Protein–RNA interactions for Protein: Q9NX36

DNAJC28, DnaJ homolog subfamily C member 28, humanhuman

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAJC28Q9NX36 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.54□□□□□ -2
DNAJC28Q9NX36 RNU1-52P-201ENST00000384190 164 ntBASIC2.54□□□□□ -2
DNAJC28Q9NX36 Y_RNA.515-201ENST00000384535 112 ntBASIC2.54□□□□□ -2
DNAJC28Q9NX36 RNU6-417P-201ENST00000384712 107 ntBASIC2.54□□□□□ -2
DNAJC28Q9NX36 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.54□□□□□ -2
DNAJC28Q9NX36 AL117342.1-201ENST00000404861 406 ntBASIC2.54□□□□□ -2
DNAJC28Q9NX36 RNU6-651P-201ENST00000411040 105 ntBASIC2.54□□□□□ -2
DNAJC28Q9NX36 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.54□□□□□ -2
DNAJC28Q9NX36 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.54□□□□□ -2
DNAJC28Q9NX36 BX510359.4-201ENST00000423750 193 ntBASIC2.54□□□□□ -2
DNAJC28Q9NX36 AC010409.1-201ENST00000487382 476 ntBASIC2.54□□□□□ -2
DNAJC28Q9NX36 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.54□□□□□ -2
DNAJC28Q9NX36 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.54□□□□□ -2
DNAJC28Q9NX36 AC097462.1-201ENST00000514125 324 ntBASIC2.54□□□□□ -2
DNAJC28Q9NX36 Y_RNA.679-201ENST00000516416 91 ntBASIC2.54□□□□□ -2
DNAJC28Q9NX36 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.54□□□□□ -2
DNAJC28Q9NX36 AC009779.6-201ENST00000603972 165 ntBASIC2.54□□□□□ -2
DNAJC28Q9NX36 AL590808.1-201ENST00000618696 141 ntBASIC2.54□□□□□ -2
DNAJC28Q9NX36 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.54□□□□□ -2
DNAJC28Q9NX36 snoU18.1-201ENST00000629629 71 ntBASIC2.54□□□□□ -2
DNAJC28Q9NX36 ZNF271P-202ENST00000465539 1970 ntBASIC2.54□□□□□ -2
DNAJC28Q9NX36 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.54□□□□□ -2
DNAJC28Q9NX36 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
DNAJC28Q9NX36 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
DNAJC28Q9NX36 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.53□□□□□ -2
DNAJC28Q9NX36 AL356292.1-201ENST00000283110 373 ntBASIC2.53□□□□□ -2
DNAJC28Q9NX36 RNU1-22P-201ENST00000363334 158 ntBASIC2.53□□□□□ -2
DNAJC28Q9NX36 Y_RNA.172-201ENST00000363765 102 ntBASIC2.53□□□□□ -2
DNAJC28Q9NX36 RNU6-117P-201ENST00000365415 107 ntBASIC2.53□□□□□ -2
DNAJC28Q9NX36 RNU6-763P-201ENST00000390865 106 ntBASIC2.53□□□□□ -2
DNAJC28Q9NX36 HMGN2P39-201ENST00000398005 273 ntBASIC2.53□□□□□ -2
DNAJC28Q9NX36 RNU2-14P-201ENST00000411053 191 ntBASIC2.53□□□□□ -2
DNAJC28Q9NX36 RPS20P10-201ENST00000451209 253 ntBASIC2.53□□□□□ -2
DNAJC28Q9NX36 Y_RNA.637-201ENST00000459424 114 ntBASIC2.53□□□□□ -2
DNAJC28Q9NX36 YWHAEP4-201ENST00000505390 198 ntBASIC2.53□□□□□ -2
DNAJC28Q9NX36 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.53□□□□□ -2
DNAJC28Q9NX36 RNA5SP320-201ENST00000516263 124 ntBASIC2.53□□□□□ -2
DNAJC28Q9NX36 SNORA31.15-201ENST00000516771 132 ntBASIC2.53□□□□□ -2
DNAJC28Q9NX36 RNA5SP402-201ENST00000517148 110 ntBASIC2.53□□□□□ -2
DNAJC28Q9NX36 MIR3124-201ENST00000582636 67 ntBASIC2.53□□□□□ -2
DNAJC28Q9NX36 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
DNAJC28Q9NX36 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2.01
DNAJC28Q9NX36 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
DNAJC28Q9NX36 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
DNAJC28Q9NX36 RNU1-96P-201ENST00000364163 162 ntBASIC2.52□□□□□ -2.01
DNAJC28Q9NX36 SNORA72.4-201ENST00000384174 132 ntBASIC2.52□□□□□ -2.01
DNAJC28Q9NX36 MIR518A2-201ENST00000384966 87 ntBASIC2.52□□□□□ -2.01
DNAJC28Q9NX36 MIR27B-201ENST00000385129 97 ntBASIC2.52□□□□□ -2.01
DNAJC28Q9NX36 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.52□□□□□ -2.01
DNAJC28Q9NX36 RPL36AP21-201ENST00000490372 323 ntBASIC2.52□□□□□ -2.01
DNAJC28Q9NX36 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.52□□□□□ -2.01
DNAJC28Q9NX36 RNU7-172P-201ENST00000517125 64 ntBASIC2.52□□□□□ -2.01
DNAJC28Q9NX36 SNORD53-201ENST00000579969 78 ntBASIC2.52□□□□□ -2.01
DNAJC28Q9NX36 AL137847.3-201ENST00000611521 109 ntBASIC2.52□□□□□ -2.01
DNAJC28Q9NX36 U4.3-201ENST00000621047 82 ntBASIC2.52□□□□□ -2.01
DNAJC28Q9NX36 CTSLP2-204ENST00000629029 392 ntBASIC2.52□□□□□ -2.01
DNAJC28Q9NX36 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 RNU6-211P-201ENST00000384047 107 ntBASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 SNORD116-13-201ENST00000384408 92 ntBASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 SNORA26.5-201ENST00000391215 123 ntBASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 MIR1283-2-201ENST00000408621 87 ntBASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 RNA5SP270-201ENST00000411361 118 ntBASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 CST2P1-201ENST00000425770 87 ntBASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 BTF3P11-201ENST00000426582 477 ntBASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 Y_RNA.638-201ENST00000459374 113 ntBASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 RNU6-1278P-201ENST00000516130 107 ntBASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 RNU6-63P-201ENST00000516690 95 ntBASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 AC005786.1-201ENST00000588553 154 ntBASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 AC007229.1-201ENST00000590455 412 ntBASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 AL049779.4-201ENST00000604500 156 ntBASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 AC004832.4-201ENST00000608952 331 ntBASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 AL008718.3-201ENST00000610217 321 ntBASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 AL442067.1-201ENST00000613261 223 ntBASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 AC073349.3-201ENST00000617616 186 ntBASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 AC022513.1-201ENST00000624512 117 ntBASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 AC064859.1-201ENST00000624741 174 ntBASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
DNAJC28Q9NX36 AP006437.1-201ENST00000641440 3685 ntBASIC2.5□□□□□ -2.01
DNAJC28Q9NX36 SNORA3A-201ENST00000364113 130 ntBASIC2.5□□□□□ -2.01
DNAJC28Q9NX36 Y_RNA.292-201ENST00000364904 97 ntBASIC2.5□□□□□ -2.01
DNAJC28Q9NX36 SNORA67.4-201ENST00000384688 142 ntBASIC2.5□□□□□ -2.01
DNAJC28Q9NX36 MIR515-2-201ENST00000384883 83 ntBASIC2.5□□□□□ -2.01
DNAJC28Q9NX36 MIR515-1-201ENST00000384884 83 ntBASIC2.5□□□□□ -2.01
DNAJC28Q9NX36 MIR1261-201ENST00000408659 82 ntBASIC2.5□□□□□ -2.01
DNAJC28Q9NX36 AC007064.1-201ENST00000412238 351 ntBASIC2.5□□□□□ -2.01
DNAJC28Q9NX36 AL139156.1-201ENST00000412785 841 ntBASIC2.5□□□□□ -2.01
DNAJC28Q9NX36 EBAG9P1-201ENST00000418955 543 ntBASIC2.5□□□□□ -2.01
DNAJC28Q9NX36 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.5□□□□□ -2.01
DNAJC28Q9NX36 SNORD116-28-201ENST00000516123 91 ntBASIC2.5□□□□□ -2.01
DNAJC28Q9NX36 RNU7-99P-201ENST00000516271 62 ntBASIC2.5□□□□□ -2.01
DNAJC28Q9NX36 RNA5SP24-201ENST00000516478 95 ntBASIC2.5□□□□□ -2.01
DNAJC28Q9NX36 MIR4446-201ENST00000578505 67 ntBASIC2.5□□□□□ -2.01
DNAJC28Q9NX36 AL359075.3-201ENST00000613288 217 ntBASIC2.5□□□□□ -2.01
DNAJC28Q9NX36 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
DNAJC28Q9NX36 RNU6-862P-201ENST00000362804 105 ntBASIC2.49□□□□□ -2.01
DNAJC28Q9NX36 RNA5SP393-201ENST00000363423 117 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms