Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 AC138915.1-201ENST00000565427 1685 ntBASIC2.54□□□□□ -2
PNKPQ96T60 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.54□□□□□ -2
PNKPQ96T60 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.54□□□□□ -2
PNKPQ96T60 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
PNKPQ96T60 RNU6-682P-201ENST00000363843 106 ntBASIC2.54□□□□□ -2
PNKPQ96T60 Y_RNA.180-201ENST00000363867 113 ntBASIC2.54□□□□□ -2
PNKPQ96T60 Y_RNA.262-201ENST00000364641 102 ntBASIC2.54□□□□□ -2
PNKPQ96T60 Y_RNA.341-201ENST00000365341 102 ntBASIC2.54□□□□□ -2
PNKPQ96T60 AL359511.1-201ENST00000402970 211 ntBASIC2.54□□□□□ -2
PNKPQ96T60 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.54□□□□□ -2
PNKPQ96T60 AC003685.2-201ENST00000422795 395 ntBASIC2.54□□□□□ -2
PNKPQ96T60 AC010531.2-201ENST00000465012 153 ntBASIC2.54□□□□□ -2
PNKPQ96T60 AP005660.1-201ENST00000522972 293 ntBASIC2.54□□□□□ -2
PNKPQ96T60 AC068700.1-201ENST00000565862 3754 ntBASIC2.54□□□□□ -2
PNKPQ96T60 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PNKPQ96T60 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
PNKPQ96T60 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PNKPQ96T60 Y_RNA.310-201ENST00000365063 113 ntBASIC2.53□□□□□ -2
PNKPQ96T60 Y_RNA.368-201ENST00000365547 113 ntBASIC2.53□□□□□ -2
PNKPQ96T60 RNU6-1235P-201ENST00000384559 107 ntBASIC2.53□□□□□ -2
PNKPQ96T60 MTCO2P33-201ENST00000402100 465 ntBASIC2.53□□□□□ -2
PNKPQ96T60 AL603908.1-201ENST00000406098 201 ntBASIC2.53□□□□□ -2
PNKPQ96T60 RN7SKP51-201ENST00000410781 304 ntBASIC2.53□□□□□ -2
PNKPQ96T60 Z98742.3-201ENST00000418637 326 ntBASIC2.53□□□□□ -2
PNKPQ96T60 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.53□□□□□ -2
PNKPQ96T60 RNU6-498P-201ENST00000459468 107 ntBASIC2.53□□□□□ -2
PNKPQ96T60 AC018868.1-201ENST00000491307 315 ntBASIC2.53□□□□□ -2
PNKPQ96T60 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.53□□□□□ -2
PNKPQ96T60 AC074198.2-201ENST00000508153 258 ntBASIC2.53□□□□□ -2
PNKPQ96T60 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.53□□□□□ -2
PNKPQ96T60 AC093259.1-201ENST00000509755 300 ntBASIC2.53□□□□□ -2
PNKPQ96T60 SNORA70.12-201ENST00000516084 153 ntBASIC2.53□□□□□ -2
PNKPQ96T60 AC025647.1-201ENST00000517879 253 ntBASIC2.53□□□□□ -2
PNKPQ96T60 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PNKPQ96T60 Y_RNA.287-201ENST00000364853 94 ntBASIC2.52□□□□□ -2.01
PNKPQ96T60 RNU6-407P-201ENST00000365280 104 ntBASIC2.52□□□□□ -2.01
PNKPQ96T60 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
PNKPQ96T60 SNORA72.4-201ENST00000384174 132 ntBASIC2.52□□□□□ -2.01
PNKPQ96T60 MIR561-201ENST00000385216 97 ntBASIC2.52□□□□□ -2.01
PNKPQ96T60 MIR873-201ENST00000401120 77 ntBASIC2.52□□□□□ -2.01
PNKPQ96T60 RN7SKP192-201ENST00000411291 327 ntBASIC2.52□□□□□ -2.01
PNKPQ96T60 AL135786.1-201ENST00000415892 214 ntBASIC2.52□□□□□ -2.01
PNKPQ96T60 AC016909.1-201ENST00000415916 166 ntBASIC2.52□□□□□ -2.01
PNKPQ96T60 MTND2P29-201ENST00000438595 412 ntBASIC2.52□□□□□ -2.01
PNKPQ96T60 AL445687.1-201ENST00000439946 251 ntBASIC2.52□□□□□ -2.01
PNKPQ96T60 RPL23AP7-203ENST00000449021 469 ntBASIC2.52□□□□□ -2.01
PNKPQ96T60 AL137159.1-201ENST00000452808 512 ntBASIC2.52□□□□□ -2.01
PNKPQ96T60 MIR5692C2-201ENST00000577959 77 ntBASIC2.52□□□□□ -2.01
PNKPQ96T60 MIR3684-201ENST00000579779 74 ntBASIC2.52□□□□□ -2.01
PNKPQ96T60 AL078604.3-201ENST00000615580 211 ntBASIC2.52□□□□□ -2.01
PNKPQ96T60 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
PNKPQ96T60 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
PNKPQ96T60 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PNKPQ96T60 SNORA27.1-201ENST00000362604 124 ntBASIC2.51□□□□□ -2.01
PNKPQ96T60 RNU4-10P-201ENST00000364383 140 ntBASIC2.51□□□□□ -2.01
PNKPQ96T60 Y_RNA.233-201ENST00000364407 101 ntBASIC2.51□□□□□ -2.01
PNKPQ96T60 Y_RNA.456-201ENST00000384232 111 ntBASIC2.51□□□□□ -2.01
PNKPQ96T60 MIR627-201ENST00000384979 97 ntBASIC2.51□□□□□ -2.01
PNKPQ96T60 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
PNKPQ96T60 RNA5SP425-201ENST00000410336 112 ntBASIC2.51□□□□□ -2.01
PNKPQ96T60 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.51□□□□□ -2.01
PNKPQ96T60 AC104332.1-201ENST00000440471 797 ntBASIC2.51□□□□□ -2.01
PNKPQ96T60 MTCO1P44-201ENST00000441935 243 ntBASIC2.51□□□□□ -2.01
PNKPQ96T60 Z96811.1-201ENST00000445880 108 ntBASIC2.51□□□□□ -2.01
PNKPQ96T60 AC234781.5-201ENST00000508429 271 ntBASIC2.51□□□□□ -2.01
PNKPQ96T60 AC010598.1-201ENST00000510378 103 ntBASIC2.51□□□□□ -2.01
PNKPQ96T60 RNU6-1337P-201ENST00000516525 95 ntBASIC2.51□□□□□ -2.01
PNKPQ96T60 RNU6-667P-201ENST00000517186 102 ntBASIC2.51□□□□□ -2.01
PNKPQ96T60 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.51□□□□□ -2.01
PNKPQ96T60 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.51□□□□□ -2.01
PNKPQ96T60 MIR3616-201ENST00000584070 92 ntBASIC2.51□□□□□ -2.01
PNKPQ96T60 AC072026.1-201ENST00000605023 201 ntBASIC2.51□□□□□ -2.01
PNKPQ96T60 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.51□□□□□ -2.01
PNKPQ96T60 AC067747.1-201ENST00000608026 250 ntBASIC2.51□□□□□ -2.01
PNKPQ96T60 AC013791.1-201ENST00000616619 62 ntBASIC2.51□□□□□ -2.01
PNKPQ96T60 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PNKPQ96T60 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.5□□□□□ -2.01
PNKPQ96T60 MIR340-201ENST00000362125 95 ntBASIC2.5□□□□□ -2.01
PNKPQ96T60 SNORD114-30-201ENST00000364448 72 ntBASIC2.5□□□□□ -2.01
PNKPQ96T60 Y_RNA.332-201ENST00000365271 113 ntBASIC2.5□□□□□ -2.01
PNKPQ96T60 SNORD116-13-201ENST00000384408 92 ntBASIC2.5□□□□□ -2.01
PNKPQ96T60 AC123900.1-201ENST00000420390 96 ntBASIC2.5□□□□□ -2.01
PNKPQ96T60 AC104435.1-201ENST00000483483 166 ntBASIC2.5□□□□□ -2.01
PNKPQ96T60 RNA5SP82-201ENST00000516707 92 ntBASIC2.5□□□□□ -2.01
PNKPQ96T60 AC021269.2-201ENST00000532318 330 ntBASIC2.5□□□□□ -2.01
PNKPQ96T60 AP000553.5-201ENST00000641933 54 ntBASIC2.5□□□□□ -2.01
PNKPQ96T60 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
PNKPQ96T60 RPS20P10-201ENST00000451209 253 ntBASIC2.49□□□□□ -2.01
PNKPQ96T60 RNU7-141P-201ENST00000459304 62 ntBASIC2.49□□□□□ -2.01
PNKPQ96T60 RNA5SP20-201ENST00000515976 84 ntBASIC2.49□□□□□ -2.01
PNKPQ96T60 SUMO2P18-201ENST00000518873 252 ntBASIC2.49□□□□□ -2.01
PNKPQ96T60 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.49□□□□□ -2.01
PNKPQ96T60 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.49□□□□□ -2.01
PNKPQ96T60 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.48□□□□□ -2.01
PNKPQ96T60 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
PNKPQ96T60 AL356292.1-201ENST00000283110 373 ntBASIC2.48□□□□□ -2.01
PNKPQ96T60 SNORD114-7-201ENST00000362520 77 ntBASIC2.48□□□□□ -2.01
PNKPQ96T60 Y_RNA.293-201ENST00000364908 93 ntBASIC2.48□□□□□ -2.01
PNKPQ96T60 RNU6-1240P-201ENST00000365155 104 ntBASIC2.48□□□□□ -2.01
PNKPQ96T60 SNORA25B-201ENST00000365507 128 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 201.3 ms