Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 Y_RNA.27-201ENST00000362540 103 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 Y_RNA.191-201ENST00000363972 113 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 RNU6-454P-201ENST00000364292 107 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 Y_RNA.460-201ENST00000384255 102 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 RNY1P14-201ENST00000384426 108 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 Y_RNA.535-201ENST00000384612 99 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 MIR520A-201ENST00000384862 85 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 SNORD78.2-201ENST00000391076 69 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 MTCO3P19-201ENST00000415864 321 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.6□□□□□ -2.15
CDCA3Q99618 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.6□□□□□ -2.15
CDCA3Q99618 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.6□□□□□ -2.15
CDCA3Q99618 AL137792.2-201ENST00000443484 235 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 AC010469.2-201ENST00000496412 480 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 AL163195.1-201ENST00000496941 348 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 HMGN1P13-201ENST00000505795 138 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 AC010598.1-201ENST00000510378 103 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 RNU6-1012P-201ENST00000516606 109 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 RNU1-142P-201ENST00000516682 145 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.6□□□□□ -2.15
CDCA3Q99618 MIR4659A-201ENST00000580269 81 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.6□□□□□ -2.15
CDCA3Q99618 MIR5188-201ENST00000583467 113 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 SNORD58B-201ENST00000607313 66 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 AC004467.1-201ENST00000615678 330 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 AC007485.1-201ENST00000616755 206 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 AL353770.2-201ENST00000620024 78 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 AL160413.1-201ENST00000622780 310 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 AL606534.2-204ENST00000635008 178 ntBASIC1.6□□□□□ -2.15
CDCA3Q99618 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CDCA3Q99618 MIR410-201ENST00000362222 80 ntBASIC1.59□□□□□ -2.15
CDCA3Q99618 RNU4-13P-201ENST00000364019 141 ntBASIC1.59□□□□□ -2.15
CDCA3Q99618 RNU1-115P-201ENST00000365329 160 ntBASIC1.59□□□□□ -2.15
CDCA3Q99618 SNORD42.2-201ENST00000365570 69 ntBASIC1.59□□□□□ -2.15
CDCA3Q99618 RNU6-1310P-201ENST00000384153 107 ntBASIC1.59□□□□□ -2.15
CDCA3Q99618 SNORA20B-201ENST00000384220 132 ntBASIC1.59□□□□□ -2.15
CDCA3Q99618 RNU6-308P-201ENST00000390957 107 ntBASIC1.59□□□□□ -2.15
CDCA3Q99618 AL355796.1-201ENST00000406706 323 ntBASIC1.59□□□□□ -2.15
CDCA3Q99618 AL160004.2-201ENST00000432935 350 ntBASIC1.59□□□□□ -2.15
CDCA3Q99618 AC073910.1-201ENST00000445047 438 ntBASIC1.59□□□□□ -2.15
CDCA3Q99618 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.59□□□□□ -2.15
CDCA3Q99618 AC023157.2-201ENST00000540596 141 ntBASIC1.59□□□□□ -2.15
CDCA3Q99618 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.59□□□□□ -2.15
CDCA3Q99618 AL137100.2-201ENST00000555786 315 ntBASIC1.59□□□□□ -2.15
CDCA3Q99618 MIR4452-201ENST00000583004 71 ntBASIC1.59□□□□□ -2.15
CDCA3Q99618 AC022432.1-201ENST00000595739 310 ntBASIC1.59□□□□□ -2.15
CDCA3Q99618 U6.73-201ENST00000619194 103 ntBASIC1.59□□□□□ -2.15
CDCA3Q99618 U6.92-201ENST00000636464 89 ntBASIC1.59□□□□□ -2.15
CDCA3Q99618 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CDCA3Q99618 Y_RNA.31-201ENST00000362574 102 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 Y_RNA.112-201ENST00000363250 102 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 RNU6-626P-201ENST00000363354 107 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 SNORD48-201ENST00000364953 64 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 Y_RNA.394-201ENST00000383942 103 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 Y_RNA.395-201ENST00000383945 109 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 Y_RNA.445-201ENST00000384168 102 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 MIR515-2-201ENST00000384883 83 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 MIR515-1-201ENST00000384884 83 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CDCA3Q99618 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.58□□□□□ -2.16
CDCA3Q99618 AC005002.2-201ENST00000438228 269 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
CDCA3Q99618 HSPE1P9-201ENST00000440046 311 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 RPS27P22-201ENST00000478056 241 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 RPL26P26-201ENST00000480251 434 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 RNA5SP102-201ENST00000516865 106 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 RNA5SP437-201ENST00000517249 129 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 AC023442.1-201ENST00000531247 422 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 AC055872.1-201ENST00000570978 278 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 AL359075.3-201ENST00000613288 217 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 AC240442.1-201ENST00000616055 283 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.58□□□□□ -2.16
CDCA3Q99618 U6.115-201ENST00000636045 103 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 U6.108-201ENST00000637764 58 ntBASIC1.58□□□□□ -2.16
CDCA3Q99618 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CDCA3Q99618 SNORA72.2-201ENST00000365028 127 ntBASIC1.57□□□□□ -2.16
CDCA3Q99618 RNU6-20P-201ENST00000384106 107 ntBASIC1.57□□□□□ -2.16
CDCA3Q99618 RNU6-439P-201ENST00000384188 106 ntBASIC1.57□□□□□ -2.16
CDCA3Q99618 RNU6-474P-201ENST00000384243 107 ntBASIC1.57□□□□□ -2.16
CDCA3Q99618 MIR1323-201ENST00000408090 73 ntBASIC1.57□□□□□ -2.16
CDCA3Q99618 EBAG9P1-201ENST00000418955 543 ntBASIC1.57□□□□□ -2.16
CDCA3Q99618 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.57□□□□□ -2.16
CDCA3Q99618 MTND1P14-201ENST00000427400 950 ntBASIC1.57□□□□□ -2.16
CDCA3Q99618 Y_RNA.639-201ENST00000458981 102 ntBASIC1.57□□□□□ -2.16
CDCA3Q99618 SNORA40.14-201ENST00000516543 86 ntBASIC1.57□□□□□ -2.16
CDCA3Q99618 AC024995.1-201ENST00000523014 93 ntBASIC1.57□□□□□ -2.16
CDCA3Q99618 MIR4438-201ENST00000585271 93 ntBASIC1.57□□□□□ -2.16
CDCA3Q99618 RPS29P30-201ENST00000600975 111 ntBASIC1.57□□□□□ -2.16
CDCA3Q99618 AC103810.8-201ENST00000607347 118 ntBASIC1.57□□□□□ -2.16
CDCA3Q99618 AC091812.1-201ENST00000432235 1948 ntBASIC1.57□□□□□ -2.16
CDCA3Q99618 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CDCA3Q99618 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.56□□□□□ -2.16
CDCA3Q99618 SNORA63D-201ENST00000364359 132 ntBASIC1.56□□□□□ -2.16
CDCA3Q99618 RNU6-407P-201ENST00000365280 104 ntBASIC1.56□□□□□ -2.16
CDCA3Q99618 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.56□□□□□ -2.16
CDCA3Q99618 AC069257.2-201ENST00000441819 155 ntBASIC1.56□□□□□ -2.16
CDCA3Q99618 RN7SKP295-201ENST00000517264 153 ntBASIC1.56□□□□□ -2.16
CDCA3Q99618 AL138825.1-201ENST00000618587 192 ntBASIC1.56□□□□□ -2.16
CDCA3Q99618 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.56□□□□□ -2.16
CDCA3Q99618 AP000648.3-201ENST00000623539 4507 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 321.9 ms