Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 SNORA67.5-201ENST00000391036 107 ntBASIC1.33□□□□□ -2.2
SSX3Q99909 AL034345.1-201ENST00000407768 123 ntBASIC1.33□□□□□ -2.2
SSX3Q99909 FCF1P4-201ENST00000448326 183 ntBASIC1.33□□□□□ -2.2
SSX3Q99909 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.33□□□□□ -2.2
SSX3Q99909 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.33□□□□□ -2.2
SSX3Q99909 AC019288.1-201ENST00000557918 224 ntBASIC1.33□□□□□ -2.2
SSX3Q99909 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.33□□□□□ -2.2
SSX3Q99909 AC040896.1-201ENST00000613819 479 ntBASIC1.33□□□□□ -2.2
SSX3Q99909 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SSX3Q99909 Y_RNA.356-201ENST00000365475 113 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 RNA5SP259-201ENST00000365541 109 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 RNY3P4-201ENST00000384428 101 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 RNU6-1065P-201ENST00000384513 106 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 RNU6-376P-201ENST00000384731 106 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 MIR873-201ENST00000401120 77 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.32□□□□□ -2.2
SSX3Q99909 SUMO1P2-201ENST00000452524 304 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 Y_RNA.632-201ENST00000459189 102 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 FGF7P4-201ENST00000509595 295 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 RNU6-1278P-201ENST00000516130 107 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 Y_RNA.702-201ENST00000516843 96 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 RNU6-699P-201ENST00000517081 110 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 SNORD53B-201ENST00000577887 78 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 MIR4255-201ENST00000579351 72 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 AL162424.1-201ENST00000602325 221 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 AL390123.1-201ENST00000603216 237 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 AP000942.3-201ENST00000603702 160 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 AL365434.2-201ENST00000607979 234 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 AL021879.1-201ENST00000611756 288 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 U2.1-201ENST00000618978 145 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 MIR6079-201ENST00000635807 62 ntBASIC1.32□□□□□ -2.2
SSX3Q99909 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SSX3Q99909 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SSX3Q99909 RNU6-961P-201ENST00000363893 105 ntBASIC1.31□□□□□ -2.2
SSX3Q99909 RNU6-457P-201ENST00000363999 107 ntBASIC1.31□□□□□ -2.2
SSX3Q99909 Y_RNA.263-201ENST00000364659 114 ntBASIC1.31□□□□□ -2.2
SSX3Q99909 Y_RNA.529-201ENST00000384586 119 ntBASIC1.31□□□□□ -2.2
SSX3Q99909 SNORD78.2-201ENST00000391076 69 ntBASIC1.31□□□□□ -2.2
SSX3Q99909 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.31□□□□□ -2.2
SSX3Q99909 AC108667.1-201ENST00000428618 249 ntBASIC1.31□□□□□ -2.2
SSX3Q99909 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.31□□□□□ -2.2
SSX3Q99909 RNU6-507P-201ENST00000516045 100 ntBASIC1.31□□□□□ -2.2
SSX3Q99909 SUMO2P16-201ENST00000519475 264 ntBASIC1.31□□□□□ -2.2
SSX3Q99909 AC023442.1-201ENST00000531247 422 ntBASIC1.31□□□□□ -2.2
SSX3Q99909 CYP3A52P-201ENST00000563326 91 ntBASIC1.31□□□□□ -2.2
SSX3Q99909 AC005828.6-201ENST00000606610 232 ntBASIC1.31□□□□□ -2.2
SSX3Q99909 AC004467.1-201ENST00000615678 330 ntBASIC1.31□□□□□ -2.2
SSX3Q99909 MIR7974-201ENST00000615835 79 ntBASIC1.31□□□□□ -2.2
SSX3Q99909 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.31□□□□□ -2.2
SSX3Q99909 Y_RNA.428-201ENST00000384078 102 ntBASIC1.3□□□□□ -2.2
SSX3Q99909 MIR562-201ENST00000384894 95 ntBASIC1.3□□□□□ -2.2
SSX3Q99909 SNORA17.3-201ENST00000391159 129 ntBASIC1.3□□□□□ -2.2
SSX3Q99909 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.3□□□□□ -2.2
SSX3Q99909 RN7SKP101-201ENST00000411376 320 ntBASIC1.3□□□□□ -2.2
SSX3Q99909 SNX2P2-201ENST00000424553 323 ntBASIC1.3□□□□□ -2.2
SSX3Q99909 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.3□□□□□ -2.2
SSX3Q99909 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.3□□□□□ -2.2
SSX3Q99909 AC236972.2-201ENST00000434979 310 ntBASIC1.3□□□□□ -2.2
SSX3Q99909 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.3□□□□□ -2.2
SSX3Q99909 AL137792.2-201ENST00000443484 235 ntBASIC1.3□□□□□ -2.2
SSX3Q99909 STAG3L5P-204ENST00000443759 179 ntBASIC1.3□□□□□ -2.2
SSX3Q99909 PGBD4P5-201ENST00000445958 426 ntBASIC1.3□□□□□ -2.2
SSX3Q99909 AC091021.1-201ENST00000468051 388 ntBASIC1.3□□□□□ -2.2
SSX3Q99909 RNU2-56P-201ENST00000516826 190 ntBASIC1.3□□□□□ -2.2
SSX3Q99909 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.3□□□□□ -2.2
SSX3Q99909 AC006380.1-201ENST00000603598 186 ntBASIC1.3□□□□□ -2.2
SSX3Q99909 SNORA28-201ENST00000606769 126 ntBASIC1.3□□□□□ -2.2
SSX3Q99909 AC127459.3-201ENST00000624328 466 ntBASIC1.3□□□□□ -2.2
SSX3Q99909 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.29□□□□□ -2.2
SSX3Q99909 Y_RNA.124-201ENST00000363339 93 ntBASIC1.29□□□□□ -2.2
SSX3Q99909 Y_RNA.146-201ENST00000363549 102 ntBASIC1.29□□□□□ -2.2
SSX3Q99909 Y_RNA.187-201ENST00000363918 113 ntBASIC1.29□□□□□ -2.2
SSX3Q99909 Y_RNA.243-201ENST00000364481 109 ntBASIC1.29□□□□□ -2.2
SSX3Q99909 Y_RNA.265-201ENST00000364677 108 ntBASIC1.29□□□□□ -2.2
SSX3Q99909 Y_RNA.267-201ENST00000364679 109 ntBASIC1.29□□□□□ -2.2
SSX3Q99909 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.29□□□□□ -2.2
SSX3Q99909 MIR150-201ENST00000385048 84 ntBASIC1.29□□□□□ -2.2
SSX3Q99909 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.29□□□□□ -2.2
SSX3Q99909 AC096644.2-201ENST00000429278 159 ntBASIC1.29□□□□□ -2.2
SSX3Q99909 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.29□□□□□ -2.2
SSX3Q99909 SNORD19B-201ENST00000459623 84 ntBASIC1.29□□□□□ -2.2
SSX3Q99909 RPL30P7-201ENST00000479312 323 ntBASIC1.29□□□□□ -2.2
SSX3Q99909 AC023790.1-201ENST00000482174 347 ntBASIC1.29□□□□□ -2.2
SSX3Q99909 RNU6-911P-201ENST00000516523 104 ntBASIC1.29□□□□□ -2.2
SSX3Q99909 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.29□□□□□ -2.2
SSX3Q99909 Y_RNA.463-201ENST00000384271 102 ntBASIC1.28□□□□□ -2.2
SSX3Q99909 RNY3P14-201ENST00000384309 102 ntBASIC1.28□□□□□ -2.2
SSX3Q99909 MIR320A-201ENST00000385302 82 ntBASIC1.28□□□□□ -2.2
SSX3Q99909 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.28□□□□□ -2.2
SSX3Q99909 AL603825.1-201ENST00000438481 80 ntBASIC1.28□□□□□ -2.2
SSX3Q99909 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.28□□□□□ -2.2
SSX3Q99909 RNU7-152P-201ENST00000458982 64 ntBASIC1.28□□□□□ -2.2
SSX3Q99909 RNU6-1012P-201ENST00000516606 109 ntBASIC1.28□□□□□ -2.2
SSX3Q99909 RNU6-341P-201ENST00000516973 96 ntBASIC1.28□□□□□ -2.2
SSX3Q99909 SNORD116.3-201ENST00000517176 78 ntBASIC1.28□□□□□ -2.2
SSX3Q99909 RNU2-12P-201ENST00000517216 168 ntBASIC1.28□□□□□ -2.2
SSX3Q99909 AC006600.1-201ENST00000572529 153 ntBASIC1.28□□□□□ -2.2
SSX3Q99909 AC073349.3-201ENST00000617616 186 ntBASIC1.28□□□□□ -2.2
SSX3Q99909 AL513423.1-201ENST00000621695 132 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms