Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.02□□□□□ -2.09
CLSTN3Q9BQT9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.02□□□□□ -2.09
CLSTN3Q9BQT9 AC005828.6-201ENST00000606610 232 ntBASIC2.02□□□□□ -2.09
CLSTN3Q9BQT9 AL359075.3-201ENST00000613288 217 ntBASIC2.02□□□□□ -2.09
CLSTN3Q9BQT9 uc_338.20-201ENST00000621563 178 ntBASIC2.02□□□□□ -2.09
CLSTN3Q9BQT9 U6.115-201ENST00000636045 103 ntBASIC2.02□□□□□ -2.09
CLSTN3Q9BQT9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLSTN3Q9BQT9 Y_RNA.143-201ENST00000363520 106 ntBASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 RNU6-454P-201ENST00000364292 107 ntBASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 RNU6-1019P-201ENST00000364424 107 ntBASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 RNU6-21P-201ENST00000384710 107 ntBASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 RNU6-417P-201ENST00000384712 107 ntBASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 RNA5SP323-201ENST00000391094 133 ntBASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 MIR873-201ENST00000401120 77 ntBASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 RNU2-20P-201ENST00000410425 191 ntBASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 EBAG9P1-201ENST00000418955 543 ntBASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 AC024067.1-201ENST00000426199 223 ntBASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 AL021397.1-201ENST00000451806 248 ntBASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 SEPT14P8-201ENST00000508026 178 ntBASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 RNU6-897P-201ENST00000517135 105 ntBASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 AP002001.1-203ENST00000534002 267 ntBASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 MIR4287-201ENST00000579398 78 ntBASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 AC005034.5-201ENST00000604219 466 ntBASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 PART1_1.1-201ENST00000611761 217 ntBASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 ZNF702P-202ENST00000434269 1966 ntBASIC2.01□□□□□ -2.09
CLSTN3Q9BQT9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CLSTN3Q9BQT9 MIR337-201ENST00000362281 93 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 Y_RNA.145-201ENST00000363527 102 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 Y_RNA.153-201ENST00000363615 91 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 Y_RNA.446-201ENST00000384178 104 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 SNORA20B-201ENST00000384220 132 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 AL117342.1-201ENST00000404861 406 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 MIR1287-201ENST00000408492 90 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 RNU6-130P-201ENST00000411112 103 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 MTND2P23-201ENST00000422990 651 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2□□□□□ -2.09
CLSTN3Q9BQT9 AC025033.1-201ENST00000463883 194 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 RPS27P22-201ENST00000478056 241 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 RNU6-327P-201ENST00000516270 127 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 RNU6-155P-201ENST00000516347 100 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 RNU7-110P-201ENST00000516891 62 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 Y_RNA.720-201ENST00000517166 92 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 AC131281.1-201ENST00000522984 164 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2□□□□□ -2.09
CLSTN3Q9BQT9 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2□□□□□ -2.09
CLSTN3Q9BQT9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2□□□□□ -2.09
CLSTN3Q9BQT9 MIR4781-201ENST00000585250 76 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 AC008737.2-201ENST00000599446 118 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 SNORD113-5-201ENST00000607261 78 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 U6.73-201ENST00000619194 103 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 SDR42E1P4-201ENST00000620894 481 ntBASIC2□□□□□ -2.09
CLSTN3Q9BQT9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLSTN3Q9BQT9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CLSTN3Q9BQT9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CLSTN3Q9BQT9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CLSTN3Q9BQT9 Y_RNA.287-201ENST00000364853 94 ntBASIC1.99□□□□□ -2.09
CLSTN3Q9BQT9 MIR9-3-201ENST00000385084 90 ntBASIC1.99□□□□□ -2.09
CLSTN3Q9BQT9 U3.40-201ENST00000408706 208 ntBASIC1.99□□□□□ -2.09
CLSTN3Q9BQT9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CLSTN3Q9BQT9 MRPS10P1-201ENST00000448483 130 ntBASIC1.99□□□□□ -2.09
CLSTN3Q9BQT9 RNU7-99P-201ENST00000516271 62 ntBASIC1.99□□□□□ -2.09
CLSTN3Q9BQT9 MIR5094-201ENST00000578766 85 ntBASIC1.99□□□□□ -2.09
CLSTN3Q9BQT9 MIR4438-201ENST00000585271 93 ntBASIC1.99□□□□□ -2.09
CLSTN3Q9BQT9 RAC1P9-201ENST00000604990 392 ntBASIC1.99□□□□□ -2.09
CLSTN3Q9BQT9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CLSTN3Q9BQT9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CLSTN3Q9BQT9 SNORA27.1-201ENST00000362604 124 ntBASIC1.98□□□□□ -2.09
CLSTN3Q9BQT9 Y_RNA.101-201ENST00000363154 102 ntBASIC1.98□□□□□ -2.09
CLSTN3Q9BQT9 RNU6-770P-201ENST00000363929 105 ntBASIC1.98□□□□□ -2.09
CLSTN3Q9BQT9 Y_RNA.331-201ENST00000365267 102 ntBASIC1.98□□□□□ -2.09
CLSTN3Q9BQT9 RNU6-937P-201ENST00000384325 106 ntBASIC1.98□□□□□ -2.09
CLSTN3Q9BQT9 AL355796.1-201ENST00000406706 323 ntBASIC1.98□□□□□ -2.09
CLSTN3Q9BQT9 RNU6-710P-201ENST00000410424 105 ntBASIC1.98□□□□□ -2.09
CLSTN3Q9BQT9 AC096920.1-201ENST00000423991 241 ntBASIC1.98□□□□□ -2.09
CLSTN3Q9BQT9 RNU7-94P-201ENST00000459576 63 ntBASIC1.98□□□□□ -2.09
CLSTN3Q9BQT9 RNA5SP20-201ENST00000515976 84 ntBASIC1.98□□□□□ -2.09
CLSTN3Q9BQT9 RNU6-397P-201ENST00000516226 104 ntBASIC1.98□□□□□ -2.09
CLSTN3Q9BQT9 RPL21P9-201ENST00000556149 474 ntBASIC1.98□□□□□ -2.09
CLSTN3Q9BQT9 MIR3935-201ENST00000583472 104 ntBASIC1.98□□□□□ -2.09
CLSTN3Q9BQT9 MIR376A1-201ENST00000616574 68 ntBASIC1.98□□□□□ -2.09
CLSTN3Q9BQT9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.98□□□□□ -2.09
CLSTN3Q9BQT9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CLSTN3Q9BQT9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 RNU6-324P-201ENST00000363957 106 ntBASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 SNORD115-30-201ENST00000364117 82 ntBASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 Y_RNA.210-201ENST00000364161 110 ntBASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 MIR562-201ENST00000384894 95 ntBASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 MIR17-201ENST00000385012 84 ntBASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 SNORA17.3-201ENST00000391159 129 ntBASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 AC099677.2-201ENST00000436385 175 ntBASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 RPL23AP6-201ENST00000446637 472 ntBASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 RPL23AP3-201ENST00000453844 468 ntBASIC1.97□□□□□ -2.09
CLSTN3Q9BQT9 AC010655.3-201ENST00000478818 450 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 180.5 ms