Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 SNORA20.1-201ENST00000364790 130 ntBASIC2.45□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.489-201ENST00000384410 101 ntBASIC2.45□□□□□ -2.02
MKS1Q9NXB0 RNA5SP323-201ENST00000391094 133 ntBASIC2.45□□□□□ -2.02
MKS1Q9NXB0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.45□□□□□ -2.02
MKS1Q9NXB0 MTND2P29-201ENST00000438595 412 ntBASIC2.45□□□□□ -2.02
MKS1Q9NXB0 RNA5SP233-201ENST00000459153 113 ntBASIC2.45□□□□□ -2.02
MKS1Q9NXB0 RPS27P21-201ENST00000486977 252 ntBASIC2.45□□□□□ -2.02
MKS1Q9NXB0 RPL36AP21-201ENST00000490372 323 ntBASIC2.45□□□□□ -2.02
MKS1Q9NXB0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
MKS1Q9NXB0 MIR21-201ENST00000362134 72 ntBASIC2.44□□□□□ -2.02
MKS1Q9NXB0 RNU6-1272P-201ENST00000362776 107 ntBASIC2.44□□□□□ -2.02
MKS1Q9NXB0 SNORD27-201ENST00000363981 72 ntBASIC2.44□□□□□ -2.02
MKS1Q9NXB0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.44□□□□□ -2.02
MKS1Q9NXB0 SNORA8-201ENST00000384574 139 ntBASIC2.44□□□□□ -2.02
MKS1Q9NXB0 SNORA48.1-201ENST00000390879 135 ntBASIC2.44□□□□□ -2.02
MKS1Q9NXB0 RNA5SP501-201ENST00000410990 112 ntBASIC2.44□□□□□ -2.02
MKS1Q9NXB0 Z92545.1-201ENST00000411782 234 ntBASIC2.44□□□□□ -2.02
MKS1Q9NXB0 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.44□□□□□ -2.02
MKS1Q9NXB0 RPS15AP28-201ENST00000435088 386 ntBASIC2.44□□□□□ -2.02
MKS1Q9NXB0 AC055731.1-201ENST00000474387 401 ntBASIC2.44□□□□□ -2.02
MKS1Q9NXB0 AC079804.2-201ENST00000490376 200 ntBASIC2.44□□□□□ -2.02
MKS1Q9NXB0 AC096725.1-201ENST00000514266 313 ntBASIC2.44□□□□□ -2.02
MKS1Q9NXB0 RNVU1-2-201ENST00000516326 135 ntBASIC2.44□□□□□ -2.02
MKS1Q9NXB0 MIR5094-201ENST00000578766 85 ntBASIC2.44□□□□□ -2.02
MKS1Q9NXB0 LARP7P3-201ENST00000579888 337 ntBASIC2.44□□□□□ -2.02
MKS1Q9NXB0 AL162424.1-201ENST00000602325 221 ntBASIC2.44□□□□□ -2.02
MKS1Q9NXB0 AC073413.2-201ENST00000604332 360 ntBASIC2.44□□□□□ -2.02
MKS1Q9NXB0 BX284668.6-201ENST00000606899 438 ntBASIC2.44□□□□□ -2.02
MKS1Q9NXB0 U4.3-201ENST00000621047 82 ntBASIC2.44□□□□□ -2.02
MKS1Q9NXB0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
MKS1Q9NXB0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
MKS1Q9NXB0 RNU6-859P-201ENST00000362728 107 ntBASIC2.43□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.117-201ENST00000363294 101 ntBASIC2.43□□□□□ -2.02
MKS1Q9NXB0 RNU6-1289P-201ENST00000384431 106 ntBASIC2.43□□□□□ -2.02
MKS1Q9NXB0 RNA5SP511-201ENST00000410487 115 ntBASIC2.43□□□□□ -2.02
MKS1Q9NXB0 AL162725.1-201ENST00000435405 301 ntBASIC2.43□□□□□ -2.02
MKS1Q9NXB0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.43□□□□□ -2.02
MKS1Q9NXB0 MIR4643-201ENST00000577473 78 ntBASIC2.43□□□□□ -2.02
MKS1Q9NXB0 AC069114.2-201ENST00000604699 304 ntBASIC2.43□□□□□ -2.02
MKS1Q9NXB0 AL078604.3-201ENST00000615580 211 ntBASIC2.43□□□□□ -2.02
MKS1Q9NXB0 RNU1-51P-201ENST00000365345 176 ntBASIC2.42□□□□□ -2.02
MKS1Q9NXB0 SNORA72.4-201ENST00000384174 132 ntBASIC2.42□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.476-201ENST00000384347 108 ntBASIC2.42□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.539-201ENST00000384635 107 ntBASIC2.42□□□□□ -2.02
MKS1Q9NXB0 RNU6-136P-201ENST00000384663 107 ntBASIC2.42□□□□□ -2.02
MKS1Q9NXB0 RNU6-376P-201ENST00000384731 106 ntBASIC2.42□□□□□ -2.02
MKS1Q9NXB0 MIR518C-201ENST00000384822 101 ntBASIC2.42□□□□□ -2.02
MKS1Q9NXB0 MIR27B-201ENST00000385129 97 ntBASIC2.42□□□□□ -2.02
MKS1Q9NXB0 RNU6-763P-201ENST00000390865 106 ntBASIC2.42□□□□□ -2.02
MKS1Q9NXB0 SNORA26.5-201ENST00000391215 123 ntBASIC2.42□□□□□ -2.02
MKS1Q9NXB0 AC105272.1-201ENST00000438604 198 ntBASIC2.42□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.637-201ENST00000459424 114 ntBASIC2.42□□□□□ -2.02
MKS1Q9NXB0 RPS26P45-201ENST00000471748 340 ntBASIC2.42□□□□□ -2.02
MKS1Q9NXB0 RPS29P21-201ENST00000496272 170 ntBASIC2.42□□□□□ -2.02
MKS1Q9NXB0 AL163195.1-201ENST00000496941 348 ntBASIC2.42□□□□□ -2.02
MKS1Q9NXB0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.42□□□□□ -2.02
MKS1Q9NXB0 AC015720.1-201ENST00000565251 277 ntBASIC2.42□□□□□ -2.02
MKS1Q9NXB0 U1.36-201ENST00000620684 176 ntBASIC2.42□□□□□ -2.02
MKS1Q9NXB0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
MKS1Q9NXB0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MKS1Q9NXB0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.82-201ENST00000363000 102 ntBASIC2.41□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.92-201ENST00000363043 102 ntBASIC2.41□□□□□ -2.02
MKS1Q9NXB0 RNU6-379P-201ENST00000363813 104 ntBASIC2.41□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.235-201ENST00000364412 102 ntBASIC2.41□□□□□ -2.02
MKS1Q9NXB0 RNU6-1019P-201ENST00000364424 107 ntBASIC2.41□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.306-201ENST00000365015 102 ntBASIC2.41□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.312-201ENST00000365089 102 ntBASIC2.41□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.322-201ENST00000365151 102 ntBASIC2.41□□□□□ -2.02
MKS1Q9NXB0 RNU11-5P-201ENST00000391216 129 ntBASIC2.41□□□□□ -2.02
MKS1Q9NXB0 SNORD58.1-201ENST00000391313 66 ntBASIC2.41□□□□□ -2.02
MKS1Q9NXB0 RNU6-651P-201ENST00000411040 105 ntBASIC2.41□□□□□ -2.02
MKS1Q9NXB0 RNU2-14P-201ENST00000411053 191 ntBASIC2.41□□□□□ -2.02
MKS1Q9NXB0 AL135786.1-201ENST00000415892 214 ntBASIC2.41□□□□□ -2.02
MKS1Q9NXB0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.41□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.650-201ENST00000459002 102 ntBASIC2.41□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.777-201ENST00000516982 102 ntBASIC2.41□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.771-201ENST00000598668 102 ntBASIC2.41□□□□□ -2.02
MKS1Q9NXB0 AC005972.2-201ENST00000604690 348 ntBASIC2.41□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.789-201ENST00000622480 102 ntBASIC2.41□□□□□ -2.02
MKS1Q9NXB0 snoU18.1-201ENST00000629629 71 ntBASIC2.41□□□□□ -2.02
MKS1Q9NXB0 AC068647.2-201ENST00000637380 353 ntBASIC2.41□□□□□ -2.02
MKS1Q9NXB0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.41□□□□□ -2.02
MKS1Q9NXB0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.41□□□□□ -2.02
MKS1Q9NXB0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
MKS1Q9NXB0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.03
MKS1Q9NXB0 Y_RNA.122-201ENST00000363331 96 ntBASIC2.4□□□□□ -2.03
MKS1Q9NXB0 RNU6-1048P-201ENST00000364054 107 ntBASIC2.4□□□□□ -2.03
MKS1Q9NXB0 MIR17-201ENST00000385012 84 ntBASIC2.4□□□□□ -2.03
MKS1Q9NXB0 HMGN2P38-201ENST00000423806 265 ntBASIC2.4□□□□□ -2.03
MKS1Q9NXB0 BTF3P11-201ENST00000426582 477 ntBASIC2.4□□□□□ -2.03
MKS1Q9NXB0 AC245047.4-201ENST00000433189 144 ntBASIC2.4□□□□□ -2.03
MKS1Q9NXB0 HSPE1P21-201ENST00000438283 308 ntBASIC2.4□□□□□ -2.03
MKS1Q9NXB0 AC107083.1-201ENST00000439643 279 ntBASIC2.4□□□□□ -2.03
MKS1Q9NXB0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.4□□□□□ -2.03
MKS1Q9NXB0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.4□□□□□ -2.03
MKS1Q9NXB0 AC084364.2-201ENST00000546924 395 ntBASIC2.4□□□□□ -2.03
MKS1Q9NXB0 SUB1P4-201ENST00000566062 339 ntBASIC2.4□□□□□ -2.03
MKS1Q9NXB0 SNORD53-201ENST00000579969 78 ntBASIC2.4□□□□□ -2.03
MKS1Q9NXB0 MIR4282-201ENST00000583613 67 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms