Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
EBF4Q9BQW3 YWHAEP4-201ENST00000505390 198 ntBASIC1.37□□□□□ -2.19
EBF4Q9BQW3 AC008834.1-201ENST00000511612 175 ntBASIC1.37□□□□□ -2.19
EBF4Q9BQW3 SNORA25.15-201ENST00000516487 89 ntBASIC1.37□□□□□ -2.19
EBF4Q9BQW3 Y_RNA.683-201ENST00000516508 93 ntBASIC1.37□□□□□ -2.19
EBF4Q9BQW3 RNU6-635P-201ENST00000516651 102 ntBASIC1.37□□□□□ -2.19
EBF4Q9BQW3 AL117187.1-201ENST00000555482 181 ntBASIC1.37□□□□□ -2.19
EBF4Q9BQW3 MIR4298-201ENST00000584380 73 ntBASIC1.37□□□□□ -2.19
EBF4Q9BQW3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.37□□□□□ -2.19
EBF4Q9BQW3 AC008873.1-201ENST00000625051 138 ntBASIC1.37□□□□□ -2.19
EBF4Q9BQW3 AC068205.3-201ENST00000636385 468 ntBASIC1.37□□□□□ -2.19
EBF4Q9BQW3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
EBF4Q9BQW3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.37□□□□□ -2.19
EBF4Q9BQW3 AL356292.1-201ENST00000283110 373 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 SNORD81.1-201ENST00000363064 77 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 RNU6-280P-201ENST00000364145 104 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 RNU6-245P-201ENST00000384020 107 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 SNORA70B-201ENST00000384210 135 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 Y_RNA.551-201ENST00000384661 102 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 MIR517C-201ENST00000385103 95 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 RNU6-1109P-201ENST00000391187 107 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 MIR934-201ENST00000401241 83 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.36□□□□□ -2.19
EBF4Q9BQW3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.36□□□□□ -2.19
EBF4Q9BQW3 FCF1P4-201ENST00000448326 183 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 HSPE1P24-201ENST00000450782 238 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 RPS29P29-201ENST00000456396 171 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.36□□□□□ -2.19
EBF4Q9BQW3 AC093852.1-201ENST00000503587 266 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 AC011406.1-201ENST00000512440 370 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 RNY3P15-201ENST00000516297 97 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 RNU6-344P-201ENST00000516635 111 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.36□□□□□ -2.19
EBF4Q9BQW3 AC023442.1-201ENST00000531247 422 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.36□□□□□ -2.19
EBF4Q9BQW3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.36□□□□□ -2.19
EBF4Q9BQW3 AC018448.1-201ENST00000552843 316 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 RPS29P30-201ENST00000600975 111 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 AL390123.1-201ENST00000603216 237 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 AC010205.1-201ENST00000616668 449 ntBASIC1.36□□□□□ -2.19
EBF4Q9BQW3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
EBF4Q9BQW3 Y_RNA.16-201ENST00000362421 102 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 Y_RNA.19-201ENST00000362462 99 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 Y_RNA.47-201ENST00000362697 108 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 snoU2_19.2-201ENST00000363024 80 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 RNU6-770P-201ENST00000363929 105 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 RNU6-1235P-201ENST00000384559 107 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 MT-TW-201ENST00000387382 68 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 SNORD78.2-201ENST00000391076 69 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 MIR1261-201ENST00000408659 82 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 Y_RNA.595-201ENST00000410403 105 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 MTCO3P19-201ENST00000415864 321 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 AC016909.1-201ENST00000415916 166 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 SDAD1P3-201ENST00000427380 333 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 RAB28P5-201ENST00000427490 651 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.35□□□□□ -2.19
EBF4Q9BQW3 AC005002.2-201ENST00000438228 269 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 MTND3P2-201ENST00000438452 342 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 SNRPGP13-201ENST00000442212 177 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 UQCRBP2-201ENST00000447827 297 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 RNU6-625P-201ENST00000459412 107 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 RNU6-498P-201ENST00000459468 107 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 RNU6-107P-201ENST00000516643 102 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 RNU6-1198P-201ENST00000516904 67 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 MIR2355-201ENST00000517199 87 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 RNA5SP437-201ENST00000517249 129 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.35□□□□□ -2.19
EBF4Q9BQW3 AC015720.1-201ENST00000565251 277 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 MIR4503-201ENST00000582187 83 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 AL162730.1-201ENST00000605734 292 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 AL121655.1-201ENST00000605811 308 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.35□□□□□ -2.19
EBF4Q9BQW3 SNORD11B-201ENST00000607707 90 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 AC004467.1-201ENST00000615678 330 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 AC006001.4-201ENST00000622243 395 ntBASIC1.35□□□□□ -2.19
EBF4Q9BQW3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.35□□□□□ -2.19
EBF4Q9BQW3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
EBF4Q9BQW3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
EBF4Q9BQW3 U8.1-201ENST00000362843 134 ntBASIC1.34□□□□□ -2.19
EBF4Q9BQW3 RNU4-50P-201ENST00000364361 141 ntBASIC1.34□□□□□ -2.19
EBF4Q9BQW3 Y_RNA.396-201ENST00000383949 103 ntBASIC1.34□□□□□ -2.19
EBF4Q9BQW3 RNU6-472P-201ENST00000384299 107 ntBASIC1.34□□□□□ -2.19
EBF4Q9BQW3 Y_RNA.498-201ENST00000384460 102 ntBASIC1.34□□□□□ -2.19
EBF4Q9BQW3 Y_RNA.602-201ENST00000410535 92 ntBASIC1.34□□□□□ -2.19
EBF4Q9BQW3 RNU6-57P-201ENST00000411348 103 ntBASIC1.34□□□□□ -2.19
EBF4Q9BQW3 AC073910.1-201ENST00000445047 438 ntBASIC1.34□□□□□ -2.19
EBF4Q9BQW3 RNU7-57P-201ENST00000459540 60 ntBASIC1.34□□□□□ -2.19
EBF4Q9BQW3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.34□□□□□ -2.19
EBF4Q9BQW3 RNU6-948P-201ENST00000516374 107 ntBASIC1.34□□□□□ -2.19
EBF4Q9BQW3 RNU6-570P-201ENST00000517051 105 ntBASIC1.34□□□□□ -2.19
EBF4Q9BQW3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.34□□□□□ -2.19
EBF4Q9BQW3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.34□□□□□ -2.19
EBF4Q9BQW3 AL160236.1-201ENST00000556317 195 ntBASIC1.34□□□□□ -2.19
EBF4Q9BQW3 MIR4300-201ENST00000581016 96 ntBASIC1.34□□□□□ -2.19
EBF4Q9BQW3 AL355297.3-201ENST00000604082 446 ntBASIC1.34□□□□□ -2.19
EBF4Q9BQW3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.34□□□□□ -2.19
EBF4Q9BQW3 MIR338-201ENST00000636369 67 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 211.5 ms