Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 RPS29P28-201ENST00000446439 141 ntBASIC1.27□□□□□ -2.21
SMC3Q9UQE7 RPS27P1-201ENST00000450552 247 ntBASIC1.27□□□□□ -2.21
SMC3Q9UQE7 RPS26P45-201ENST00000471748 340 ntBASIC1.27□□□□□ -2.21
SMC3Q9UQE7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.27□□□□□ -2.21
SMC3Q9UQE7 AC093303.1-201ENST00000514549 295 ntBASIC1.27□□□□□ -2.21
SMC3Q9UQE7 CYP3A52P-201ENST00000563326 91 ntBASIC1.27□□□□□ -2.21
SMC3Q9UQE7 AL929325.1-201ENST00000603096 117 ntBASIC1.27□□□□□ -2.21
SMC3Q9UQE7 AL359075.3-201ENST00000613288 217 ntBASIC1.27□□□□□ -2.21
SMC3Q9UQE7 RNA5SP327-201ENST00000362494 101 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 Y_RNA.80-201ENST00000362996 102 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 RNU6-961P-201ENST00000363893 105 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 Y_RNA.364-201ENST00000365532 101 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SMC3Q9UQE7 Y_RNA.485-201ENST00000384395 102 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 RNU6-136P-201ENST00000384663 107 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 MIR559-201ENST00000385188 96 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 RNU6-700P-201ENST00000391043 107 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 RPL21P1-201ENST00000399532 476 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 Y_RNA.595-201ENST00000410403 105 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 AC004965.1-201ENST00000413033 213 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 SNORD65B-201ENST00000459126 73 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 Y_RNA.632-201ENST00000459189 102 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 RNU7-34P-201ENST00000459394 64 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 Y_RNA.683-201ENST00000516508 93 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 RNU6-63P-201ENST00000516690 95 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 RNU6-699P-201ENST00000517081 110 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.26□□□□□ -2.21
SMC3Q9UQE7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.26□□□□□ -2.21
SMC3Q9UQE7 AC090617.3-201ENST00000573670 475 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.26□□□□□ -2.21
SMC3Q9UQE7 Y_RNA.804-201ENST00000615262 101 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 AC018630.2-201ENST00000534866 2403 ntBASIC1.26□□□□□ -2.21
SMC3Q9UQE7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
SMC3Q9UQE7 AL391987.6-201ENST00000305671 199 ntBASIC1.25□□□□□ -2.21
SMC3Q9UQE7 MIR337-201ENST00000362281 93 ntBASIC1.25□□□□□ -2.21
SMC3Q9UQE7 MTCYBP4-201ENST00000401524 249 ntBASIC1.25□□□□□ -2.21
SMC3Q9UQE7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.25□□□□□ -2.21
SMC3Q9UQE7 RNU6-1156P-201ENST00000410365 100 ntBASIC1.25□□□□□ -2.21
SMC3Q9UQE7 UQCRBP2-201ENST00000447827 297 ntBASIC1.25□□□□□ -2.21
SMC3Q9UQE7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.25□□□□□ -2.21
SMC3Q9UQE7 Y_RNA.638-201ENST00000459374 113 ntBASIC1.25□□□□□ -2.21
SMC3Q9UQE7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.25□□□□□ -2.21
SMC3Q9UQE7 RPL17P19-201ENST00000489069 552 ntBASIC1.25□□□□□ -2.21
SMC3Q9UQE7 AL512310.8-201ENST00000550183 120 ntBASIC1.25□□□□□ -2.21
SMC3Q9UQE7 MIR4801-201ENST00000582704 82 ntBASIC1.25□□□□□ -2.21
SMC3Q9UQE7 AC012676.2-201ENST00000619258 186 ntBASIC1.25□□□□□ -2.21
SMC3Q9UQE7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.25□□□□□ -2.21
SMC3Q9UQE7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SMC3Q9UQE7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SMC3Q9UQE7 RNU6-1301P-201ENST00000362724 104 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 RNU6-1266P-201ENST00000362794 105 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 Y_RNA.338-201ENST00000365320 114 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 RNU6-1145P-201ENST00000384246 107 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 Y_RNA.496-201ENST00000384444 101 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 SNORD12B-201ENST00000410433 91 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 SNX2P2-201ENST00000424553 323 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.24□□□□□ -2.21
SMC3Q9UQE7 RPEP5-201ENST00000441137 268 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 AC010469.2-201ENST00000496412 480 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 AL133373.1-201ENST00000497098 94 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 AL117351.2-201ENST00000513571 157 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 SNORA40.9-201ENST00000515895 93 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 RNU6-1053P-201ENST00000515930 101 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 Y_RNA.718-201ENST00000517110 102 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 AC023442.1-201ENST00000531247 422 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 AL137100.2-201ENST00000555786 315 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 MIR548S-201ENST00000581352 82 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 UBE2V2P2-201ENST00000587677 504 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 AC113139.1-201ENST00000605049 239 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 AL359821.1-201ENST00000605519 182 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 AC104260.1-201ENST00000616660 539 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.24□□□□□ -2.21
SMC3Q9UQE7 Y_RNA.259-201ENST00000364619 101 ntBASIC1.23□□□□□ -2.21
SMC3Q9UQE7 RNU6-593P-201ENST00000364716 112 ntBASIC1.23□□□□□ -2.21
SMC3Q9UQE7 SNORA22-201ENST00000383907 134 ntBASIC1.23□□□□□ -2.21
SMC3Q9UQE7 SNORA20B-201ENST00000384220 132 ntBASIC1.23□□□□□ -2.21
SMC3Q9UQE7 SNORA22C-201ENST00000384614 134 ntBASIC1.23□□□□□ -2.21
SMC3Q9UQE7 RNY4P36-201ENST00000391116 96 ntBASIC1.23□□□□□ -2.21
SMC3Q9UQE7 SNORA75.6-201ENST00000391318 127 ntBASIC1.23□□□□□ -2.21
SMC3Q9UQE7 MTCYBP10-201ENST00000424905 650 ntBASIC1.23□□□□□ -2.21
SMC3Q9UQE7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.23□□□□□ -2.21
SMC3Q9UQE7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.23□□□□□ -2.21
SMC3Q9UQE7 RNU6-408P-201ENST00000515910 100 ntBASIC1.23□□□□□ -2.21
SMC3Q9UQE7 RNU6-470P-201ENST00000515954 104 ntBASIC1.23□□□□□ -2.21
SMC3Q9UQE7 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.23□□□□□ -2.21
SMC3Q9UQE7 AC018448.1-201ENST00000552843 316 ntBASIC1.23□□□□□ -2.21
SMC3Q9UQE7 AL442163.3-201ENST00000554110 156 ntBASIC1.23□□□□□ -2.21
SMC3Q9UQE7 AC022432.1-201ENST00000595739 310 ntBASIC1.23□□□□□ -2.21
SMC3Q9UQE7 SNORD114-21-201ENST00000606412 72 ntBASIC1.23□□□□□ -2.21
SMC3Q9UQE7 AL365434.2-201ENST00000607979 234 ntBASIC1.23□□□□□ -2.21
SMC3Q9UQE7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SMC3Q9UQE7 RNU6-1123P-201ENST00000362347 106 ntBASIC1.22□□□□□ -2.21
SMC3Q9UQE7 Y_RNA.172-201ENST00000363765 102 ntBASIC1.22□□□□□ -2.21
SMC3Q9UQE7 Y_RNA.314-201ENST00000365114 102 ntBASIC1.22□□□□□ -2.21
SMC3Q9UQE7 RNU6-407P-201ENST00000365280 104 ntBASIC1.22□□□□□ -2.21
SMC3Q9UQE7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.22□□□□□ -2.21
SMC3Q9UQE7 Y_RNA.419-201ENST00000384041 102 ntBASIC1.22□□□□□ -2.21
SMC3Q9UQE7 Y_RNA.592-201ENST00000410274 109 ntBASIC1.22□□□□□ -2.21
SMC3Q9UQE7 RAB28P5-201ENST00000427490 651 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms