Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 AC025750.2-201ENST00000442609 450 ntBASIC3.41□□□□□ -1.86
ZKSCAN3Q9BRR0 AC097462.1-201ENST00000514125 324 ntBASIC3.41□□□□□ -1.86
ZKSCAN3Q9BRR0 RNA5SP76-201ENST00000516277 87 ntBASIC3.41□□□□□ -1.86
ZKSCAN3Q9BRR0 Y_RNA.712-201ENST00000517011 92 ntBASIC3.41□□□□□ -1.86
ZKSCAN3Q9BRR0 AC105245.1-201ENST00000581934 244 ntBASIC3.41□□□□□ -1.86
ZKSCAN3Q9BRR0 AL929325.1-201ENST00000603096 117 ntBASIC3.41□□□□□ -1.86
ZKSCAN3Q9BRR0 MIR1248-201ENST00000629190 106 ntBASIC3.41□□□□□ -1.86
ZKSCAN3Q9BRR0 AC080128.1-201ENST00000474389 1917 ntBASIC3.4□□□□□ -1.86
ZKSCAN3Q9BRR0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
ZKSCAN3Q9BRR0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
ZKSCAN3Q9BRR0 RNU6-153P-201ENST00000364422 104 ntBASIC3.4□□□□□ -1.87
ZKSCAN3Q9BRR0 NDUFB4P4-201ENST00000404822 243 ntBASIC3.4□□□□□ -1.87
ZKSCAN3Q9BRR0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.4□□□□□ -1.87
ZKSCAN3Q9BRR0 CYCSP49-201ENST00000420810 319 ntBASIC3.4□□□□□ -1.87
ZKSCAN3Q9BRR0 AL357134.1-201ENST00000445848 426 ntBASIC3.4□□□□□ -1.87
ZKSCAN3Q9BRR0 EEF1B2P7-201ENST00000451177 676 ntBASIC3.4□□□□□ -1.87
ZKSCAN3Q9BRR0 RPS27P29-201ENST00000463110 252 ntBASIC3.4□□□□□ -1.87
ZKSCAN3Q9BRR0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.4□□□□□ -1.87
ZKSCAN3Q9BRR0 SNORD77.4-201ENST00000516158 81 ntBASIC3.4□□□□□ -1.87
ZKSCAN3Q9BRR0 MIR4438-201ENST00000585271 93 ntBASIC3.4□□□□□ -1.87
ZKSCAN3Q9BRR0 uc_338.4-201ENST00000616635 176 ntBASIC3.4□□□□□ -1.87
ZKSCAN3Q9BRR0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.4□□□□□ -1.87
ZKSCAN3Q9BRR0 AL365361.1-201ENST00000566942 3481 ntBASIC3.4□□□□□ -1.87
ZKSCAN3Q9BRR0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
ZKSCAN3Q9BRR0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 SNORA9.2-201ENST00000365361 133 ntBASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 RNU6-136P-201ENST00000384663 107 ntBASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 MIR218-1-201ENST00000384999 110 ntBASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 RNU2-70P-201ENST00000410718 179 ntBASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 RNU6-1328P-201ENST00000410938 106 ntBASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 RNU2-32P-201ENST00000411193 191 ntBASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 AC063976.3-201ENST00000426849 329 ntBASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 AL135938.1-201ENST00000443141 297 ntBASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 RPS4XP11-201ENST00000446897 772 ntBASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 AC245102.2-201ENST00000448956 180 ntBASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 RPS29P21-201ENST00000496272 170 ntBASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 RN7SKP43-201ENST00000516173 320 ntBASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 Y_RNA.692-201ENST00000516627 105 ntBASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 RNU7-172P-201ENST00000517125 64 ntBASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 RPL23AP91-201ENST00000569211 455 ntBASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 MIR3199-1-201ENST00000582434 88 ntBASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 AC107294.3-201ENST00000609211 526 ntBASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 MIR5739-201ENST00000619803 80 ntBASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 MIR7515-201ENST00000637837 67 ntBASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 AL035425.3-201ENST00000564206 4996 ntBASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.39□□□□□ -1.87
ZKSCAN3Q9BRR0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ZKSCAN3Q9BRR0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.38□□□□□ -1.87
ZKSCAN3Q9BRR0 Y_RNA.120-201ENST00000363304 110 ntBASIC3.38□□□□□ -1.87
ZKSCAN3Q9BRR0 RNU6-1336P-201ENST00000383886 109 ntBASIC3.38□□□□□ -1.87
ZKSCAN3Q9BRR0 RNU6-476P-201ENST00000384726 107 ntBASIC3.38□□□□□ -1.87
ZKSCAN3Q9BRR0 SNORA26-201ENST00000391286 122 ntBASIC3.38□□□□□ -1.87
ZKSCAN3Q9BRR0 COTL1P1-201ENST00000422309 375 ntBASIC3.38□□□□□ -1.87
ZKSCAN3Q9BRR0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.38□□□□□ -1.87
ZKSCAN3Q9BRR0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.38□□□□□ -1.87
ZKSCAN3Q9BRR0 AP001486.1-201ENST00000463339 476 ntBASIC3.38□□□□□ -1.87
ZKSCAN3Q9BRR0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.38□□□□□ -1.87
ZKSCAN3Q9BRR0 SEM1P1-201ENST00000506694 209 ntBASIC3.38□□□□□ -1.87
ZKSCAN3Q9BRR0 RNU6-126P-201ENST00000516685 103 ntBASIC3.38□□□□□ -1.87
ZKSCAN3Q9BRR0 AC097639.2-201ENST00000603159 172 ntBASIC3.38□□□□□ -1.87
ZKSCAN3Q9BRR0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.38□□□□□ -1.87
ZKSCAN3Q9BRR0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
ZKSCAN3Q9BRR0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.38□□□□□ -1.87
ZKSCAN3Q9BRR0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.38□□□□□ -1.87
ZKSCAN3Q9BRR0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZKSCAN3Q9BRR0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZKSCAN3Q9BRR0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ZKSCAN3Q9BRR0 SNORA80A-201ENST00000363922 136 ntBASIC3.37□□□□□ -1.87
ZKSCAN3Q9BRR0 AL158823.1-201ENST00000418441 478 ntBASIC3.37□□□□□ -1.87
ZKSCAN3Q9BRR0 MTCO1P44-201ENST00000441935 243 ntBASIC3.37□□□□□ -1.87
ZKSCAN3Q9BRR0 CYP2C59P-201ENST00000457790 269 ntBASIC3.37□□□□□ -1.87
ZKSCAN3Q9BRR0 YWHAEP4-201ENST00000505390 198 ntBASIC3.37□□□□□ -1.87
ZKSCAN3Q9BRR0 SNORA4.4-201ENST00000515921 135 ntBASIC3.37□□□□□ -1.87
ZKSCAN3Q9BRR0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.37□□□□□ -1.87
ZKSCAN3Q9BRR0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.37□□□□□ -1.87
ZKSCAN3Q9BRR0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.37□□□□□ -1.87
ZKSCAN3Q9BRR0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
ZKSCAN3Q9BRR0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
ZKSCAN3Q9BRR0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ZKSCAN3Q9BRR0 Y_RNA.525-201ENST00000384570 113 ntBASIC3.36□□□□□ -1.87
ZKSCAN3Q9BRR0 RNU1-101P-201ENST00000391171 127 ntBASIC3.36□□□□□ -1.87
ZKSCAN3Q9BRR0 FO393413.1-201ENST00000402892 195 ntBASIC3.36□□□□□ -1.87
ZKSCAN3Q9BRR0 RPL39P40-201ENST00000445481 146 ntBASIC3.36□□□□□ -1.87
ZKSCAN3Q9BRR0 SNORD11-201ENST00000459124 84 ntBASIC3.36□□□□□ -1.87
ZKSCAN3Q9BRR0 AL049873.1-201ENST00000480540 376 ntBASIC3.36□□□□□ -1.87
ZKSCAN3Q9BRR0 CKS1BP2-201ENST00000497342 240 ntBASIC3.36□□□□□ -1.87
ZKSCAN3Q9BRR0 AC011604.1-201ENST00000545978 196 ntBASIC3.36□□□□□ -1.87
ZKSCAN3Q9BRR0 AC079600.2-201ENST00000550076 130 ntBASIC3.36□□□□□ -1.87
ZKSCAN3Q9BRR0 MIR3117-201ENST00000584034 78 ntBASIC3.36□□□□□ -1.87
ZKSCAN3Q9BRR0 AC131055.1-201ENST00000584626 316 ntBASIC3.36□□□□□ -1.87
ZKSCAN3Q9BRR0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.36□□□□□ -1.87
ZKSCAN3Q9BRR0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
ZKSCAN3Q9BRR0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
ZKSCAN3Q9BRR0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ZKSCAN3Q9BRR0 RNU6-235P-201ENST00000362644 107 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 278.3 ms