Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.19□□□□□ -2.22
RPAP3Q9H6T3 STAG3L5P-204ENST00000443759 179 ntBASIC1.19□□□□□ -2.22
RPAP3Q9H6T3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.19□□□□□ -2.22
RPAP3Q9H6T3 UQCRBP2-201ENST00000447827 297 ntBASIC1.19□□□□□ -2.22
RPAP3Q9H6T3 AC107399.1-201ENST00000451226 265 ntBASIC1.19□□□□□ -2.22
RPAP3Q9H6T3 RNU7-94P-201ENST00000459576 63 ntBASIC1.19□□□□□ -2.22
RPAP3Q9H6T3 AC010598.1-201ENST00000510378 103 ntBASIC1.19□□□□□ -2.22
RPAP3Q9H6T3 RNU6-358P-201ENST00000516564 75 ntBASIC1.19□□□□□ -2.22
RPAP3Q9H6T3 Y_RNA.708-201ENST00000516950 96 ntBASIC1.19□□□□□ -2.22
RPAP3Q9H6T3 MIR4778-201ENST00000577635 80 ntBASIC1.19□□□□□ -2.22
RPAP3Q9H6T3 AC060780.3-201ENST00000589464 80 ntBASIC1.19□□□□□ -2.22
RPAP3Q9H6T3 RNY1-201ENST00000364228 113 ntBASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 RNU6-407P-201ENST00000365280 104 ntBASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 AL034345.1-201ENST00000407768 123 ntBASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 MTCYBP10-201ENST00000424905 650 ntBASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 AC092423.1-201ENST00000430165 186 ntBASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 PGBD4P5-201ENST00000445958 426 ntBASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 RNU6-120P-201ENST00000516077 103 ntBASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 RN7SKP88-201ENST00000516847 250 ntBASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 AC022868.1-201ENST00000517767 391 ntBASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 AC011712.1-201ENST00000588959 234 ntBASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 AL050343.2-201ENST00000607338 280 ntBASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 7SK.8-201ENST00000612110 250 ntBASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 MIR1244-1-201ENST00000612829 85 ntBASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 7SK.11-201ENST00000615477 250 ntBASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 AC012676.2-201ENST00000619258 186 ntBASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 7SK.13-201ENST00000622040 250 ntBASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 SNORD3E-202ENST00000627253 216 ntBASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 MIR1244-3-201ENST00000635744 85 ntBASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 MIR1244-2-201ENST00000636449 85 ntBASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 MIR1244-4-202ENST00000636813 85 ntBASIC1.18□□□□□ -2.22
RPAP3Q9H6T3 MIR373-201ENST00000362273 69 ntBASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 RNU4-38P-201ENST00000364472 129 ntBASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 Y_RNA.354-201ENST00000365448 111 ntBASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 RNU6-1145P-201ENST00000384246 107 ntBASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 RNU6-136P-201ENST00000384663 107 ntBASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 RNU6-1304P-201ENST00000411374 106 ntBASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 RPL23AP50-201ENST00000434149 455 ntBASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 RPS4XP11-201ENST00000446897 772 ntBASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 MTND4P17-201ENST00000470444 350 ntBASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 AC092991.1-201ENST00000477176 376 ntBASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 SCARNA16.2-201ENST00000516520 172 ntBASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 RNU7-30P-201ENST00000516835 62 ntBASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 RNU6-1223P-201ENST00000517124 104 ntBASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 CYCSP23-201ENST00000519781 313 ntBASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 MIR3664-201ENST00000579074 99 ntBASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 MIR8065-201ENST00000620577 100 ntBASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 AC139792.2-201ENST00000624218 587 ntBASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 AC099654.5-201ENST00000636479 350 ntBASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
RPAP3Q9H6T3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
RPAP3Q9H6T3 Y_RNA.88-201ENST00000363029 99 ntBASIC1.16□□□□□ -2.22
RPAP3Q9H6T3 Y_RNA.267-201ENST00000364679 109 ntBASIC1.16□□□□□ -2.22
RPAP3Q9H6T3 RNU6-1264P-201ENST00000383891 107 ntBASIC1.16□□□□□ -2.22
RPAP3Q9H6T3 Y_RNA.482-201ENST00000384377 111 ntBASIC1.16□□□□□ -2.22
RPAP3Q9H6T3 MTCO3P19-201ENST00000415864 321 ntBASIC1.16□□□□□ -2.22
RPAP3Q9H6T3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.16□□□□□ -2.22
RPAP3Q9H6T3 AC097462.1-201ENST00000514125 324 ntBASIC1.16□□□□□ -2.22
RPAP3Q9H6T3 RNU6-922P-201ENST00000516753 99 ntBASIC1.16□□□□□ -2.22
RPAP3Q9H6T3 RNU7-172P-201ENST00000517125 64 ntBASIC1.16□□□□□ -2.22
RPAP3Q9H6T3 AP002001.1-203ENST00000534002 267 ntBASIC1.16□□□□□ -2.22
RPAP3Q9H6T3 AC104260.1-201ENST00000616660 539 ntBASIC1.16□□□□□ -2.22
RPAP3Q9H6T3 AL513423.1-201ENST00000621695 132 ntBASIC1.16□□□□□ -2.22
RPAP3Q9H6T3 MIR6079-201ENST00000635807 62 ntBASIC1.16□□□□□ -2.22
RPAP3Q9H6T3 AC073544.1-201ENST00000600110 1595 ntBASIC1.16□□□□□ -2.22
RPAP3Q9H6T3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
RPAP3Q9H6T3 Y_RNA.72-201ENST00000362894 103 ntBASIC1.15□□□□□ -2.23
RPAP3Q9H6T3 SNORA22-201ENST00000383907 134 ntBASIC1.15□□□□□ -2.23
RPAP3Q9H6T3 Y_RNA.498-201ENST00000384460 102 ntBASIC1.15□□□□□ -2.23
RPAP3Q9H6T3 SNORA22C-201ENST00000384614 134 ntBASIC1.15□□□□□ -2.23
RPAP3Q9H6T3 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
RPAP3Q9H6T3 RNU4-14P-201ENST00000410858 122 ntBASIC1.15□□□□□ -2.23
RPAP3Q9H6T3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.15□□□□□ -2.23
RPAP3Q9H6T3 CALM2P4-201ENST00000430810 426 ntBASIC1.15□□□□□ -2.23
RPAP3Q9H6T3 PCNPP5-201ENST00000452246 481 ntBASIC1.15□□□□□ -2.23
RPAP3Q9H6T3 AC093850.1-201ENST00000454121 251 ntBASIC1.15□□□□□ -2.23
RPAP3Q9H6T3 RPL39P38-201ENST00000467018 153 ntBASIC1.15□□□□□ -2.23
RPAP3Q9H6T3 AC091021.1-201ENST00000468051 388 ntBASIC1.15□□□□□ -2.23
RPAP3Q9H6T3 RNA5SP404-201ENST00000517118 132 ntBASIC1.15□□□□□ -2.23
RPAP3Q9H6T3 AL162424.1-201ENST00000602325 221 ntBASIC1.15□□□□□ -2.23
RPAP3Q9H6T3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.15□□□□□ -2.23
RPAP3Q9H6T3 PISRT1.1-201ENST00000616930 107 ntBASIC1.15□□□□□ -2.23
RPAP3Q9H6T3 RNU6-318P-201ENST00000384283 103 ntBASIC1.14□□□□□ -2.23
RPAP3Q9H6T3 SNORA75.4-201ENST00000391278 119 ntBASIC1.14□□□□□ -2.23
RPAP3Q9H6T3 MTCYBP4-201ENST00000401524 249 ntBASIC1.14□□□□□ -2.23
RPAP3Q9H6T3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.14□□□□□ -2.23
RPAP3Q9H6T3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.14□□□□□ -2.23
RPAP3Q9H6T3 UBE2V1P7-201ENST00000446395 340 ntBASIC1.14□□□□□ -2.23
RPAP3Q9H6T3 AC074133.1-201ENST00000515696 183 ntBASIC1.14□□□□□ -2.23
RPAP3Q9H6T3 RNA5SP20-201ENST00000515976 84 ntBASIC1.14□□□□□ -2.23
RPAP3Q9H6T3 RNU6-1291P-201ENST00000516591 104 ntBASIC1.14□□□□□ -2.23
RPAP3Q9H6T3 RNU6-165P-201ENST00000517170 99 ntBASIC1.14□□□□□ -2.23
RPAP3Q9H6T3 AC018448.1-201ENST00000552843 316 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms