Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC113Q9H0I3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.83-201ENST00000363005 113 ntBASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 RNU1-22P-201ENST00000363334 158 ntBASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 RNU6-899P-201ENST00000363947 107 ntBASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 RNY1-201ENST00000364228 113 ntBASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 SNORA72.4-201ENST00000384174 132 ntBASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 BX510359.4-201ENST00000423750 193 ntBASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 U8.19-201ENST00000459095 133 ntBASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.637-201ENST00000459424 114 ntBASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 AC097462.1-201ENST00000514125 324 ntBASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 SNORD116-28-201ENST00000516123 91 ntBASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 RNU1-142P-201ENST00000516682 145 ntBASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 MIR3169-201ENST00000578032 83 ntBASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 AC005972.2-201ENST00000604690 348 ntBASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 AL359075.3-201ENST00000613288 217 ntBASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 MIR6817-201ENST00000615588 66 ntBASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 AC007336.1-201ENST00000576365 3828 ntBASIC2.85□□□□□ -1.95
CCDC113Q9H0I3 RNU6-862P-201ENST00000362804 105 ntBASIC2.84□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.172-201ENST00000363765 102 ntBASIC2.84□□□□□ -1.95
CCDC113Q9H0I3 RNA5SP68-201ENST00000363885 119 ntBASIC2.84□□□□□ -1.95
CCDC113Q9H0I3 RNU6-1048P-201ENST00000364054 107 ntBASIC2.84□□□□□ -1.95
CCDC113Q9H0I3 RNU6-200P-201ENST00000364743 107 ntBASIC2.84□□□□□ -1.95
CCDC113Q9H0I3 SNORD116-13-201ENST00000384408 92 ntBASIC2.84□□□□□ -1.95
CCDC113Q9H0I3 SNORA26.5-201ENST00000391215 123 ntBASIC2.84□□□□□ -1.95
CCDC113Q9H0I3 SNORA11.4-201ENST00000408823 129 ntBASIC2.84□□□□□ -1.95
CCDC113Q9H0I3 RNU2-14P-201ENST00000411053 191 ntBASIC2.84□□□□□ -1.95
CCDC113Q9H0I3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC113Q9H0I3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC113Q9H0I3 SNORD2.1-201ENST00000458762 69 ntBASIC2.84□□□□□ -1.95
CCDC113Q9H0I3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC113Q9H0I3 AL353149.1-201ENST00000610667 244 ntBASIC2.84□□□□□ -1.95
CCDC113Q9H0I3 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.84□□□□□ -1.95
CCDC113Q9H0I3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.84□□□□□ -1.96
CCDC113Q9H0I3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
CCDC113Q9H0I3 Y_RNA.293-201ENST00000364908 93 ntBASIC2.83□□□□□ -1.96
CCDC113Q9H0I3 MIR515-2-201ENST00000384883 83 ntBASIC2.83□□□□□ -1.96
CCDC113Q9H0I3 MIR515-1-201ENST00000384884 83 ntBASIC2.83□□□□□ -1.96
CCDC113Q9H0I3 RNA5SP467-201ENST00000391274 118 ntBASIC2.83□□□□□ -1.96
CCDC113Q9H0I3 RNA5SP511-201ENST00000410487 115 ntBASIC2.83□□□□□ -1.96
CCDC113Q9H0I3 EBAG9P1-201ENST00000418955 543 ntBASIC2.83□□□□□ -1.96
CCDC113Q9H0I3 MTND5P15-201ENST00000434246 349 ntBASIC2.83□□□□□ -1.96
CCDC113Q9H0I3 AL135790.2-201ENST00000437701 267 ntBASIC2.83□□□□□ -1.96
CCDC113Q9H0I3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC113Q9H0I3 AC130289.1-201ENST00000577321 73 ntBASIC2.83□□□□□ -1.96
CCDC113Q9H0I3 MIR5692C2-201ENST00000577959 77 ntBASIC2.83□□□□□ -1.96
CCDC113Q9H0I3 AL008718.3-201ENST00000610217 321 ntBASIC2.83□□□□□ -1.96
CCDC113Q9H0I3 AC013791.1-201ENST00000616619 62 ntBASIC2.83□□□□□ -1.96
CCDC113Q9H0I3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC113Q9H0I3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC113Q9H0I3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC113Q9H0I3 RNU1-96P-201ENST00000364163 162 ntBASIC2.82□□□□□ -1.96
CCDC113Q9H0I3 RNY4P28-201ENST00000365281 93 ntBASIC2.82□□□□□ -1.96
CCDC113Q9H0I3 Y_RNA.626-201ENST00000411288 95 ntBASIC2.82□□□□□ -1.96
CCDC113Q9H0I3 AL139156.1-201ENST00000412785 841 ntBASIC2.82□□□□□ -1.96
CCDC113Q9H0I3 AC018634.1-201ENST00000437554 401 ntBASIC2.82□□□□□ -1.96
CCDC113Q9H0I3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC113Q9H0I3 RNU7-141P-201ENST00000459304 62 ntBASIC2.82□□□□□ -1.96
CCDC113Q9H0I3 COX6CP14-201ENST00000469580 174 ntBASIC2.82□□□□□ -1.96
CCDC113Q9H0I3 AC117454.1-201ENST00000491120 168 ntBASIC2.82□□□□□ -1.96
CCDC113Q9H0I3 RNA5SP320-201ENST00000516263 124 ntBASIC2.82□□□□□ -1.96
CCDC113Q9H0I3 RNU7-99P-201ENST00000516271 62 ntBASIC2.82□□□□□ -1.96
CCDC113Q9H0I3 RNA5SP148-201ENST00000516527 94 ntBASIC2.82□□□□□ -1.96
CCDC113Q9H0I3 RNU1-104P-201ENST00000517280 175 ntBASIC2.82□□□□□ -1.96
CCDC113Q9H0I3 AC004486.1-201ENST00000546846 233 ntBASIC2.82□□□□□ -1.96
CCDC113Q9H0I3 AC005786.1-201ENST00000588553 154 ntBASIC2.82□□□□□ -1.96
CCDC113Q9H0I3 SNORD14A-201ENST00000606526 91 ntBASIC2.82□□□□□ -1.96
CCDC113Q9H0I3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC113Q9H0I3 MIR449A-201ENST00000362113 91 ntBASIC2.81□□□□□ -1.96
CCDC113Q9H0I3 RNU6-1205P-201ENST00000363625 106 ntBASIC2.81□□□□□ -1.96
CCDC113Q9H0I3 Y_RNA.262-201ENST00000364641 102 ntBASIC2.81□□□□□ -1.96
CCDC113Q9H0I3 Y_RNA.297-201ENST00000364950 91 ntBASIC2.81□□□□□ -1.96
CCDC113Q9H0I3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC113Q9H0I3 CST2P1-201ENST00000425770 87 ntBASIC2.81□□□□□ -1.96
CCDC113Q9H0I3 RPL36AP21-201ENST00000490372 323 ntBASIC2.81□□□□□ -1.96
CCDC113Q9H0I3 RNU6-138P-201ENST00000515952 107 ntBASIC2.81□□□□□ -1.96
CCDC113Q9H0I3 SNORA31.15-201ENST00000516771 132 ntBASIC2.81□□□□□ -1.96
CCDC113Q9H0I3 RNU7-116P-201ENST00000516940 62 ntBASIC2.81□□□□□ -1.96
CCDC113Q9H0I3 POLR3GP1-201ENST00000594073 261 ntBASIC2.81□□□□□ -1.96
CCDC113Q9H0I3 AC004832.4-201ENST00000608952 331 ntBASIC2.81□□□□□ -1.96
CCDC113Q9H0I3 SNORA67.1-201ENST00000364749 141 ntBASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 U8.7-201ENST00000364940 136 ntBASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 RNU1-52P-201ENST00000384190 164 ntBASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 SNORA8-201ENST00000384574 139 ntBASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 SNORA67.4-201ENST00000384688 142 ntBASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 MIR518A2-201ENST00000384966 87 ntBASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 HMGN2P39-201ENST00000398005 273 ntBASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 AL135786.1-201ENST00000415892 214 ntBASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 AL162725.1-201ENST00000435405 301 ntBASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 AC104332.1-201ENST00000440471 797 ntBASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 AL138752.1-201ENST00000452964 351 ntBASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 RPL23AP94-201ENST00000512518 302 ntBASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 MIR3670-2-201ENST00000582974 65 ntBASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 MIR3670-1-201ENST00000584160 65 ntBASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 MIR3670-3-201ENST00000584855 65 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms