Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 RNU6-1310P-201ENST00000384153 107 ntBASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 RNU6-424P-201ENST00000384367 105 ntBASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 MIR625-201ENST00000385047 85 ntBASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 MTND4P28-201ENST00000426217 387 ntBASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 AC004223.1-201ENST00000479840 271 ntBASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 OR9P1P-201ENST00000496431 281 ntBASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 RNU6-1278P-201ENST00000516130 107 ntBASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 RNA5SP168-201ENST00000516642 112 ntBASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 RNU2-56P-201ENST00000516826 190 ntBASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 RNU6-165P-201ENST00000517170 99 ntBASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 AP002004.2-201ENST00000531656 154 ntBASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 AC015712.3-201ENST00000559380 164 ntBASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 MIR4421-201ENST00000578133 69 ntBASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 AL513534.2-201ENST00000603836 250 ntBASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 AC087588.2-201ENST00000617667 426 ntBASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 AC106754.2-201ENST00000623006 233 ntBASIC1.2□□□□□ -2.22
ZCCHC3Q9NUD5 Y_RNA.124-201ENST00000363339 93 ntBASIC1.19□□□□□ -2.22
ZCCHC3Q9NUD5 RNU4-76P-201ENST00000364509 141 ntBASIC1.19□□□□□ -2.22
ZCCHC3Q9NUD5 Y_RNA.267-201ENST00000364679 109 ntBASIC1.19□□□□□ -2.22
ZCCHC3Q9NUD5 Y_RNA.474-201ENST00000384341 102 ntBASIC1.19□□□□□ -2.22
ZCCHC3Q9NUD5 SNORA69.1-201ENST00000390904 137 ntBASIC1.19□□□□□ -2.22
ZCCHC3Q9NUD5 SNORA11.2-201ENST00000408318 127 ntBASIC1.19□□□□□ -2.22
ZCCHC3Q9NUD5 RNU4-62P-201ENST00000410125 130 ntBASIC1.19□□□□□ -2.22
ZCCHC3Q9NUD5 Y_RNA.592-201ENST00000410274 109 ntBASIC1.19□□□□□ -2.22
ZCCHC3Q9NUD5 RNU6-1156P-201ENST00000410365 100 ntBASIC1.19□□□□□ -2.22
ZCCHC3Q9NUD5 RNU5A-5P-201ENST00000411054 116 ntBASIC1.19□□□□□ -2.22
ZCCHC3Q9NUD5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.19□□□□□ -2.22
ZCCHC3Q9NUD5 CALM2P4-201ENST00000430810 426 ntBASIC1.19□□□□□ -2.22
ZCCHC3Q9NUD5 RNU6-264P-201ENST00000517134 104 ntBASIC1.19□□□□□ -2.22
ZCCHC3Q9NUD5 MIR5690-201ENST00000583739 73 ntBASIC1.19□□□□□ -2.22
ZCCHC3Q9NUD5 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
ZCCHC3Q9NUD5 AL353997.5-201ENST00000618886 171 ntBASIC1.19□□□□□ -2.22
ZCCHC3Q9NUD5 AC127459.3-201ENST00000624328 466 ntBASIC1.19□□□□□ -2.22
ZCCHC3Q9NUD5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.18□□□□□ -2.22
ZCCHC3Q9NUD5 RNU6-199P-201ENST00000362954 107 ntBASIC1.18□□□□□ -2.22
ZCCHC3Q9NUD5 Y_RNA.361-201ENST00000365515 120 ntBASIC1.18□□□□□ -2.22
ZCCHC3Q9NUD5 MIR653-201ENST00000385279 96 ntBASIC1.18□□□□□ -2.22
ZCCHC3Q9NUD5 MIR618-201ENST00000385287 98 ntBASIC1.18□□□□□ -2.22
ZCCHC3Q9NUD5 SNORA40.6-201ENST00000391153 128 ntBASIC1.18□□□□□ -2.22
ZCCHC3Q9NUD5 U8.16-201ENST00000391279 133 ntBASIC1.18□□□□□ -2.22
ZCCHC3Q9NUD5 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.18□□□□□ -2.22
ZCCHC3Q9NUD5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.18□□□□□ -2.22
ZCCHC3Q9NUD5 AL133373.1-201ENST00000497098 94 ntBASIC1.18□□□□□ -2.22
ZCCHC3Q9NUD5 AC022493.2-201ENST00000506122 481 ntBASIC1.18□□□□□ -2.22
ZCCHC3Q9NUD5 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.18□□□□□ -2.22
ZCCHC3Q9NUD5 MIR4778-201ENST00000577635 80 ntBASIC1.18□□□□□ -2.22
ZCCHC3Q9NUD5 AC068647.2-201ENST00000637380 353 ntBASIC1.18□□□□□ -2.22
ZCCHC3Q9NUD5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
ZCCHC3Q9NUD5 RNU6-890P-201ENST00000384121 107 ntBASIC1.17□□□□□ -2.22
ZCCHC3Q9NUD5 RNA5SP482-201ENST00000391269 118 ntBASIC1.17□□□□□ -2.22
ZCCHC3Q9NUD5 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.17□□□□□ -2.22
ZCCHC3Q9NUD5 AC015922.2-201ENST00000435593 184 ntBASIC1.17□□□□□ -2.22
ZCCHC3Q9NUD5 AC009474.2-201ENST00000451383 136 ntBASIC1.17□□□□□ -2.22
ZCCHC3Q9NUD5 RPS29P29-201ENST00000456396 171 ntBASIC1.17□□□□□ -2.22
ZCCHC3Q9NUD5 RNU6-1291P-201ENST00000516591 104 ntBASIC1.17□□□□□ -2.22
ZCCHC3Q9NUD5 RNU6-922P-201ENST00000516753 99 ntBASIC1.17□□□□□ -2.22
ZCCHC3Q9NUD5 RNU7-4P-201ENST00000516961 62 ntBASIC1.17□□□□□ -2.22
ZCCHC3Q9NUD5 RNU2-12P-201ENST00000517216 168 ntBASIC1.17□□□□□ -2.22
ZCCHC3Q9NUD5 AL358944.1-201ENST00000528537 144 ntBASIC1.17□□□□□ -2.22
ZCCHC3Q9NUD5 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.17□□□□□ -2.22
ZCCHC3Q9NUD5 MIR3660-201ENST00000584845 100 ntBASIC1.17□□□□□ -2.22
ZCCHC3Q9NUD5 AC122108.2-201ENST00000611946 526 ntBASIC1.17□□□□□ -2.22
ZCCHC3Q9NUD5 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.17□□□□□ -2.22
ZCCHC3Q9NUD5 AC005592.1-201ENST00000566527 1640 ntBASIC1.17□□□□□ -2.22
ZCCHC3Q9NUD5 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
ZCCHC3Q9NUD5 SNORA25.8-201ENST00000364831 128 ntBASIC1.16□□□□□ -2.22
ZCCHC3Q9NUD5 MIR520G-201ENST00000385064 90 ntBASIC1.16□□□□□ -2.22
ZCCHC3Q9NUD5 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.16□□□□□ -2.22
ZCCHC3Q9NUD5 RNU7-95P-201ENST00000459222 64 ntBASIC1.16□□□□□ -2.22
ZCCHC3Q9NUD5 RNU6-408P-201ENST00000515910 100 ntBASIC1.16□□□□□ -2.22
ZCCHC3Q9NUD5 SNORA20.3-201ENST00000516880 132 ntBASIC1.16□□□□□ -2.22
ZCCHC3Q9NUD5 AC090821.2-201ENST00000523552 176 ntBASIC1.16□□□□□ -2.22
ZCCHC3Q9NUD5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.16□□□□□ -2.22
ZCCHC3Q9NUD5 AC113139.1-201ENST00000605049 239 ntBASIC1.16□□□□□ -2.22
ZCCHC3Q9NUD5 RNU6-961P-201ENST00000363893 105 ntBASIC1.15□□□□□ -2.23
ZCCHC3Q9NUD5 SNORD115-30-201ENST00000364117 82 ntBASIC1.15□□□□□ -2.23
ZCCHC3Q9NUD5 AC138393.2-201ENST00000414742 246 ntBASIC1.15□□□□□ -2.23
ZCCHC3Q9NUD5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.15□□□□□ -2.23
ZCCHC3Q9NUD5 AC098614.3-201ENST00000438957 440 ntBASIC1.15□□□□□ -2.23
ZCCHC3Q9NUD5 RBMX2P4-201ENST00000441256 376 ntBASIC1.15□□□□□ -2.23
ZCCHC3Q9NUD5 DYNLT3P2-201ENST00000442517 295 ntBASIC1.15□□□□□ -2.23
ZCCHC3Q9NUD5 RNU6-470P-201ENST00000515954 104 ntBASIC1.15□□□□□ -2.23
ZCCHC3Q9NUD5 RNU6-1096P-201ENST00000517089 102 ntBASIC1.15□□□□□ -2.23
ZCCHC3Q9NUD5 AC023442.1-201ENST00000531247 422 ntBASIC1.15□□□□□ -2.23
ZCCHC3Q9NUD5 AC090049.2-201ENST00000550377 109 ntBASIC1.15□□□□□ -2.23
ZCCHC3Q9NUD5 AC055872.1-201ENST00000570978 278 ntBASIC1.15□□□□□ -2.23
ZCCHC3Q9NUD5 GHRLOS.1-201ENST00000610995 70 ntBASIC1.15□□□□□ -2.23
ZCCHC3Q9NUD5 AL355073.2-201ENST00000612106 557 ntBASIC1.15□□□□□ -2.23
ZCCHC3Q9NUD5 AC004467.1-201ENST00000615678 330 ntBASIC1.15□□□□□ -2.23
ZCCHC3Q9NUD5 AC099654.14-201ENST00000638599 341 ntBASIC1.15□□□□□ -2.23
ZCCHC3Q9NUD5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
ZCCHC3Q9NUD5 MIRLET7C-201ENST00000362160 84 ntBASIC1.14□□□□□ -2.23
ZCCHC3Q9NUD5 SNORA7.1-201ENST00000363750 139 ntBASIC1.14□□□□□ -2.23
ZCCHC3Q9NUD5 RNY3P4-201ENST00000384428 101 ntBASIC1.14□□□□□ -2.23
ZCCHC3Q9NUD5 SNORD41-201ENST00000386967 70 ntBASIC1.14□□□□□ -2.23
ZCCHC3Q9NUD5 RNU6-1304P-201ENST00000411374 106 ntBASIC1.14□□□□□ -2.23
ZCCHC3Q9NUD5 AC108667.1-201ENST00000428618 249 ntBASIC1.14□□□□□ -2.23
ZCCHC3Q9NUD5 MTCO3P10-201ENST00000455912 772 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms