Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 TRBV12-1-201ENST00000479785 344 ntBASIC3.48□□□□□ -1.85
CXXC1Q9P0U4 AC018868.1-201ENST00000491307 315 ntBASIC3.48□□□□□ -1.85
CXXC1Q9P0U4 RNU7-99P-201ENST00000516271 62 ntBASIC3.48□□□□□ -1.85
CXXC1Q9P0U4 AL359075.3-201ENST00000613288 217 ntBASIC3.48□□□□□ -1.85
CXXC1Q9P0U4 AP001340.1-201ENST00000624405 217 ntBASIC3.48□□□□□ -1.85
CXXC1Q9P0U4 AC138915.1-201ENST00000565427 1685 ntBASIC3.48□□□□□ -1.85
CXXC1Q9P0U4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.47□□□□□ -1.85
CXXC1Q9P0U4 Y_RNA.796-201ENST00000364268 102 ntBASIC3.47□□□□□ -1.85
CXXC1Q9P0U4 RNU6-283P-201ENST00000364788 107 ntBASIC3.47□□□□□ -1.85
CXXC1Q9P0U4 Y_RNA.799-201ENST00000364992 102 ntBASIC3.47□□□□□ -1.85
CXXC1Q9P0U4 SNORD116-14-201ENST00000383894 92 ntBASIC3.47□□□□□ -1.85
CXXC1Q9P0U4 SNORD116-17-201ENST00000383929 92 ntBASIC3.47□□□□□ -1.85
CXXC1Q9P0U4 SNORD116-15-201ENST00000384445 92 ntBASIC3.47□□□□□ -1.85
CXXC1Q9P0U4 SNORD116-19-201ENST00000384729 92 ntBASIC3.47□□□□□ -1.85
CXXC1Q9P0U4 Y_RNA.629-201ENST00000411368 105 ntBASIC3.47□□□□□ -1.85
CXXC1Q9P0U4 AC009238.1-201ENST00000442165 424 ntBASIC3.47□□□□□ -1.85
CXXC1Q9P0U4 AC009237.6-201ENST00000446969 424 ntBASIC3.47□□□□□ -1.85
CXXC1Q9P0U4 SNORD11-201ENST00000459124 84 ntBASIC3.47□□□□□ -1.85
CXXC1Q9P0U4 AC006483.1-201ENST00000487308 313 ntBASIC3.47□□□□□ -1.85
CXXC1Q9P0U4 RNU6-1333P-201ENST00000516162 93 ntBASIC3.47□□□□□ -1.85
CXXC1Q9P0U4 RNU6-1041P-201ENST00000516254 102 ntBASIC3.47□□□□□ -1.85
CXXC1Q9P0U4 RNU2-56P-201ENST00000516826 190 ntBASIC3.47□□□□□ -1.85
CXXC1Q9P0U4 MIR4662B-201ENST00000579498 81 ntBASIC3.47□□□□□ -1.85
CXXC1Q9P0U4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.47□□□□□ -1.85
CXXC1Q9P0U4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CXXC1Q9P0U4 Y_RNA.71-201ENST00000362892 104 ntBASIC3.46□□□□□ -1.86
CXXC1Q9P0U4 Y_RNA.218-201ENST00000364218 104 ntBASIC3.46□□□□□ -1.86
CXXC1Q9P0U4 RNU6-160P-201ENST00000384591 107 ntBASIC3.46□□□□□ -1.86
CXXC1Q9P0U4 RNA5SP508-201ENST00000411327 119 ntBASIC3.46□□□□□ -1.86
CXXC1Q9P0U4 EEF1A1P41-201ENST00000414667 207 ntBASIC3.46□□□□□ -1.86
CXXC1Q9P0U4 RN7SKP132-201ENST00000516001 208 ntBASIC3.46□□□□□ -1.86
CXXC1Q9P0U4 MIR4524B-201ENST00000581569 115 ntBASIC3.46□□□□□ -1.86
CXXC1Q9P0U4 AL359881.1-201ENST00000602916 267 ntBASIC3.46□□□□□ -1.86
CXXC1Q9P0U4 U7.2-201ENST00000607576 63 ntBASIC3.46□□□□□ -1.86
CXXC1Q9P0U4 U4atac.1-201ENST00000618345 95 ntBASIC3.46□□□□□ -1.86
CXXC1Q9P0U4 AC022149.2-201ENST00000621061 203 ntBASIC3.46□□□□□ -1.86
CXXC1Q9P0U4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CXXC1Q9P0U4 AC092435.3-201ENST00000565538 3654 ntBASIC3.46□□□□□ -1.86
CXXC1Q9P0U4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.45□□□□□ -1.86
CXXC1Q9P0U4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CXXC1Q9P0U4 MIR423-201ENST00000362201 94 ntBASIC3.45□□□□□ -1.86
CXXC1Q9P0U4 RNU6-80P-201ENST00000384195 107 ntBASIC3.45□□□□□ -1.86
CXXC1Q9P0U4 RNU1-89P-201ENST00000384592 164 ntBASIC3.45□□□□□ -1.86
CXXC1Q9P0U4 Y_RNA.584-201ENST00000391090 114 ntBASIC3.45□□□□□ -1.86
CXXC1Q9P0U4 RNA5SP184-201ENST00000411071 108 ntBASIC3.45□□□□□ -1.86
CXXC1Q9P0U4 EDDM3CP-201ENST00000415977 425 ntBASIC3.45□□□□□ -1.86
CXXC1Q9P0U4 AC002075.2-201ENST00000425207 252 ntBASIC3.45□□□□□ -1.86
CXXC1Q9P0U4 AL139132.1-201ENST00000431587 344 ntBASIC3.45□□□□□ -1.86
CXXC1Q9P0U4 OR9P1P-201ENST00000496431 281 ntBASIC3.45□□□□□ -1.86
CXXC1Q9P0U4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.45□□□□□ -1.86
CXXC1Q9P0U4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.45□□□□□ -1.86
CXXC1Q9P0U4 FAM35DP-201ENST00000323387 2712 ntBASIC3.45□□□□□ -1.86
CXXC1Q9P0U4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.45□□□□□ -1.86
CXXC1Q9P0U4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CXXC1Q9P0U4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 SNORA71.1-201ENST00000364523 117 ntBASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 RNU6-1082P-201ENST00000364574 107 ntBASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 RNA5SP205-201ENST00000364653 136 ntBASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 MIR562-201ENST00000384894 95 ntBASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 RN7SKP220-201ENST00000410611 288 ntBASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 AL445687.1-201ENST00000439946 251 ntBASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 AL135938.1-201ENST00000443141 297 ntBASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 AC108938.1-201ENST00000451204 136 ntBASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 AC233266.1-201ENST00000454518 96 ntBASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 RNU1-131P-201ENST00000458943 161 ntBASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 RN7SL636P-201ENST00000497504 294 ntBASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 RNA5SP367-201ENST00000516557 118 ntBASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 RNU1-142P-201ENST00000516682 145 ntBASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 SNORA70.19-201ENST00000516717 90 ntBASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 MIR4319-201ENST00000577285 85 ntBASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 AL353149.1-201ENST00000610667 244 ntBASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 AC242852.1-201ENST00000612151 96 ntBASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 Pinc.1-201ENST00000616452 154 ntBASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 AC244015.1-201ENST00000622301 99 ntBASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 MIR338-201ENST00000636369 67 ntBASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CXXC1Q9P0U4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CXXC1Q9P0U4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CXXC1Q9P0U4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.43□□□□□ -1.86
CXXC1Q9P0U4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CXXC1Q9P0U4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CXXC1Q9P0U4 RNA5SP322-201ENST00000363617 119 ntBASIC3.43□□□□□ -1.86
CXXC1Q9P0U4 RNU6-978P-201ENST00000364371 103 ntBASIC3.43□□□□□ -1.86
CXXC1Q9P0U4 RNU6-915P-201ENST00000364943 103 ntBASIC3.43□□□□□ -1.86
CXXC1Q9P0U4 MIR515-2-201ENST00000384883 83 ntBASIC3.43□□□□□ -1.86
CXXC1Q9P0U4 MIR515-1-201ENST00000384884 83 ntBASIC3.43□□□□□ -1.86
CXXC1Q9P0U4 RNA5SP323-201ENST00000391094 133 ntBASIC3.43□□□□□ -1.86
CXXC1Q9P0U4 RNA5SP229-201ENST00000410809 99 ntBASIC3.43□□□□□ -1.86
CXXC1Q9P0U4 AC018634.1-201ENST00000437554 401 ntBASIC3.43□□□□□ -1.86
CXXC1Q9P0U4 ATP5J2P3-201ENST00000451550 258 ntBASIC3.43□□□□□ -1.86
CXXC1Q9P0U4 RNU7-149P-201ENST00000516739 59 ntBASIC3.43□□□□□ -1.86
CXXC1Q9P0U4 uc_338.1-201ENST00000612113 180 ntBASIC3.43□□□□□ -1.86
CXXC1Q9P0U4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CXXC1Q9P0U4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CXXC1Q9P0U4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms