Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 RN7SKP88-201ENST00000516847 250 ntBASIC0.97□□□□□ -2.25
CCL28Q9NRJ3 RNU7-4P-201ENST00000516961 62 ntBASIC0.97□□□□□ -2.25
CCL28Q9NRJ3 AC091178.2-201ENST00000584401 117 ntBASIC0.97□□□□□ -2.25
CCL28Q9NRJ3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
CCL28Q9NRJ3 AC113139.1-201ENST00000605049 239 ntBASIC0.97□□□□□ -2.25
CCL28Q9NRJ3 7SK.8-201ENST00000612110 250 ntBASIC0.97□□□□□ -2.25
CCL28Q9NRJ3 7SK.11-201ENST00000615477 250 ntBASIC0.97□□□□□ -2.25
CCL28Q9NRJ3 7SK.13-201ENST00000622040 250 ntBASIC0.97□□□□□ -2.25
CCL28Q9NRJ3 SNORD114-7-201ENST00000362520 77 ntBASIC0.96□□□□□ -2.26
CCL28Q9NRJ3 Y_RNA.124-201ENST00000363339 93 ntBASIC0.96□□□□□ -2.26
CCL28Q9NRJ3 Y_RNA.243-201ENST00000364481 109 ntBASIC0.96□□□□□ -2.26
CCL28Q9NRJ3 RNU4-76P-201ENST00000364509 141 ntBASIC0.96□□□□□ -2.26
CCL28Q9NRJ3 Y_RNA.265-201ENST00000364677 108 ntBASIC0.96□□□□□ -2.26
CCL28Q9NRJ3 RNU6-117P-201ENST00000365415 107 ntBASIC0.96□□□□□ -2.26
CCL28Q9NRJ3 AC138393.2-201ENST00000414742 246 ntBASIC0.96□□□□□ -2.26
CCL28Q9NRJ3 AL591704.2-201ENST00000421658 181 ntBASIC0.96□□□□□ -2.26
CCL28Q9NRJ3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.96□□□□□ -2.26
CCL28Q9NRJ3 RNU6-559P-201ENST00000516151 98 ntBASIC0.96□□□□□ -2.26
CCL28Q9NRJ3 RNU7-28P-201ENST00000516759 62 ntBASIC0.96□□□□□ -2.26
CCL28Q9NRJ3 AP002004.2-201ENST00000531656 154 ntBASIC0.96□□□□□ -2.26
CCL28Q9NRJ3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.96□□□□□ -2.26
CCL28Q9NRJ3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.96□□□□□ -2.26
CCL28Q9NRJ3 MIR4421-201ENST00000578133 69 ntBASIC0.96□□□□□ -2.26
CCL28Q9NRJ3 AL355073.2-201ENST00000612106 557 ntBASIC0.96□□□□□ -2.26
CCL28Q9NRJ3 MIR8065-201ENST00000620577 100 ntBASIC0.96□□□□□ -2.26
CCL28Q9NRJ3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.96□□□□□ -2.26
CCL28Q9NRJ3 AC127459.3-201ENST00000624328 466 ntBASIC0.96□□□□□ -2.26
CCL28Q9NRJ3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CCL28Q9NRJ3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 SNORA1B-201ENST00000362535 133 ntBASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 Y_RNA.267-201ENST00000364679 109 ntBASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 Y_RNA.361-201ENST00000365515 120 ntBASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 RNU6-424P-201ENST00000384367 105 ntBASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 RNU6-1297P-201ENST00000384415 104 ntBASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 MIR520G-201ENST00000385064 90 ntBASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 CALM2P4-201ENST00000430810 426 ntBASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 Y_RNA.653-201ENST00000459091 95 ntBASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 OR9P1P-201ENST00000496431 281 ntBASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 AC105758.1-201ENST00000506038 399 ntBASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 RNU6-408P-201ENST00000515910 100 ntBASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 RNU6-470P-201ENST00000515954 104 ntBASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 AC144568.1-201ENST00000520139 137 ntBASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 AC023442.1-201ENST00000531247 422 ntBASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 AC019288.1-201ENST00000557918 224 ntBASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 MIR4778-201ENST00000577635 80 ntBASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 AC025253.1-201ENST00000613623 543 ntBASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 AC133104.2-201ENST00000615272 193 ntBASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CCL28Q9NRJ3 RNA5SP327-201ENST00000362494 101 ntBASIC0.94□□□□□ -2.26
CCL28Q9NRJ3 MIR1261-201ENST00000408659 82 ntBASIC0.94□□□□□ -2.26
CCL28Q9NRJ3 RNU5A-5P-201ENST00000411054 116 ntBASIC0.94□□□□□ -2.26
CCL28Q9NRJ3 RNU6-1304P-201ENST00000411374 106 ntBASIC0.94□□□□□ -2.26
CCL28Q9NRJ3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.94□□□□□ -2.26
CCL28Q9NRJ3 FCF1P4-201ENST00000448326 183 ntBASIC0.94□□□□□ -2.26
CCL28Q9NRJ3 MTCO3P10-201ENST00000455912 772 ntBASIC0.94□□□□□ -2.26
CCL28Q9NRJ3 RPL30P15-201ENST00000457129 321 ntBASIC0.94□□□□□ -2.26
CCL28Q9NRJ3 RN7SL429P-201ENST00000479090 223 ntBASIC0.94□□□□□ -2.26
CCL28Q9NRJ3 RN7SL489P-201ENST00000486185 223 ntBASIC0.94□□□□□ -2.26
CCL28Q9NRJ3 RN7SL327P-201ENST00000488659 223 ntBASIC0.94□□□□□ -2.26
CCL28Q9NRJ3 RNU6-1291P-201ENST00000516591 104 ntBASIC0.94□□□□□ -2.26
CCL28Q9NRJ3 RNA5SP168-201ENST00000516642 112 ntBASIC0.94□□□□□ -2.26
CCL28Q9NRJ3 RNU6-165P-201ENST00000517170 99 ntBASIC0.94□□□□□ -2.26
CCL28Q9NRJ3 RNU2-12P-201ENST00000517216 168 ntBASIC0.94□□□□□ -2.26
CCL28Q9NRJ3 AL513534.2-201ENST00000603836 250 ntBASIC0.94□□□□□ -2.26
CCL28Q9NRJ3 RN7SL853P-201ENST00000617250 223 ntBASIC0.94□□□□□ -2.26
CCL28Q9NRJ3 AC106754.2-201ENST00000623006 233 ntBASIC0.94□□□□□ -2.26
CCL28Q9NRJ3 RNU6-199P-201ENST00000362954 107 ntBASIC0.93□□□□□ -2.26
CCL28Q9NRJ3 SNORD115-30-201ENST00000364117 82 ntBASIC0.93□□□□□ -2.26
CCL28Q9NRJ3 Y_RNA.390-201ENST00000383932 102 ntBASIC0.93□□□□□ -2.26
CCL28Q9NRJ3 RNY3P4-201ENST00000384428 101 ntBASIC0.93□□□□□ -2.26
CCL28Q9NRJ3 RNA5SP482-201ENST00000391269 118 ntBASIC0.93□□□□□ -2.26
CCL28Q9NRJ3 U8.16-201ENST00000391279 133 ntBASIC0.93□□□□□ -2.26
CCL28Q9NRJ3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.93□□□□□ -2.26
CCL28Q9NRJ3 AC093852.1-201ENST00000503587 266 ntBASIC0.93□□□□□ -2.26
CCL28Q9NRJ3 RNU6-922P-201ENST00000516753 99 ntBASIC0.93□□□□□ -2.26
CCL28Q9NRJ3 AL358944.1-201ENST00000528537 144 ntBASIC0.93□□□□□ -2.26
CCL28Q9NRJ3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.93□□□□□ -2.26
CCL28Q9NRJ3 AL512598.1-201ENST00000610158 273 ntBASIC0.93□□□□□ -2.26
CCL28Q9NRJ3 AC004467.1-201ENST00000615678 330 ntBASIC0.93□□□□□ -2.26
CCL28Q9NRJ3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
CCL28Q9NRJ3 SNORA7.1-201ENST00000363750 139 ntBASIC0.92□□□□□ -2.26
CCL28Q9NRJ3 RNU6-961P-201ENST00000363893 105 ntBASIC0.92□□□□□ -2.26
CCL28Q9NRJ3 RNU6-1283P-201ENST00000365314 105 ntBASIC0.92□□□□□ -2.26
CCL28Q9NRJ3 RNU6-926P-201ENST00000384075 107 ntBASIC0.92□□□□□ -2.26
CCL28Q9NRJ3 MIR653-201ENST00000385279 96 ntBASIC0.92□□□□□ -2.26
CCL28Q9NRJ3 SNORD78.2-201ENST00000391076 69 ntBASIC0.92□□□□□ -2.26
CCL28Q9NRJ3 SNORA17.3-201ENST00000391159 129 ntBASIC0.92□□□□□ -2.26
CCL28Q9NRJ3 RNU4-62P-201ENST00000410125 130 ntBASIC0.92□□□□□ -2.26
CCL28Q9NRJ3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.92□□□□□ -2.26
CCL28Q9NRJ3 MRPS18CP6-201ENST00000423587 223 ntBASIC0.92□□□□□ -2.26
CCL28Q9NRJ3 RNU6-1096P-201ENST00000517089 102 ntBASIC0.92□□□□□ -2.26
CCL28Q9NRJ3 AC055872.1-201ENST00000570978 278 ntBASIC0.92□□□□□ -2.26
CCL28Q9NRJ3 AC068647.2-201ENST00000637380 353 ntBASIC0.92□□□□□ -2.26
CCL28Q9NRJ3 AC005592.1-201ENST00000566527 1640 ntBASIC0.92□□□□□ -2.26
CCL28Q9NRJ3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
CCL28Q9NRJ3 Y_RNA.142-201ENST00000363491 102 ntBASIC0.91□□□□□ -2.26
CCL28Q9NRJ3 Y_RNA.259-201ENST00000364619 101 ntBASIC0.91□□□□□ -2.26
CCL28Q9NRJ3 SNORA25.8-201ENST00000364831 128 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms