Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MTCO2P27-201ENST00000420740 428 ntBASIC1.6□□□□□ -2.15
BLOC1S4Q9NUP1 AL135790.2-201ENST00000437701 267 ntBASIC1.6□□□□□ -2.15
BLOC1S4Q9NUP1 AL137792.2-201ENST00000443484 235 ntBASIC1.6□□□□□ -2.15
BLOC1S4Q9NUP1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.6□□□□□ -2.15
BLOC1S4Q9NUP1 AC023790.1-201ENST00000482174 347 ntBASIC1.6□□□□□ -2.15
BLOC1S4Q9NUP1 AC108210.2-201ENST00000503681 201 ntBASIC1.6□□□□□ -2.15
BLOC1S4Q9NUP1 SNORA31.24-201ENST00000517232 57 ntBASIC1.6□□□□□ -2.15
BLOC1S4Q9NUP1 PRR13P7-201ENST00000605538 430 ntBASIC1.6□□□□□ -2.15
BLOC1S4Q9NUP1 AC127459.3-201ENST00000624328 466 ntBASIC1.6□□□□□ -2.15
BLOC1S4Q9NUP1 SNORD3E-202ENST00000627253 216 ntBASIC1.6□□□□□ -2.15
BLOC1S4Q9NUP1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
BLOC1S4Q9NUP1 Y_RNA.243-201ENST00000364481 109 ntBASIC1.59□□□□□ -2.15
BLOC1S4Q9NUP1 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.59□□□□□ -2.15
BLOC1S4Q9NUP1 STAG3L5P-204ENST00000443759 179 ntBASIC1.59□□□□□ -2.15
BLOC1S4Q9NUP1 MTCO3P10-201ENST00000455912 772 ntBASIC1.59□□□□□ -2.15
BLOC1S4Q9NUP1 RNU6-408P-201ENST00000515910 100 ntBASIC1.59□□□□□ -2.15
BLOC1S4Q9NUP1 Y_RNA.675-201ENST00000516389 149 ntBASIC1.59□□□□□ -2.15
BLOC1S4Q9NUP1 SUMO2P16-201ENST00000519475 264 ntBASIC1.59□□□□□ -2.15
BLOC1S4Q9NUP1 AL358944.1-201ENST00000528537 144 ntBASIC1.59□□□□□ -2.15
BLOC1S4Q9NUP1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.59□□□□□ -2.15
BLOC1S4Q9NUP1 AL365434.2-201ENST00000607979 234 ntBASIC1.59□□□□□ -2.15
BLOC1S4Q9NUP1 MIR1302-1-201ENST00000637932 143 ntBASIC1.59□□□□□ -2.15
BLOC1S4Q9NUP1 U8.1-201ENST00000362843 134 ntBASIC1.58□□□□□ -2.16
BLOC1S4Q9NUP1 RNU6-454P-201ENST00000364292 107 ntBASIC1.58□□□□□ -2.16
BLOC1S4Q9NUP1 Y_RNA.314-201ENST00000365114 102 ntBASIC1.58□□□□□ -2.16
BLOC1S4Q9NUP1 Y_RNA.390-201ENST00000383932 102 ntBASIC1.58□□□□□ -2.16
BLOC1S4Q9NUP1 SNORD26-201ENST00000384147 75 ntBASIC1.58□□□□□ -2.16
BLOC1S4Q9NUP1 MIR660-201ENST00000385235 97 ntBASIC1.58□□□□□ -2.16
BLOC1S4Q9NUP1 RNY4P36-201ENST00000391116 96 ntBASIC1.58□□□□□ -2.16
BLOC1S4Q9NUP1 AC093019.1-201ENST00000443135 252 ntBASIC1.58□□□□□ -2.16
BLOC1S4Q9NUP1 RPS29P29-201ENST00000456396 171 ntBASIC1.58□□□□□ -2.16
BLOC1S4Q9NUP1 RPL39P38-201ENST00000467018 153 ntBASIC1.58□□□□□ -2.16
BLOC1S4Q9NUP1 AC105758.1-201ENST00000506038 399 ntBASIC1.58□□□□□ -2.16
BLOC1S4Q9NUP1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.58□□□□□ -2.16
BLOC1S4Q9NUP1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
BLOC1S4Q9NUP1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
BLOC1S4Q9NUP1 RNA5SP99-201ENST00000364020 114 ntBASIC1.57□□□□□ -2.16
BLOC1S4Q9NUP1 RNA5SP482-201ENST00000391269 118 ntBASIC1.57□□□□□ -2.16
BLOC1S4Q9NUP1 RNU4-62P-201ENST00000410125 130 ntBASIC1.57□□□□□ -2.16
BLOC1S4Q9NUP1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.57□□□□□ -2.16
BLOC1S4Q9NUP1 AP002001.1-203ENST00000534002 267 ntBASIC1.57□□□□□ -2.16
BLOC1S4Q9NUP1 AL512310.8-201ENST00000550183 120 ntBASIC1.57□□□□□ -2.16
BLOC1S4Q9NUP1 U2.1-201ENST00000618978 145 ntBASIC1.57□□□□□ -2.16
BLOC1S4Q9NUP1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
BLOC1S4Q9NUP1 AP000648.3-201ENST00000623539 4507 ntBASIC1.56□□□□□ -2.16
BLOC1S4Q9NUP1 Y_RNA.267-201ENST00000364679 109 ntBASIC1.56□□□□□ -2.16
BLOC1S4Q9NUP1 RNU6-1040P-201ENST00000383974 107 ntBASIC1.56□□□□□ -2.16
BLOC1S4Q9NUP1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.56□□□□□ -2.16
BLOC1S4Q9NUP1 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.56□□□□□ -2.16
BLOC1S4Q9NUP1 AC091021.1-201ENST00000468051 388 ntBASIC1.56□□□□□ -2.16
BLOC1S4Q9NUP1 RNU6-120P-201ENST00000516077 103 ntBASIC1.56□□□□□ -2.16
BLOC1S4Q9NUP1 RNU6-277P-201ENST00000516272 106 ntBASIC1.56□□□□□ -2.16
BLOC1S4Q9NUP1 AC091178.2-201ENST00000584401 117 ntBASIC1.56□□□□□ -2.16
BLOC1S4Q9NUP1 AL132765.2-201ENST00000610812 351 ntBASIC1.56□□□□□ -2.16
BLOC1S4Q9NUP1 MIR8065-201ENST00000620577 100 ntBASIC1.56□□□□□ -2.16
BLOC1S4Q9NUP1 RNU4-76P-201ENST00000364509 141 ntBASIC1.55□□□□□ -2.16
BLOC1S4Q9NUP1 RNU6-1304P-201ENST00000411374 106 ntBASIC1.55□□□□□ -2.16
BLOC1S4Q9NUP1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.55□□□□□ -2.16
BLOC1S4Q9NUP1 HSPE1P13-201ENST00000451143 297 ntBASIC1.55□□□□□ -2.16
BLOC1S4Q9NUP1 RNU7-169P-201ENST00000459456 61 ntBASIC1.55□□□□□ -2.16
BLOC1S4Q9NUP1 AL163540.1-201ENST00000485382 386 ntBASIC1.55□□□□□ -2.16
BLOC1S4Q9NUP1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.55□□□□□ -2.16
BLOC1S4Q9NUP1 FGF7P4-201ENST00000509595 295 ntBASIC1.55□□□□□ -2.16
BLOC1S4Q9NUP1 RNU2-12P-201ENST00000517216 168 ntBASIC1.55□□□□□ -2.16
BLOC1S4Q9NUP1 AC004467.1-201ENST00000615678 330 ntBASIC1.55□□□□□ -2.16
BLOC1S4Q9NUP1 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.55□□□□□ -2.16
BLOC1S4Q9NUP1 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
BLOC1S4Q9NUP1 Y_RNA.361-201ENST00000365515 120 ntBASIC1.54□□□□□ -2.16
BLOC1S4Q9NUP1 Y_RNA.428-201ENST00000384078 102 ntBASIC1.54□□□□□ -2.16
BLOC1S4Q9NUP1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
BLOC1S4Q9NUP1 RNU6-1009P-201ENST00000390996 107 ntBASIC1.54□□□□□ -2.16
BLOC1S4Q9NUP1 RN7SKP51-201ENST00000410781 304 ntBASIC1.54□□□□□ -2.16
BLOC1S4Q9NUP1 AC108667.1-201ENST00000428618 249 ntBASIC1.54□□□□□ -2.16
BLOC1S4Q9NUP1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.54□□□□□ -2.16
BLOC1S4Q9NUP1 AC236972.2-201ENST00000434979 310 ntBASIC1.54□□□□□ -2.16
BLOC1S4Q9NUP1 SNRPGP13-201ENST00000442212 177 ntBASIC1.54□□□□□ -2.16
BLOC1S4Q9NUP1 Y_RNA.718-201ENST00000517110 102 ntBASIC1.54□□□□□ -2.16
BLOC1S4Q9NUP1 AC023442.1-201ENST00000531247 422 ntBASIC1.54□□□□□ -2.16
BLOC1S4Q9NUP1 MIR3664-201ENST00000579074 99 ntBASIC1.54□□□□□ -2.16
BLOC1S4Q9NUP1 MIR4524B-201ENST00000581569 115 ntBASIC1.54□□□□□ -2.16
BLOC1S4Q9NUP1 AC005176.2-201ENST00000596933 147 ntBASIC1.54□□□□□ -2.16
BLOC1S4Q9NUP1 AL513534.2-201ENST00000603836 250 ntBASIC1.54□□□□□ -2.16
BLOC1S4Q9NUP1 AL138825.1-201ENST00000618587 192 ntBASIC1.54□□□□□ -2.16
BLOC1S4Q9NUP1 AL353997.5-201ENST00000618886 171 ntBASIC1.54□□□□□ -2.16
BLOC1S4Q9NUP1 MTND4LP32-201ENST00000636111 270 ntBASIC1.54□□□□□ -2.16
BLOC1S4Q9NUP1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
BLOC1S4Q9NUP1 Y_RNA.27-201ENST00000362540 103 ntBASIC1.53□□□□□ -2.16
BLOC1S4Q9NUP1 Y_RNA.230-201ENST00000364348 109 ntBASIC1.53□□□□□ -2.16
BLOC1S4Q9NUP1 RNU6-117P-201ENST00000365415 107 ntBASIC1.53□□□□□ -2.16
BLOC1S4Q9NUP1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.53□□□□□ -2.16
BLOC1S4Q9NUP1 RNU6-926P-201ENST00000384075 107 ntBASIC1.53□□□□□ -2.16
BLOC1S4Q9NUP1 MIR559-201ENST00000385188 96 ntBASIC1.53□□□□□ -2.16
BLOC1S4Q9NUP1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.53□□□□□ -2.16
BLOC1S4Q9NUP1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.53□□□□□ -2.16
BLOC1S4Q9NUP1 ZNF72P-201ENST00000425869 1908 ntBASIC1.53□□□□□ -2.16
BLOC1S4Q9NUP1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.53□□□□□ -2.16
BLOC1S4Q9NUP1 RN7SKP88-201ENST00000516847 250 ntBASIC1.53□□□□□ -2.16
BLOC1S4Q9NUP1 MIR4801-201ENST00000582704 82 ntBASIC1.53□□□□□ -2.16
BLOC1S4Q9NUP1 VN1R91P-201ENST00000594377 169 ntBASIC1.53□□□□□ -2.16
BLOC1S4Q9NUP1 7SK.8-201ENST00000612110 250 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms