Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 MIR302D-201ENST00000362275 68 ntBASIC1.37□□□□□ -2.19
RNF41Q9H4P4 Y_RNA.5-201ENST00000362334 102 ntBASIC1.37□□□□□ -2.19
RNF41Q9H4P4 RNU6-1115P-201ENST00000362490 106 ntBASIC1.37□□□□□ -2.19
RNF41Q9H4P4 RNU6-961P-201ENST00000363893 105 ntBASIC1.37□□□□□ -2.19
RNF41Q9H4P4 SNORA20B-201ENST00000384220 132 ntBASIC1.37□□□□□ -2.19
RNF41Q9H4P4 RPL21P1-201ENST00000399532 476 ntBASIC1.37□□□□□ -2.19
RNF41Q9H4P4 EBAG9P1-201ENST00000418955 543 ntBASIC1.37□□□□□ -2.19
RNF41Q9H4P4 RAB28P5-201ENST00000427490 651 ntBASIC1.37□□□□□ -2.19
RNF41Q9H4P4 MTND3P22-201ENST00000510932 243 ntBASIC1.37□□□□□ -2.19
RNF41Q9H4P4 RNU7-99P-201ENST00000516271 62 ntBASIC1.37□□□□□ -2.19
RNF41Q9H4P4 SNORA31.10-201ENST00000516482 106 ntBASIC1.37□□□□□ -2.19
RNF41Q9H4P4 RNU1-142P-201ENST00000516682 145 ntBASIC1.37□□□□□ -2.19
RNF41Q9H4P4 RNA5SP481-201ENST00000516814 122 ntBASIC1.37□□□□□ -2.19
RNF41Q9H4P4 SNORA44.1-201ENST00000517031 108 ntBASIC1.37□□□□□ -2.19
RNF41Q9H4P4 RAB11AP2-201ENST00000545905 639 ntBASIC1.37□□□□□ -2.19
RNF41Q9H4P4 AL137100.2-201ENST00000555786 315 ntBASIC1.37□□□□□ -2.19
RNF41Q9H4P4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.37□□□□□ -2.19
RNF41Q9H4P4 AL117336.2-201ENST00000602435 335 ntBASIC1.37□□□□□ -2.19
RNF41Q9H4P4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
RNF41Q9H4P4 RNU4-79P-201ENST00000362764 141 ntBASIC1.36□□□□□ -2.19
RNF41Q9H4P4 RNU4-73P-201ENST00000363164 141 ntBASIC1.36□□□□□ -2.19
RNF41Q9H4P4 RNU6-708P-201ENST00000384217 107 ntBASIC1.36□□□□□ -2.19
RNF41Q9H4P4 RNY3P4-201ENST00000384428 101 ntBASIC1.36□□□□□ -2.19
RNF41Q9H4P4 SNORA12.1-201ENST00000390873 148 ntBASIC1.36□□□□□ -2.19
RNF41Q9H4P4 RNU2-7P-201ENST00000410794 178 ntBASIC1.36□□□□□ -2.19
RNF41Q9H4P4 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.36□□□□□ -2.19
RNF41Q9H4P4 AC112492.4-201ENST00000456549 352 ntBASIC1.36□□□□□ -2.19
RNF41Q9H4P4 RNU6-625P-201ENST00000459412 107 ntBASIC1.36□□□□□ -2.19
RNF41Q9H4P4 RNU7-169P-201ENST00000459456 61 ntBASIC1.36□□□□□ -2.19
RNF41Q9H4P4 AC010469.2-201ENST00000496412 480 ntBASIC1.36□□□□□ -2.19
RNF41Q9H4P4 RNU6-1012P-201ENST00000516606 109 ntBASIC1.36□□□□□ -2.19
RNF41Q9H4P4 AC144568.1-201ENST00000520139 137 ntBASIC1.36□□□□□ -2.19
RNF41Q9H4P4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.36□□□□□ -2.19
RNF41Q9H4P4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
RNF41Q9H4P4 MIR4795-201ENST00000584182 89 ntBASIC1.36□□□□□ -2.19
RNF41Q9H4P4 AC133104.2-201ENST00000615272 193 ntBASIC1.36□□□□□ -2.19
RNF41Q9H4P4 AC104985.2-201ENST00000620598 500 ntBASIC1.36□□□□□ -2.19
RNF41Q9H4P4 MIR3674-201ENST00000636576 68 ntBASIC1.36□□□□□ -2.19
RNF41Q9H4P4 AC091812.1-201ENST00000432235 1948 ntBASIC1.36□□□□□ -2.19
RNF41Q9H4P4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
RNF41Q9H4P4 RNY1P10-201ENST00000363268 113 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 Y_RNA.243-201ENST00000364481 109 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 Y_RNA.315-201ENST00000365117 102 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 Y_RNA.361-201ENST00000365515 120 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
RNF41Q9H4P4 RNU6-1186P-201ENST00000410429 97 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.35□□□□□ -2.19
RNF41Q9H4P4 MTCO2P27-201ENST00000420740 428 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 AL591704.2-201ENST00000421658 181 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 AC096644.2-201ENST00000429278 159 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.35□□□□□ -2.19
RNF41Q9H4P4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.35□□□□□ -2.19
RNF41Q9H4P4 AC099799.1-201ENST00000439809 192 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 MRPS10P1-201ENST00000448483 130 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 snoU13.27-201ENST00000459278 104 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 AC099513.1-201ENST00000490423 301 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.35□□□□□ -2.19
RNF41Q9H4P4 AC093852.1-201ENST00000503587 266 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.35□□□□□ -2.19
RNF41Q9H4P4 HMGN1P13-201ENST00000505795 138 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 RNU6-408P-201ENST00000515910 100 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 RNU6-911P-201ENST00000516523 104 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 AC027419.1-201ENST00000522976 328 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 AC023157.2-201ENST00000540596 141 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 AL160236.1-201ENST00000556317 195 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 MIR4438-201ENST00000585271 93 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 AL390123.1-201ENST00000603216 237 ntBASIC1.35□□□□□ -2.19
RNF41Q9H4P4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.34□□□□□ -2.19
RNF41Q9H4P4 SNORA27.1-201ENST00000362604 124 ntBASIC1.34□□□□□ -2.19
RNF41Q9H4P4 RNU6-1266P-201ENST00000362794 105 ntBASIC1.34□□□□□ -2.19
RNF41Q9H4P4 RNU1-22P-201ENST00000363334 158 ntBASIC1.34□□□□□ -2.19
RNF41Q9H4P4 Y_RNA.314-201ENST00000365114 102 ntBASIC1.34□□□□□ -2.19
RNF41Q9H4P4 RNA5SP323-201ENST00000391094 133 ntBASIC1.34□□□□□ -2.19
RNF41Q9H4P4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.34□□□□□ -2.19
RNF41Q9H4P4 RN7SKP179-201ENST00000516126 217 ntBASIC1.34□□□□□ -2.19
RNF41Q9H4P4 MIR3684-201ENST00000579779 74 ntBASIC1.34□□□□□ -2.19
RNF41Q9H4P4 Y_RNA.804-201ENST00000615262 101 ntBASIC1.34□□□□□ -2.19
RNF41Q9H4P4 U2.1-201ENST00000618978 145 ntBASIC1.34□□□□□ -2.19
RNF41Q9H4P4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
RNF41Q9H4P4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
RNF41Q9H4P4 Y_RNA.146-201ENST00000363549 102 ntBASIC1.33□□□□□ -2.2
RNF41Q9H4P4 RNU6-414P-201ENST00000363705 104 ntBASIC1.33□□□□□ -2.2
RNF41Q9H4P4 RNU6-271P-201ENST00000363858 105 ntBASIC1.33□□□□□ -2.2
RNF41Q9H4P4 Y_RNA.252-201ENST00000364556 101 ntBASIC1.33□□□□□ -2.2
RNF41Q9H4P4 RNU6-53P-201ENST00000365367 106 ntBASIC1.33□□□□□ -2.2
RNF41Q9H4P4 RNU1-78P-201ENST00000391248 165 ntBASIC1.33□□□□□ -2.2
RNF41Q9H4P4 Y_RNA.605-201ENST00000410577 105 ntBASIC1.33□□□□□ -2.2
RNF41Q9H4P4 MTND4LP11-201ENST00000422184 280 ntBASIC1.33□□□□□ -2.2
RNF41Q9H4P4 AC018865.2-201ENST00000423631 129 ntBASIC1.33□□□□□ -2.2
RNF41Q9H4P4 RPS27P22-201ENST00000478056 241 ntBASIC1.33□□□□□ -2.2
RNF41Q9H4P4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.33□□□□□ -2.2
RNF41Q9H4P4 RNU2-12P-201ENST00000517216 168 ntBASIC1.33□□□□□ -2.2
RNF41Q9H4P4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.33□□□□□ -2.2
RNF41Q9H4P4 AC015688.6-201ENST00000577737 104 ntBASIC1.33□□□□□ -2.2
RNF41Q9H4P4 AC004467.1-201ENST00000615678 330 ntBASIC1.33□□□□□ -2.2
RNF41Q9H4P4 MIR8054-201ENST00000620877 86 ntBASIC1.33□□□□□ -2.2
RNF41Q9H4P4 MIR4272-201ENST00000635924 64 ntBASIC1.33□□□□□ -2.2
RNF41Q9H4P4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
RNF41Q9H4P4 Y_RNA.101-201ENST00000363154 102 ntBASIC1.32□□□□□ -2.2
RNF41Q9H4P4 RNU6-117P-201ENST00000365415 107 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms