Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 RNU1-139P-201ENST00000391307 165 ntBASIC0.17□□□□□ -2.38
VCX3BQ9H321 MIR873-201ENST00000401120 77 ntBASIC0.17□□□□□ -2.38
VCX3BQ9H321 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.17□□□□□ -2.38
VCX3BQ9H321 MIR1298-201ENST00000408783 112 ntBASIC0.17□□□□□ -2.38
VCX3BQ9H321 MIR1302-7-201ENST00000408841 72 ntBASIC0.17□□□□□ -2.38
VCX3BQ9H321 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.17□□□□□ -2.38
VCX3BQ9H321 RN7SKP298-201ENST00000515950 94 ntBASIC0.17□□□□□ -2.38
VCX3BQ9H321 RNU11-2P-201ENST00000516898 142 ntBASIC0.17□□□□□ -2.38
VCX3BQ9H321 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
VCX3BQ9H321 MIR5696-201ENST00000578474 85 ntBASIC0.17□□□□□ -2.38
VCX3BQ9H321 MIR3908-201ENST00000579798 126 ntBASIC0.17□□□□□ -2.38
VCX3BQ9H321 AC104984.5-201ENST00000586878 94 ntBASIC0.17□□□□□ -2.38
VCX3BQ9H321 AC136443.5-201ENST00000603741 370 ntBASIC0.17□□□□□ -2.38
VCX3BQ9H321 RNU6-89P-201ENST00000606519 100 ntBASIC0.17□□□□□ -2.38
VCX3BQ9H321 AC073114.1-201ENST00000612027 490 ntBASIC0.17□□□□□ -2.38
VCX3BQ9H321 AC243829.6-201ENST00000612652 106 ntBASIC0.17□□□□□ -2.38
VCX3BQ9H321 Z69908.1-201ENST00000622603 247 ntBASIC0.17□□□□□ -2.38
VCX3BQ9H321 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.16□□□□□ -2.38
VCX3BQ9H321 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
VCX3BQ9H321 SNORD68-201ENST00000363214 84 ntBASIC0.16□□□□□ -2.38
VCX3BQ9H321 RNA5SP95-201ENST00000410319 137 ntBASIC0.16□□□□□ -2.38
VCX3BQ9H321 RNU6-1001P-201ENST00000411265 100 ntBASIC0.16□□□□□ -2.38
VCX3BQ9H321 RNU6-1304P-201ENST00000411374 106 ntBASIC0.16□□□□□ -2.38
VCX3BQ9H321 AC092447.3-201ENST00000426027 686 ntBASIC0.16□□□□□ -2.38
VCX3BQ9H321 AC098934.3-201ENST00000430450 190 ntBASIC0.16□□□□□ -2.38
VCX3BQ9H321 MTND3P23-201ENST00000431980 347 ntBASIC0.16□□□□□ -2.38
VCX3BQ9H321 ERLEC1P1-201ENST00000433806 578 ntBASIC0.16□□□□□ -2.38
VCX3BQ9H321 NDUFA5P4-201ENST00000436704 385 ntBASIC0.16□□□□□ -2.38
VCX3BQ9H321 Y_RNA.665-201ENST00000516177 98 ntBASIC0.16□□□□□ -2.38
VCX3BQ9H321 RNU7-43P-201ENST00000516554 64 ntBASIC0.16□□□□□ -2.38
VCX3BQ9H321 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.16□□□□□ -2.38
VCX3BQ9H321 AC093023.1-201ENST00000547375 507 ntBASIC0.16□□□□□ -2.38
VCX3BQ9H321 MIR4764-201ENST00000580680 88 ntBASIC0.16□□□□□ -2.38
VCX3BQ9H321 AC005828.6-201ENST00000606610 232 ntBASIC0.16□□□□□ -2.38
VCX3BQ9H321 AL357075.2-201ENST00000614906 189 ntBASIC0.16□□□□□ -2.38
VCX3BQ9H321 AC243829.3-201ENST00000622177 108 ntBASIC0.16□□□□□ -2.38
VCX3BQ9H321 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.16□□□□□ -2.38
VCX3BQ9H321 AC127459.3-201ENST00000624328 466 ntBASIC0.16□□□□□ -2.38
VCX3BQ9H321 AL442644.1-201ENST00000454390 3105 ntBASIC0.16□□□□□ -2.38
VCX3BQ9H321 SNORD113.3-201ENST00000364630 78 ntBASIC0.15□□□□□ -2.39
VCX3BQ9H321 Y_RNA.409-201ENST00000383990 98 ntBASIC0.15□□□□□ -2.39
VCX3BQ9H321 RNU6-281P-201ENST00000384212 103 ntBASIC0.15□□□□□ -2.39
VCX3BQ9H321 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.15□□□□□ -2.39
VCX3BQ9H321 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.15□□□□□ -2.39
VCX3BQ9H321 USP9YP16-201ENST00000430287 407 ntBASIC0.15□□□□□ -2.39
VCX3BQ9H321 MTATP6P13-201ENST00000438531 667 ntBASIC0.15□□□□□ -2.39
VCX3BQ9H321 AL392103.1-201ENST00000447000 198 ntBASIC0.15□□□□□ -2.39
VCX3BQ9H321 UQCRBP2-201ENST00000447827 297 ntBASIC0.15□□□□□ -2.39
VCX3BQ9H321 USP9YP23-201ENST00000455085 407 ntBASIC0.15□□□□□ -2.39
VCX3BQ9H321 AC108740.1-201ENST00000498629 225 ntBASIC0.15□□□□□ -2.39
VCX3BQ9H321 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.15□□□□□ -2.39
VCX3BQ9H321 RNU7-175P-201ENST00000515915 61 ntBASIC0.15□□□□□ -2.39
VCX3BQ9H321 RNU6-63P-201ENST00000516690 95 ntBASIC0.15□□□□□ -2.39
VCX3BQ9H321 MIR4762-201ENST00000585261 75 ntBASIC0.15□□□□□ -2.39
VCX3BQ9H321 AC125232.2-201ENST00000592457 143 ntBASIC0.15□□□□□ -2.39
VCX3BQ9H321 MIR6715A-201ENST00000615929 79 ntBASIC0.15□□□□□ -2.39
VCX3BQ9H321 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.14□□□□□ -2.39
VCX3BQ9H321 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 RNU6-369P-201ENST00000362515 102 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 RNU6-1252P-201ENST00000363054 104 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 Y_RNA.135-201ENST00000363439 95 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 RNU6-1327P-201ENST00000365302 105 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 AC117470.1-201ENST00000381974 330 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 MIR573-201ENST00000384964 99 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 MIR216A-201ENST00000385063 110 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 MIR136-201ENST00000385207 82 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 ELOCP21-201ENST00000412558 336 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 MTND1P4-201ENST00000435196 415 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 RNU6-956P-201ENST00000458868 103 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 RNU7-66P-201ENST00000459469 62 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 RNU6-1053P-201ENST00000515930 101 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 SNORA18.7-201ENST00000516910 131 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.14□□□□□ -2.39
VCX3BQ9H321 AL512605.2-201ENST00000592972 256 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 AC124303.1-201ENST00000605703 360 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 AL138726.1-201ENST00000614873 333 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 AL591926.4-201ENST00000616895 298 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 U6.115-201ENST00000636045 103 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 AC068137.3-201ENST00000639191 341 ntBASIC0.14□□□□□ -2.39
VCX3BQ9H321 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
VCX3BQ9H321 MIR103A1-201ENST00000362165 78 ntBASIC0.13□□□□□ -2.39
VCX3BQ9H321 Y_RNA.405-201ENST00000383979 100 ntBASIC0.13□□□□□ -2.39
VCX3BQ9H321 Y_RNA.451-201ENST00000384200 100 ntBASIC0.13□□□□□ -2.39
VCX3BQ9H321 Y_RNA.481-201ENST00000384373 102 ntBASIC0.13□□□□□ -2.39
VCX3BQ9H321 Y_RNA.524-201ENST00000384564 100 ntBASIC0.13□□□□□ -2.39
VCX3BQ9H321 Y_RNA.533-201ENST00000384596 114 ntBASIC0.13□□□□□ -2.39
VCX3BQ9H321 RNU6-136P-201ENST00000384663 107 ntBASIC0.13□□□□□ -2.39
VCX3BQ9H321 Y_RNA.561-201ENST00000384694 100 ntBASIC0.13□□□□□ -2.39
VCX3BQ9H321 RNU6-1105P-201ENST00000384774 107 ntBASIC0.13□□□□□ -2.39
VCX3BQ9H321 Y_RNA.582-201ENST00000391023 95 ntBASIC0.13□□□□□ -2.39
VCX3BQ9H321 USMG5P1-201ENST00000425964 177 ntBASIC0.13□□□□□ -2.39
VCX3BQ9H321 MTCO3P10-201ENST00000455912 772 ntBASIC0.13□□□□□ -2.39
VCX3BQ9H321 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.13□□□□□ -2.39
VCX3BQ9H321 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.13□□□□□ -2.39
VCX3BQ9H321 ZNF519P2-201ENST00000557032 169 ntBASIC0.13□□□□□ -2.39
VCX3BQ9H321 MIR4431-201ENST00000579990 94 ntBASIC0.13□□□□□ -2.39
VCX3BQ9H321 MIR4300-201ENST00000581016 96 ntBASIC0.13□□□□□ -2.39
VCX3BQ9H321 AF250324.2-201ENST00000608299 610 ntBASIC0.13□□□□□ -2.39
VCX3BQ9H321 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms