Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL020996.3-201ENST00000606617 222 ntBASIC0.83□□□□□ -2.28
KCNIP3Q9Y2W7 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.83□□□□□ -2.28
KCNIP3Q9Y2W7 AC127459.3-201ENST00000624328 466 ntBASIC0.83□□□□□ -2.28
KCNIP3Q9Y2W7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
KCNIP3Q9Y2W7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
KCNIP3Q9Y2W7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.82□□□□□ -2.28
KCNIP3Q9Y2W7 RNU4-40P-201ENST00000364351 143 ntBASIC0.82□□□□□ -2.28
KCNIP3Q9Y2W7 Y_RNA.243-201ENST00000364481 109 ntBASIC0.82□□□□□ -2.28
KCNIP3Q9Y2W7 Y_RNA.358-201ENST00000365491 99 ntBASIC0.82□□□□□ -2.28
KCNIP3Q9Y2W7 Y_RNA.482-201ENST00000384377 111 ntBASIC0.82□□□□□ -2.28
KCNIP3Q9Y2W7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.82□□□□□ -2.28
KCNIP3Q9Y2W7 POLR2J4-204ENST00000418424 324 ntBASIC0.82□□□□□ -2.28
KCNIP3Q9Y2W7 AC002429.1-201ENST00000437672 148 ntBASIC0.82□□□□□ -2.28
KCNIP3Q9Y2W7 MTND3P10-201ENST00000450967 341 ntBASIC0.82□□□□□ -2.28
KCNIP3Q9Y2W7 AC107399.1-201ENST00000451226 265 ntBASIC0.82□□□□□ -2.28
KCNIP3Q9Y2W7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.82□□□□□ -2.28
KCNIP3Q9Y2W7 RPL7P42-201ENST00000481005 679 ntBASIC0.82□□□□□ -2.28
KCNIP3Q9Y2W7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.82□□□□□ -2.28
KCNIP3Q9Y2W7 RNU6-947P-201ENST00000516264 106 ntBASIC0.82□□□□□ -2.28
KCNIP3Q9Y2W7 MIR4661-201ENST00000582720 75 ntBASIC0.82□□□□□ -2.28
KCNIP3Q9Y2W7 AC005899.2-201ENST00000584353 90 ntBASIC0.82□□□□□ -2.28
KCNIP3Q9Y2W7 BNIP3P10-201ENST00000605360 577 ntBASIC0.82□□□□□ -2.28
KCNIP3Q9Y2W7 AC004832.4-201ENST00000608952 331 ntBASIC0.82□□□□□ -2.28
KCNIP3Q9Y2W7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
KCNIP3Q9Y2W7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
KCNIP3Q9Y2W7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
KCNIP3Q9Y2W7 Y_RNA.6-201ENST00000362350 114 ntBASIC0.81□□□□□ -2.28
KCNIP3Q9Y2W7 SNORA80D-201ENST00000384488 135 ntBASIC0.81□□□□□ -2.28
KCNIP3Q9Y2W7 RNA5SP475-201ENST00000410568 110 ntBASIC0.81□□□□□ -2.28
KCNIP3Q9Y2W7 BTF3P4-201ENST00000418852 495 ntBASIC0.81□□□□□ -2.28
KCNIP3Q9Y2W7 AC092423.1-201ENST00000430165 186 ntBASIC0.81□□□□□ -2.28
KCNIP3Q9Y2W7 MTND1P34-201ENST00000438556 671 ntBASIC0.81□□□□□ -2.28
KCNIP3Q9Y2W7 AC104332.1-201ENST00000440471 797 ntBASIC0.81□□□□□ -2.28
KCNIP3Q9Y2W7 Z98949.2-201ENST00000440996 144 ntBASIC0.81□□□□□ -2.28
KCNIP3Q9Y2W7 AL049830.1-201ENST00000468034 425 ntBASIC0.81□□□□□ -2.28
KCNIP3Q9Y2W7 RPS26P48-201ENST00000491713 339 ntBASIC0.81□□□□□ -2.28
KCNIP3Q9Y2W7 AC116353.2-201ENST00000505332 712 ntBASIC0.81□□□□□ -2.28
KCNIP3Q9Y2W7 RNU6-1096P-201ENST00000517089 102 ntBASIC0.81□□□□□ -2.28
KCNIP3Q9Y2W7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.81□□□□□ -2.28
KCNIP3Q9Y2W7 RNU6-1301P-201ENST00000362724 104 ntBASIC0.8□□□□□ -2.28
KCNIP3Q9Y2W7 Y_RNA.88-201ENST00000363029 99 ntBASIC0.8□□□□□ -2.28
KCNIP3Q9Y2W7 RNU6-833P-201ENST00000363486 107 ntBASIC0.8□□□□□ -2.28
KCNIP3Q9Y2W7 RNU4-41P-201ENST00000364426 143 ntBASIC0.8□□□□□ -2.28
KCNIP3Q9Y2W7 RNU4-38P-201ENST00000364472 129 ntBASIC0.8□□□□□ -2.28
KCNIP3Q9Y2W7 SNORD114-24-201ENST00000365029 72 ntBASIC0.8□□□□□ -2.28
KCNIP3Q9Y2W7 Y_RNA.404-201ENST00000383978 102 ntBASIC0.8□□□□□ -2.28
KCNIP3Q9Y2W7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.8□□□□□ -2.28
KCNIP3Q9Y2W7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.8□□□□□ -2.28
KCNIP3Q9Y2W7 MIR2355-201ENST00000517199 87 ntBASIC0.8□□□□□ -2.28
KCNIP3Q9Y2W7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.8□□□□□ -2.28
KCNIP3Q9Y2W7 AC060780.3-201ENST00000589464 80 ntBASIC0.8□□□□□ -2.28
KCNIP3Q9Y2W7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.8□□□□□ -2.28
KCNIP3Q9Y2W7 AC007014.2-201ENST00000615581 479 ntBASIC0.8□□□□□ -2.28
KCNIP3Q9Y2W7 AC092794.2-201ENST00000620933 563 ntBASIC0.8□□□□□ -2.28
KCNIP3Q9Y2W7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.8□□□□□ -2.28
KCNIP3Q9Y2W7 RNU6-969P-201ENST00000383900 105 ntBASIC0.79□□□□□ -2.28
KCNIP3Q9Y2W7 RNU6-1310P-201ENST00000384153 107 ntBASIC0.79□□□□□ -2.28
KCNIP3Q9Y2W7 MIR200A-201ENST00000384875 90 ntBASIC0.79□□□□□ -2.28
KCNIP3Q9Y2W7 MIR526A1-201ENST00000384897 85 ntBASIC0.79□□□□□ -2.28
KCNIP3Q9Y2W7 MIR891A-201ENST00000401237 79 ntBASIC0.79□□□□□ -2.28
KCNIP3Q9Y2W7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.79□□□□□ -2.28
KCNIP3Q9Y2W7 AC233266.1-201ENST00000454518 96 ntBASIC0.79□□□□□ -2.28
KCNIP3Q9Y2W7 LINC01399-202ENST00000458450 244 ntBASIC0.79□□□□□ -2.28
KCNIP3Q9Y2W7 SNORD124-201ENST00000459577 104 ntBASIC0.79□□□□□ -2.28
KCNIP3Q9Y2W7 RPL17P19-201ENST00000489069 552 ntBASIC0.79□□□□□ -2.28
KCNIP3Q9Y2W7 SNORD111.1-201ENST00000516421 86 ntBASIC0.79□□□□□ -2.28
KCNIP3Q9Y2W7 SCARNA16.2-201ENST00000516520 172 ntBASIC0.79□□□□□ -2.28
KCNIP3Q9Y2W7 RNU6-307P-201ENST00000516743 106 ntBASIC0.79□□□□□ -2.28
KCNIP3Q9Y2W7 AC013244.2-201ENST00000603396 103 ntBASIC0.79□□□□□ -2.28
KCNIP3Q9Y2W7 AC242852.1-201ENST00000612151 96 ntBASIC0.79□□□□□ -2.28
KCNIP3Q9Y2W7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.79□□□□□ -2.28
KCNIP3Q9Y2W7 AL157834.3-201ENST00000615543 103 ntBASIC0.79□□□□□ -2.28
KCNIP3Q9Y2W7 AC244015.1-201ENST00000622301 99 ntBASIC0.79□□□□□ -2.28
KCNIP3Q9Y2W7 AC005858.4-201ENST00000623191 700 ntBASIC0.79□□□□□ -2.28
KCNIP3Q9Y2W7 AC027279.3-201ENST00000625055 122 ntBASIC0.79□□□□□ -2.28
KCNIP3Q9Y2W7 Y_RNA.72-201ENST00000362894 103 ntBASIC0.78□□□□□ -2.28
KCNIP3Q9Y2W7 RNU1-36P-201ENST00000365130 165 ntBASIC0.78□□□□□ -2.28
KCNIP3Q9Y2W7 MIR1289-2-201ENST00000408360 111 ntBASIC0.78□□□□□ -2.28
KCNIP3Q9Y2W7 SNORD12B-201ENST00000410433 91 ntBASIC0.78□□□□□ -2.28
KCNIP3Q9Y2W7 AC114482.1-201ENST00000418010 247 ntBASIC0.78□□□□□ -2.28
KCNIP3Q9Y2W7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.78□□□□□ -2.28
KCNIP3Q9Y2W7 AC069439.1-201ENST00000494739 167 ntBASIC0.78□□□□□ -2.28
KCNIP3Q9Y2W7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.78□□□□□ -2.28
KCNIP3Q9Y2W7 CYCTP-201ENST00000504253 315 ntBASIC0.78□□□□□ -2.28
KCNIP3Q9Y2W7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.78□□□□□ -2.28
KCNIP3Q9Y2W7 RNU6-63P-201ENST00000516690 95 ntBASIC0.78□□□□□ -2.28
KCNIP3Q9Y2W7 AC136932.1-201ENST00000574771 208 ntBASIC0.78□□□□□ -2.28
KCNIP3Q9Y2W7 AC120024.3-201ENST00000603167 156 ntBASIC0.78□□□□□ -2.28
KCNIP3Q9Y2W7 PRELID3BP2-201ENST00000605362 201 ntBASIC0.78□□□□□ -2.28
KCNIP3Q9Y2W7 AL096861.1-201ENST00000610899 123 ntBASIC0.78□□□□□ -2.28
KCNIP3Q9Y2W7 MIR6078-201ENST00000611069 100 ntBASIC0.78□□□□□ -2.28
KCNIP3Q9Y2W7 PISRT1.1-201ENST00000616930 107 ntBASIC0.78□□□□□ -2.28
KCNIP3Q9Y2W7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
KCNIP3Q9Y2W7 SNORD115-30-201ENST00000364117 82 ntBASIC0.77□□□□□ -2.29
KCNIP3Q9Y2W7 Y_RNA.336-201ENST00000365307 109 ntBASIC0.77□□□□□ -2.29
KCNIP3Q9Y2W7 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
KCNIP3Q9Y2W7 ELOCP24-201ENST00000456370 334 ntBASIC0.77□□□□□ -2.29
KCNIP3Q9Y2W7 AC245047.8-201ENST00000456455 284 ntBASIC0.77□□□□□ -2.29
KCNIP3Q9Y2W7 Y_RNA.655-201ENST00000515919 96 ntBASIC0.77□□□□□ -2.29
KCNIP3Q9Y2W7 SNORA70.12-201ENST00000516084 153 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms