Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 HSPE1P13-201ENST00000451143 297 ntBASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 RPS27P22-201ENST00000478056 241 ntBASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 RNU6-322P-201ENST00000516010 103 ntBASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 Y_RNA.683-201ENST00000516508 93 ntBASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 RNU6-922P-201ENST00000516753 99 ntBASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 Y_RNA.704-201ENST00000516851 102 ntBASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 UBL5P4-201ENST00000562584 236 ntBASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 AL357312.1-201ENST00000603879 298 ntBASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 AC022079.1-201ENST00000621546 602 ntBASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 AC106754.2-201ENST00000623006 233 ntBASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 RNU1-36P-201ENST00000365130 165 ntBASIC0.75□□□□□ -2.29
PCDH11XQ9BZA7 RNU6-424P-201ENST00000384367 105 ntBASIC0.75□□□□□ -2.29
PCDH11XQ9BZA7 RNU6-910P-201ENST00000390844 107 ntBASIC0.75□□□□□ -2.29
PCDH11XQ9BZA7 RNU6-780P-201ENST00000391030 104 ntBASIC0.75□□□□□ -2.29
PCDH11XQ9BZA7 RNU6-332P-201ENST00000391193 108 ntBASIC0.75□□□□□ -2.29
PCDH11XQ9BZA7 AL451046.2-201ENST00000403074 277 ntBASIC0.75□□□□□ -2.29
PCDH11XQ9BZA7 RNU6-373P-201ENST00000411247 98 ntBASIC0.75□□□□□ -2.29
PCDH11XQ9BZA7 AC245047.7-201ENST00000440265 293 ntBASIC0.75□□□□□ -2.29
PCDH11XQ9BZA7 STAG3L5P-204ENST00000443759 179 ntBASIC0.75□□□□□ -2.29
PCDH11XQ9BZA7 AC010469.2-201ENST00000496412 480 ntBASIC0.75□□□□□ -2.29
PCDH11XQ9BZA7 AL590705.4-201ENST00000532209 134 ntBASIC0.75□□□□□ -2.29
PCDH11XQ9BZA7 RPL21P9-201ENST00000556149 474 ntBASIC0.75□□□□□ -2.29
PCDH11XQ9BZA7 MIR6079-201ENST00000635807 62 ntBASIC0.75□□□□□ -2.29
PCDH11XQ9BZA7 SNORA2.2-201ENST00000365473 135 ntBASIC0.74□□□□□ -2.29
PCDH11XQ9BZA7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.74□□□□□ -2.29
PCDH11XQ9BZA7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.74□□□□□ -2.29
PCDH11XQ9BZA7 AP000870.1-201ENST00000472927 406 ntBASIC0.74□□□□□ -2.29
PCDH11XQ9BZA7 AC048334.1-201ENST00000477975 159 ntBASIC0.74□□□□□ -2.29
PCDH11XQ9BZA7 AC097462.1-201ENST00000514125 324 ntBASIC0.74□□□□□ -2.29
PCDH11XQ9BZA7 RNU6-1114P-201ENST00000516022 107 ntBASIC0.74□□□□□ -2.29
PCDH11XQ9BZA7 RNA5SP168-201ENST00000516642 112 ntBASIC0.74□□□□□ -2.29
PCDH11XQ9BZA7 AC091144.1-201ENST00000519573 138 ntBASIC0.74□□□□□ -2.29
PCDH11XQ9BZA7 MIR4273-201ENST00000582824 84 ntBASIC0.74□□□□□ -2.29
PCDH11XQ9BZA7 ZNF299P-201ENST00000406845 1804 ntBASIC0.74□□□□□ -2.29
PCDH11XQ9BZA7 RNU6-595P-201ENST00000363944 107 ntBASIC0.73□□□□□ -2.29
PCDH11XQ9BZA7 Y_RNA.265-201ENST00000364677 108 ntBASIC0.73□□□□□ -2.29
PCDH11XQ9BZA7 RNU6-281P-201ENST00000384212 103 ntBASIC0.73□□□□□ -2.29
PCDH11XQ9BZA7 MIR200A-201ENST00000384875 90 ntBASIC0.73□□□□□ -2.29
PCDH11XQ9BZA7 SNORD41-201ENST00000386967 70 ntBASIC0.73□□□□□ -2.29
PCDH11XQ9BZA7 MTCYBP4-201ENST00000401524 249 ntBASIC0.73□□□□□ -2.29
PCDH11XQ9BZA7 AC063976.4-201ENST00000421971 163 ntBASIC0.73□□□□□ -2.29
PCDH11XQ9BZA7 AL606490.4-201ENST00000423117 127 ntBASIC0.73□□□□□ -2.29
PCDH11XQ9BZA7 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.73□□□□□ -2.29
PCDH11XQ9BZA7 HAR1A.1-201ENST00000459583 118 ntBASIC0.73□□□□□ -2.29
PCDH11XQ9BZA7 AC105313.1-201ENST00000509121 353 ntBASIC0.73□□□□□ -2.29
PCDH11XQ9BZA7 SNORD79.1-201ENST00000516069 84 ntBASIC0.73□□□□□ -2.29
PCDH11XQ9BZA7 RNU7-172P-201ENST00000517125 64 ntBASIC0.73□□□□□ -2.29
PCDH11XQ9BZA7 AC023157.2-201ENST00000540596 141 ntBASIC0.73□□□□□ -2.29
PCDH11XQ9BZA7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.73□□□□□ -2.29
PCDH11XQ9BZA7 AC106800.4-201ENST00000614905 153 ntBASIC0.73□□□□□ -2.29
PCDH11XQ9BZA7 Y_RNA.38-201ENST00000362617 102 ntBASIC0.72□□□□□ -2.29
PCDH11XQ9BZA7 SNORD114-24-201ENST00000365029 72 ntBASIC0.72□□□□□ -2.29
PCDH11XQ9BZA7 AC002429.1-201ENST00000437672 148 ntBASIC0.72□□□□□ -2.29
PCDH11XQ9BZA7 RPL39P39-201ENST00000455840 151 ntBASIC0.72□□□□□ -2.29
PCDH11XQ9BZA7 AC022493.2-201ENST00000506122 481 ntBASIC0.72□□□□□ -2.29
PCDH11XQ9BZA7 AC046134.1-201ENST00000514454 666 ntBASIC0.72□□□□□ -2.29
PCDH11XQ9BZA7 RNU6-229P-201ENST00000516614 102 ntBASIC0.72□□□□□ -2.29
PCDH11XQ9BZA7 RNU6-107P-201ENST00000516643 102 ntBASIC0.72□□□□□ -2.29
PCDH11XQ9BZA7 RNU6-341P-201ENST00000516973 96 ntBASIC0.72□□□□□ -2.29
PCDH11XQ9BZA7 MIR4778-201ENST00000577635 80 ntBASIC0.72□□□□□ -2.29
PCDH11XQ9BZA7 AC100812.1-201ENST00000607622 580 ntBASIC0.72□□□□□ -2.29
PCDH11XQ9BZA7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.72□□□□□ -2.29
PCDH11XQ9BZA7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
PCDH11XQ9BZA7 Y_RNA.405-201ENST00000383979 100 ntBASIC0.71□□□□□ -2.3
PCDH11XQ9BZA7 Y_RNA.451-201ENST00000384200 100 ntBASIC0.71□□□□□ -2.3
PCDH11XQ9BZA7 SNORA80D-201ENST00000384488 135 ntBASIC0.71□□□□□ -2.3
PCDH11XQ9BZA7 Y_RNA.524-201ENST00000384564 100 ntBASIC0.71□□□□□ -2.3
PCDH11XQ9BZA7 Y_RNA.533-201ENST00000384596 114 ntBASIC0.71□□□□□ -2.3
PCDH11XQ9BZA7 Y_RNA.561-201ENST00000384694 100 ntBASIC0.71□□□□□ -2.3
PCDH11XQ9BZA7 MIR1197-201ENST00000408818 88 ntBASIC0.71□□□□□ -2.3
PCDH11XQ9BZA7 RNU2-64P-201ENST00000411315 191 ntBASIC0.71□□□□□ -2.3
PCDH11XQ9BZA7 MTCO2P7-201ENST00000446518 666 ntBASIC0.71□□□□□ -2.3
PCDH11XQ9BZA7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.71□□□□□ -2.3
PCDH11XQ9BZA7 OR9P1P-201ENST00000496431 281 ntBASIC0.71□□□□□ -2.3
PCDH11XQ9BZA7 RNU2-56P-201ENST00000516826 190 ntBASIC0.71□□□□□ -2.3
PCDH11XQ9BZA7 Y_RNA.706-201ENST00000516933 99 ntBASIC0.71□□□□□ -2.3
PCDH11XQ9BZA7 AP002004.2-201ENST00000531656 154 ntBASIC0.71□□□□□ -2.3
PCDH11XQ9BZA7 AC024909.2-201ENST00000553035 286 ntBASIC0.71□□□□□ -2.3
PCDH11XQ9BZA7 AL121579.1-201ENST00000555129 305 ntBASIC0.71□□□□□ -2.3
PCDH11XQ9BZA7 AC090617.3-201ENST00000573670 475 ntBASIC0.71□□□□□ -2.3
PCDH11XQ9BZA7 AC091178.2-201ENST00000584401 117 ntBASIC0.71□□□□□ -2.3
PCDH11XQ9BZA7 AC009229.3-201ENST00000608056 282 ntBASIC0.71□□□□□ -2.3
PCDH11XQ9BZA7 RNU6-1264P-201ENST00000383891 107 ntBASIC0.7□□□□□ -2.3
PCDH11XQ9BZA7 SNORA20B-201ENST00000384220 132 ntBASIC0.7□□□□□ -2.3
PCDH11XQ9BZA7 RNA5SP482-201ENST00000391269 118 ntBASIC0.7□□□□□ -2.3
PCDH11XQ9BZA7 U8.16-201ENST00000391279 133 ntBASIC0.7□□□□□ -2.3
PCDH11XQ9BZA7 USP9YP16-201ENST00000430287 407 ntBASIC0.7□□□□□ -2.3
PCDH11XQ9BZA7 MTND3P23-201ENST00000431980 347 ntBASIC0.7□□□□□ -2.3
PCDH11XQ9BZA7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.7□□□□□ -2.3
PCDH11XQ9BZA7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.7□□□□□ -2.3
PCDH11XQ9BZA7 USP9YP23-201ENST00000455085 407 ntBASIC0.7□□□□□ -2.3
PCDH11XQ9BZA7 RNU6-917P-201ENST00000516294 104 ntBASIC0.7□□□□□ -2.3
PCDH11XQ9BZA7 SCARNA16.2-201ENST00000516520 172 ntBASIC0.7□□□□□ -2.3
PCDH11XQ9BZA7 RNU6-506P-201ENST00000516553 94 ntBASIC0.7□□□□□ -2.3
PCDH11XQ9BZA7 AC027419.1-201ENST00000522976 328 ntBASIC0.7□□□□□ -2.3
PCDH11XQ9BZA7 AC109635.3-201ENST00000529536 185 ntBASIC0.7□□□□□ -2.3
PCDH11XQ9BZA7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms