Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.54□□□□□ -2.16
HACD3Q9P035 MTND1P14-201ENST00000427400 950 ntBASIC1.54□□□□□ -2.16
HACD3Q9P035 AC005002.2-201ENST00000438228 269 ntBASIC1.54□□□□□ -2.16
HACD3Q9P035 HSPE1P9-201ENST00000440046 311 ntBASIC1.54□□□□□ -2.16
HACD3Q9P035 AC069257.2-201ENST00000441819 155 ntBASIC1.54□□□□□ -2.16
HACD3Q9P035 AL606517.2-201ENST00000442855 241 ntBASIC1.54□□□□□ -2.16
HACD3Q9P035 MRPS10P1-201ENST00000448483 130 ntBASIC1.54□□□□□ -2.16
HACD3Q9P035 SNORD13-201ENST00000459299 104 ntBASIC1.54□□□□□ -2.16
HACD3Q9P035 Y_RNA.631-201ENST00000459607 101 ntBASIC1.54□□□□□ -2.16
HACD3Q9P035 RNU6-475P-201ENST00000516073 104 ntBASIC1.54□□□□□ -2.16
HACD3Q9P035 RNU1-142P-201ENST00000516682 145 ntBASIC1.54□□□□□ -2.16
HACD3Q9P035 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
HACD3Q9P035 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.54□□□□□ -2.16
HACD3Q9P035 AC023442.1-201ENST00000531247 422 ntBASIC1.54□□□□□ -2.16
HACD3Q9P035 MIR4438-201ENST00000585271 93 ntBASIC1.54□□□□□ -2.16
HACD3Q9P035 MIR1302-2-201ENST00000607096 138 ntBASIC1.54□□□□□ -2.16
HACD3Q9P035 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.54□□□□□ -2.16
HACD3Q9P035 AC010205.1-201ENST00000616668 449 ntBASIC1.54□□□□□ -2.16
HACD3Q9P035 MIR7843-201ENST00000622274 79 ntBASIC1.54□□□□□ -2.16
HACD3Q9P035 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HACD3Q9P035 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HACD3Q9P035 SNORA27.1-201ENST00000362604 124 ntBASIC1.53□□□□□ -2.16
HACD3Q9P035 Y_RNA.128-201ENST00000363391 112 ntBASIC1.53□□□□□ -2.16
HACD3Q9P035 Y_RNA.458-201ENST00000384240 102 ntBASIC1.53□□□□□ -2.16
HACD3Q9P035 MIR30A-201ENST00000385092 71 ntBASIC1.53□□□□□ -2.16
HACD3Q9P035 EBAG9P1-201ENST00000418955 543 ntBASIC1.53□□□□□ -2.16
HACD3Q9P035 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.53□□□□□ -2.16
HACD3Q9P035 AC073910.1-201ENST00000445047 438 ntBASIC1.53□□□□□ -2.16
HACD3Q9P035 RPS27P1-201ENST00000450552 247 ntBASIC1.53□□□□□ -2.16
HACD3Q9P035 RPS27P22-201ENST00000478056 241 ntBASIC1.53□□□□□ -2.16
HACD3Q9P035 AC093852.1-201ENST00000503587 266 ntBASIC1.53□□□□□ -2.16
HACD3Q9P035 RNU6-966P-201ENST00000516479 104 ntBASIC1.53□□□□□ -2.16
HACD3Q9P035 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
HACD3Q9P035 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.53□□□□□ -2.16
HACD3Q9P035 AC134503.1-201ENST00000633048 54 ntBASIC1.53□□□□□ -2.16
HACD3Q9P035 AC005592.1-201ENST00000566527 1640 ntBASIC1.52□□□□□ -2.17
HACD3Q9P035 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
HACD3Q9P035 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.52□□□□□ -2.17
HACD3Q9P035 RNU6-661P-201ENST00000362409 107 ntBASIC1.52□□□□□ -2.17
HACD3Q9P035 Y_RNA.28-201ENST00000362554 111 ntBASIC1.52□□□□□ -2.17
HACD3Q9P035 RNU1-22P-201ENST00000363334 158 ntBASIC1.52□□□□□ -2.17
HACD3Q9P035 SNORD115-30-201ENST00000364117 82 ntBASIC1.52□□□□□ -2.17
HACD3Q9P035 SNORA4.2-201ENST00000365313 147 ntBASIC1.52□□□□□ -2.17
HACD3Q9P035 Y_RNA.361-201ENST00000365515 120 ntBASIC1.52□□□□□ -2.17
HACD3Q9P035 SNORA67.6-201ENST00000391093 99 ntBASIC1.52□□□□□ -2.17
HACD3Q9P035 Y_RNA.645-201ENST00000391229 102 ntBASIC1.52□□□□□ -2.17
HACD3Q9P035 MIR1304-201ENST00000408243 91 ntBASIC1.52□□□□□ -2.17
HACD3Q9P035 RNU6-955P-201ENST00000410497 104 ntBASIC1.52□□□□□ -2.17
HACD3Q9P035 RNU2-7P-201ENST00000410794 178 ntBASIC1.52□□□□□ -2.17
HACD3Q9P035 MTCO2P12-201ENST00000427426 682 ntBASIC1.52□□□□□ -2.17
HACD3Q9P035 RNU7-99P-201ENST00000516271 62 ntBASIC1.52□□□□□ -2.17
HACD3Q9P035 AC005176.2-201ENST00000596933 147 ntBASIC1.52□□□□□ -2.17
HACD3Q9P035 RPS29P30-201ENST00000600975 111 ntBASIC1.52□□□□□ -2.17
HACD3Q9P035 AC022217.4-201ENST00000604389 163 ntBASIC1.52□□□□□ -2.17
HACD3Q9P035 AL121655.1-201ENST00000605811 308 ntBASIC1.52□□□□□ -2.17
HACD3Q9P035 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
HACD3Q9P035 Y_RNA.124-201ENST00000363339 93 ntBASIC1.51□□□□□ -2.17
HACD3Q9P035 Y_RNA.230-201ENST00000364348 109 ntBASIC1.51□□□□□ -2.17
HACD3Q9P035 RNU6-407P-201ENST00000365280 104 ntBASIC1.51□□□□□ -2.17
HACD3Q9P035 MIR320A-201ENST00000385302 82 ntBASIC1.51□□□□□ -2.17
HACD3Q9P035 RNU6-360P-201ENST00000390944 104 ntBASIC1.51□□□□□ -2.17
HACD3Q9P035 RNA5SP109-201ENST00000391010 116 ntBASIC1.51□□□□□ -2.17
HACD3Q9P035 MIR873-201ENST00000401120 77 ntBASIC1.51□□□□□ -2.17
HACD3Q9P035 RNU6-1199P-201ENST00000411249 104 ntBASIC1.51□□□□□ -2.17
HACD3Q9P035 AL354751.2-201ENST00000415471 210 ntBASIC1.51□□□□□ -2.17
HACD3Q9P035 HSPE1P24-201ENST00000450782 238 ntBASIC1.51□□□□□ -2.17
HACD3Q9P035 RNU1-98P-201ENST00000458992 160 ntBASIC1.51□□□□□ -2.17
HACD3Q9P035 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.51□□□□□ -2.17
HACD3Q9P035 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.51□□□□□ -2.17
HACD3Q9P035 AC108210.2-201ENST00000503681 201 ntBASIC1.51□□□□□ -2.17
HACD3Q9P035 AC097462.1-201ENST00000514125 324 ntBASIC1.51□□□□□ -2.17
HACD3Q9P035 SNORA25.10-201ENST00000515926 124 ntBASIC1.51□□□□□ -2.17
HACD3Q9P035 RNA5SP20-201ENST00000515976 84 ntBASIC1.51□□□□□ -2.17
HACD3Q9P035 RNA5SP481-201ENST00000516814 122 ntBASIC1.51□□□□□ -2.17
HACD3Q9P035 SNORA31.24-201ENST00000517232 57 ntBASIC1.51□□□□□ -2.17
HACD3Q9P035 AC040926.1-201ENST00000530195 238 ntBASIC1.51□□□□□ -2.17
HACD3Q9P035 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HACD3Q9P035 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HACD3Q9P035 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
HACD3Q9P035 RNU6-60P-201ENST00000364792 103 ntBASIC1.5□□□□□ -2.17
HACD3Q9P035 SNORD14.1-201ENST00000365609 90 ntBASIC1.5□□□□□ -2.17
HACD3Q9P035 SNORA22B-201ENST00000383876 138 ntBASIC1.5□□□□□ -2.17
HACD3Q9P035 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
HACD3Q9P035 MIR764-201ENST00000390811 85 ntBASIC1.5□□□□□ -2.17
HACD3Q9P035 MIR548P-201ENST00000408336 84 ntBASIC1.5□□□□□ -2.17
HACD3Q9P035 RNU2-54P-201ENST00000410299 190 ntBASIC1.5□□□□□ -2.17
HACD3Q9P035 RPEP5-201ENST00000441137 268 ntBASIC1.5□□□□□ -2.17
HACD3Q9P035 SUMO1P2-201ENST00000452524 304 ntBASIC1.5□□□□□ -2.17
HACD3Q9P035 Y_RNA.711-201ENST00000516993 102 ntBASIC1.5□□□□□ -2.17
HACD3Q9P035 AC020661.2-201ENST00000560114 134 ntBASIC1.5□□□□□ -2.17
HACD3Q9P035 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.5□□□□□ -2.17
HACD3Q9P035 MIR4423-201ENST00000580922 80 ntBASIC1.5□□□□□ -2.17
HACD3Q9P035 AL021879.1-201ENST00000611756 288 ntBASIC1.5□□□□□ -2.17
HACD3Q9P035 PART1_1.1-201ENST00000611761 217 ntBASIC1.5□□□□□ -2.17
HACD3Q9P035 SNORD114-7-201ENST00000362520 77 ntBASIC1.49□□□□□ -2.17
HACD3Q9P035 RNU1-17P-201ENST00000363022 152 ntBASIC1.49□□□□□ -2.17
HACD3Q9P035 RNU6-271P-201ENST00000363858 105 ntBASIC1.49□□□□□ -2.17
HACD3Q9P035 RNU1-42P-201ENST00000364033 160 ntBASIC1.49□□□□□ -2.17
HACD3Q9P035 Y_RNA.216-201ENST00000364205 93 ntBASIC1.49□□□□□ -2.17
HACD3Q9P035 Y_RNA.446-201ENST00000384178 104 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms