Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AC009237.6-201ENST00000446969 424 ntBASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 AC245047.8-201ENST00000456455 284 ntBASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 AC003982.1-202ENST00000469928 248 ntBASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 RPL23AP54-201ENST00000495129 419 ntBASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 SCARNA8-201ENST00000515924 131 ntBASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 RNU6-1007P-201ENST00000516586 107 ntBASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 RNU6-453P-201ENST00000516819 85 ntBASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 Y_RNA.703-201ENST00000516846 111 ntBASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 MTND5P41-201ENST00000517498 206 ntBASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 GTF3AP2-201ENST00000557014 266 ntBASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KCMF1Q9P0J7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 Y_RNA.75-201ENST00000362927 97 ntBASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 RNU6-117P-201ENST00000365415 107 ntBASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 Y_RNA.398-201ENST00000383952 99 ntBASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 RNU6-1323P-201ENST00000384025 107 ntBASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 Y_RNA.441-201ENST00000384123 112 ntBASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 SNORD88.1-201ENST00000408684 91 ntBASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 AC010154.1-201ENST00000425857 269 ntBASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 AC104389.3-201ENST00000445629 235 ntBASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 RPL36AP21-201ENST00000490372 323 ntBASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 AC015720.1-201ENST00000565251 277 ntBASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 AC127455.1-201ENST00000565496 145 ntBASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 MIR4744-201ENST00000581563 82 ntBASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 ELOCP29-201ENST00000588193 334 ntBASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 U2.20-201ENST00000613956 192 ntBASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
KCMF1Q9P0J7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.62□□□□□ -1.99
KCMF1Q9P0J7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.62□□□□□ -1.99
KCMF1Q9P0J7 RNU1-22P-201ENST00000363334 158 ntBASIC2.62□□□□□ -1.99
KCMF1Q9P0J7 RNU6-103P-201ENST00000363686 107 ntBASIC2.62□□□□□ -1.99
KCMF1Q9P0J7 RNU6-312P-201ENST00000364629 107 ntBASIC2.62□□□□□ -1.99
KCMF1Q9P0J7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.62□□□□□ -1.99
KCMF1Q9P0J7 SRIP3-201ENST00000413200 219 ntBASIC2.62□□□□□ -1.99
KCMF1Q9P0J7 AC087499.2-201ENST00000432861 149 ntBASIC2.62□□□□□ -1.99
KCMF1Q9P0J7 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.62□□□□□ -1.99
KCMF1Q9P0J7 SEPT7P4-201ENST00000437076 306 ntBASIC2.62□□□□□ -1.99
KCMF1Q9P0J7 AC105272.1-201ENST00000438604 198 ntBASIC2.62□□□□□ -1.99
KCMF1Q9P0J7 AC097462.1-201ENST00000514125 324 ntBASIC2.62□□□□□ -1.99
KCMF1Q9P0J7 RNU7-116P-201ENST00000516940 62 ntBASIC2.62□□□□□ -1.99
KCMF1Q9P0J7 RNU7-172P-201ENST00000517125 64 ntBASIC2.62□□□□□ -1.99
KCMF1Q9P0J7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.62□□□□□ -1.99
KCMF1Q9P0J7 AC079600.2-201ENST00000550076 130 ntBASIC2.62□□□□□ -1.99
KCMF1Q9P0J7 MIR3605-201ENST00000583214 100 ntBASIC2.62□□□□□ -1.99
KCMF1Q9P0J7 ZNF861P-201ENST00000588126 639 ntBASIC2.62□□□□□ -1.99
KCMF1Q9P0J7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
KCMF1Q9P0J7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 MIR26A1-201ENST00000362205 77 ntBASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 Y_RNA.23-201ENST00000362496 106 ntBASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 Y_RNA.229-201ENST00000364347 113 ntBASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 RNU1-112P-201ENST00000364401 164 ntBASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 Y_RNA.272-201ENST00000364696 102 ntBASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 RNU6-275P-201ENST00000364910 107 ntBASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 Y_RNA.357-201ENST00000365487 109 ntBASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 RNU6-417P-201ENST00000384712 107 ntBASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 RNU6-376P-201ENST00000384731 106 ntBASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 MT-TT-201ENST00000387460 66 ntBASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 RNU6-578P-201ENST00000390980 103 ntBASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 AL162725.1-201ENST00000435405 301 ntBASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 AC011406.1-201ENST00000512440 370 ntBASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 RN7SKP132-201ENST00000516001 208 ntBASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 RNU6-346P-201ENST00000516288 111 ntBASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 RPPH1-2P-201ENST00000516688 293 ntBASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 AC108706.1-201ENST00000611053 297 ntBASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 MIR6852-201ENST00000621699 66 ntBASIC2.61□□□□□ -1.99
KCMF1Q9P0J7 Y_RNA.510-201ENST00000384511 114 ntBASIC2.6□□□□□ -1.99
KCMF1Q9P0J7 MIR616-201ENST00000385293 97 ntBASIC2.6□□□□□ -1.99
KCMF1Q9P0J7 AL138827.1-201ENST00000402666 306 ntBASIC2.6□□□□□ -1.99
KCMF1Q9P0J7 MIR1262-201ENST00000408276 93 ntBASIC2.6□□□□□ -1.99
KCMF1Q9P0J7 RNA5SP356-201ENST00000515972 94 ntBASIC2.6□□□□□ -1.99
KCMF1Q9P0J7 RNU7-200P-201ENST00000516105 62 ntBASIC2.6□□□□□ -1.99
KCMF1Q9P0J7 RNU6-1041P-201ENST00000516254 102 ntBASIC2.6□□□□□ -1.99
KCMF1Q9P0J7 NDUFA5P6-201ENST00000542110 379 ntBASIC2.6□□□□□ -1.99
KCMF1Q9P0J7 AL449363.1-201ENST00000617815 186 ntBASIC2.6□□□□□ -1.99
KCMF1Q9P0J7 U4atac.1-201ENST00000618345 95 ntBASIC2.6□□□□□ -1.99
KCMF1Q9P0J7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
KCMF1Q9P0J7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.6□□□□□ -1.99
KCMF1Q9P0J7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KCMF1Q9P0J7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KCMF1Q9P0J7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KCMF1Q9P0J7 Y_RNA.99-201ENST00000363138 105 ntBASIC2.59□□□□□ -1.99
KCMF1Q9P0J7 SNORA25.6-201ENST00000364121 118 ntBASIC2.59□□□□□ -1.99
KCMF1Q9P0J7 SNORD114-6-201ENST00000364393 72 ntBASIC2.59□□□□□ -1.99
KCMF1Q9P0J7 RNU6-1130P-201ENST00000365434 107 ntBASIC2.59□□□□□ -1.99
KCMF1Q9P0J7 SNORD116-18-201ENST00000383961 92 ntBASIC2.59□□□□□ -1.99
KCMF1Q9P0J7 RNU6-1072P-201ENST00000384703 107 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms