRRC42Q9Y546 RNU7-21P-201ENST00000459430 62 ntBASIC0.62□□□□□ -2.31
LRRC42Q9Y546 AC026782.1-201ENST00000512952 449 ntBASIC0.62□□□□□ -2.31
LRRC42Q9Y546 AC108729.3-201ENST00000513484 108 ntBASIC0.62□□□□□ -2.31
LRRC42Q9Y546 AC074133.1-201ENST00000515696 183 ntBASIC0.62□□□□□ -2.31
LRRC42Q9Y546 AC018448.1-201ENST00000552843 316 ntBASIC0.62□□□□□ -2.31
LRRC42Q9Y546 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.62□□□□□ -2.31
LRRC42Q9Y546 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.62□□□□□ -2.31
LRRC42Q9Y546 PRELID3BP2-201ENST00000605362 201 ntBASIC0.62□□□□□ -2.31
LRRC42Q9Y546 AC108706.1-201ENST00000611053 297 ntBASIC0.62□□□□□ -2.31
LRRC42Q9Y546 AL391903.3-201ENST00000612158 163 ntBASIC0.62□□□□□ -2.31
LRRC42Q9Y546 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.62□□□□□ -2.31
LRRC42Q9Y546 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
LRRC42Q9Y546 Y_RNA.295-201ENST00000364918 102 ntBASIC0.61□□□□□ -2.31
LRRC42Q9Y546 RNU4-12P-201ENST00000365233 139 ntBASIC0.61□□□□□ -2.31
LRRC42Q9Y546 Y_RNA.557-201ENST00000384680 107 ntBASIC0.61□□□□□ -2.31
LRRC42Q9Y546 MIR520G-201ENST00000385064 90 ntBASIC0.61□□□□□ -2.31
LRRC42Q9Y546 AL139396.1-201ENST00000421137 167 ntBASIC0.61□□□□□ -2.31
LRRC42Q9Y546 AC245047.8-201ENST00000456455 284 ntBASIC0.61□□□□□ -2.31
LRRC42Q9Y546 LINC01399-202ENST00000458450 244 ntBASIC0.61□□□□□ -2.31
LRRC42Q9Y546 RNU7-87P-201ENST00000459343 62 ntBASIC0.61□□□□□ -2.31
LRRC42Q9Y546 AL049830.1-201ENST00000468034 425 ntBASIC0.61□□□□□ -2.31
LRRC42Q9Y546 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.61□□□□□ -2.31
LRRC42Q9Y546 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.61□□□□□ -2.31
LRRC42Q9Y546 RNU6-237P-201ENST00000515985 71 ntBASIC0.61□□□□□ -2.31
LRRC42Q9Y546 RNU4-49P-201ENST00000516080 140 ntBASIC0.61□□□□□ -2.31
LRRC42Q9Y546 RNU6-1096P-201ENST00000517089 102 ntBASIC0.61□□□□□ -2.31
LRRC42Q9Y546 AL358944.1-201ENST00000528537 144 ntBASIC0.61□□□□□ -2.31
LRRC42Q9Y546 EIF1P4-201ENST00000572664 335 ntBASIC0.61□□□□□ -2.31
LRRC42Q9Y546 AC127459.3-201ENST00000624328 466 ntBASIC0.61□□□□□ -2.31
LRRC42Q9Y546 RNU6-879P-201ENST00000364328 108 ntBASIC0.6□□□□□ -2.31
LRRC42Q9Y546 RNU6-318P-201ENST00000384283 103 ntBASIC0.6□□□□□ -2.31
LRRC42Q9Y546 SNORD116-13-201ENST00000384408 92 ntBASIC0.6□□□□□ -2.31
LRRC42Q9Y546 MIR942-201ENST00000401111 86 ntBASIC0.6□□□□□ -2.31
LRRC42Q9Y546 RPS3AP1-201ENST00000413190 320 ntBASIC0.6□□□□□ -2.31
LRRC42Q9Y546 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.6□□□□□ -2.31
LRRC42Q9Y546 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.6□□□□□ -2.31
LRRC42Q9Y546 AC233266.1-201ENST00000454518 96 ntBASIC0.6□□□□□ -2.31
LRRC42Q9Y546 RNU6-625P-201ENST00000459412 107 ntBASIC0.6□□□□□ -2.31
LRRC42Q9Y546 AC005840.1-201ENST00000498412 377 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms