Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 Y_RNA.101-201ENST00000363154 102 ntBASIC2.03□□□□□ -2.08
SIN3AQ96ST3 Y_RNA.380-201ENST00000365663 111 ntBASIC2.03□□□□□ -2.08
SIN3AQ96ST3 Y_RNA.422-201ENST00000384054 114 ntBASIC2.03□□□□□ -2.08
SIN3AQ96ST3 RNU6-1160P-201ENST00000384546 104 ntBASIC2.03□□□□□ -2.08
SIN3AQ96ST3 MIR606-201ENST00000384851 96 ntBASIC2.03□□□□□ -2.08
SIN3AQ96ST3 AL117342.1-201ENST00000404861 406 ntBASIC2.03□□□□□ -2.08
SIN3AQ96ST3 AC010655.3-201ENST00000478818 450 ntBASIC2.03□□□□□ -2.08
SIN3AQ96ST3 RNU6-397P-201ENST00000516226 104 ntBASIC2.03□□□□□ -2.08
SIN3AQ96ST3 RNU6-1041P-201ENST00000516254 102 ntBASIC2.03□□□□□ -2.08
SIN3AQ96ST3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.03□□□□□ -2.08
SIN3AQ96ST3 AC006504.6-201ENST00000590142 199 ntBASIC2.03□□□□□ -2.08
SIN3AQ96ST3 AC005176.2-201ENST00000596933 147 ntBASIC2.03□□□□□ -2.08
SIN3AQ96ST3 AL353149.1-201ENST00000610667 244 ntBASIC2.03□□□□□ -2.08
SIN3AQ96ST3 AC004467.1-201ENST00000615678 330 ntBASIC2.03□□□□□ -2.08
SIN3AQ96ST3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
SIN3AQ96ST3 Y_RNA.230-201ENST00000364348 109 ntBASIC2.02□□□□□ -2.09
SIN3AQ96ST3 Y_RNA.439-201ENST00000384119 94 ntBASIC2.02□□□□□ -2.09
SIN3AQ96ST3 Y_RNA.570-201ENST00000384750 101 ntBASIC2.02□□□□□ -2.09
SIN3AQ96ST3 RNA5SP475-201ENST00000410568 110 ntBASIC2.02□□□□□ -2.09
SIN3AQ96ST3 AC008134.1-201ENST00000420943 193 ntBASIC2.02□□□□□ -2.09
SIN3AQ96ST3 AC099677.2-201ENST00000436385 175 ntBASIC2.02□□□□□ -2.09
SIN3AQ96ST3 HMGN2P34-201ENST00000437647 269 ntBASIC2.02□□□□□ -2.09
SIN3AQ96ST3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
SIN3AQ96ST3 SNRPGP13-201ENST00000442212 177 ntBASIC2.02□□□□□ -2.09
SIN3AQ96ST3 ATP5J2P3-201ENST00000451550 258 ntBASIC2.02□□□□□ -2.09
SIN3AQ96ST3 RNU2-12P-201ENST00000517216 168 ntBASIC2.02□□□□□ -2.09
SIN3AQ96ST3 AC136932.1-201ENST00000574771 208 ntBASIC2.02□□□□□ -2.09
SIN3AQ96ST3 AL355297.3-201ENST00000604082 446 ntBASIC2.02□□□□□ -2.09
SIN3AQ96ST3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.02□□□□□ -2.09
SIN3AQ96ST3 Y_RNA.287-201ENST00000364853 94 ntBASIC2.01□□□□□ -2.09
SIN3AQ96ST3 RNU6-1240P-201ENST00000365155 104 ntBASIC2.01□□□□□ -2.09
SIN3AQ96ST3 RNU6-1310P-201ENST00000384153 107 ntBASIC2.01□□□□□ -2.09
SIN3AQ96ST3 RNU6-738P-201ENST00000384531 106 ntBASIC2.01□□□□□ -2.09
SIN3AQ96ST3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SIN3AQ96ST3 MTND2P29-201ENST00000438595 412 ntBASIC2.01□□□□□ -2.09
SIN3AQ96ST3 Y_RNA.638-201ENST00000459374 113 ntBASIC2.01□□□□□ -2.09
SIN3AQ96ST3 RNU6-1046P-201ENST00000516538 107 ntBASIC2.01□□□□□ -2.09
SIN3AQ96ST3 SUMO2P18-201ENST00000518873 252 ntBASIC2.01□□□□□ -2.09
SIN3AQ96ST3 AC131281.1-201ENST00000522984 164 ntBASIC2.01□□□□□ -2.09
SIN3AQ96ST3 AC005786.1-201ENST00000588553 154 ntBASIC2.01□□□□□ -2.09
SIN3AQ96ST3 AL627230.6-201ENST00000611129 280 ntBASIC2.01□□□□□ -2.09
SIN3AQ96ST3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.01□□□□□ -2.09
SIN3AQ96ST3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.01□□□□□ -2.09
SIN3AQ96ST3 MIR338-201ENST00000636369 67 ntBASIC2.01□□□□□ -2.09
SIN3AQ96ST3 snoU2-30.2-201ENST00000362805 70 ntBASIC2□□□□□ -2.09
SIN3AQ96ST3 Y_RNA.105-201ENST00000363182 111 ntBASIC2□□□□□ -2.09
SIN3AQ96ST3 Y_RNA.143-201ENST00000363520 106 ntBASIC2□□□□□ -2.09
SIN3AQ96ST3 RNU6-937P-201ENST00000384325 106 ntBASIC2□□□□□ -2.09
SIN3AQ96ST3 AL355796.1-201ENST00000406706 323 ntBASIC2□□□□□ -2.09
SIN3AQ96ST3 RNA5SP501-201ENST00000410990 112 ntBASIC2□□□□□ -2.09
SIN3AQ96ST3 RNU6-1199P-201ENST00000411249 104 ntBASIC2□□□□□ -2.09
SIN3AQ96ST3 AC096920.1-201ENST00000423991 241 ntBASIC2□□□□□ -2.09
SIN3AQ96ST3 AC073910.1-201ENST00000445047 438 ntBASIC2□□□□□ -2.09
SIN3AQ96ST3 SNORD65B-201ENST00000459126 73 ntBASIC2□□□□□ -2.09
SIN3AQ96ST3 RNVU1-2-201ENST00000516326 135 ntBASIC2□□□□□ -2.09
SIN3AQ96ST3 Y_RNA.713-201ENST00000517013 96 ntBASIC2□□□□□ -2.09
SIN3AQ96ST3 RNU6-897P-201ENST00000517135 105 ntBASIC2□□□□□ -2.09
SIN3AQ96ST3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2□□□□□ -2.09
SIN3AQ96ST3 AC005828.6-201ENST00000606610 232 ntBASIC2□□□□□ -2.09
SIN3AQ96ST3 U6.115-201ENST00000636045 103 ntBASIC2□□□□□ -2.09
SIN3AQ96ST3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2□□□□□ -2.09
SIN3AQ96ST3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2□□□□□ -2.09
SIN3AQ96ST3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SIN3AQ96ST3 AC245060.5-201ENST00000610778 3293 ntBASIC2□□□□□ -2.09
SIN3AQ96ST3 RNU6-862P-201ENST00000362804 105 ntBASIC1.99□□□□□ -2.09
SIN3AQ96ST3 Y_RNA.214-201ENST00000364201 112 ntBASIC1.99□□□□□ -2.09
SIN3AQ96ST3 RNU6-1175P-201ENST00000365200 107 ntBASIC1.99□□□□□ -2.09
SIN3AQ96ST3 Y_RNA.462-201ENST00000384268 102 ntBASIC1.99□□□□□ -2.09
SIN3AQ96ST3 ELOCP20-201ENST00000422460 345 ntBASIC1.99□□□□□ -2.09
SIN3AQ96ST3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.99□□□□□ -2.09
SIN3AQ96ST3 MRPS17P9-201ENST00000511924 393 ntBASIC1.99□□□□□ -2.09
SIN3AQ96ST3 AL161670.1-201ENST00000554348 137 ntBASIC1.99□□□□□ -2.09
SIN3AQ96ST3 AC068338.1-201ENST00000565567 176 ntBASIC1.99□□□□□ -2.09
SIN3AQ96ST3 AL360085.1-201ENST00000604713 532 ntBASIC1.99□□□□□ -2.09
SIN3AQ96ST3 AC022441.3-201ENST00000605737 136 ntBASIC1.99□□□□□ -2.09
SIN3AQ96ST3 ZNF209P-201ENST00000593450 2304 ntBASIC1.99□□□□□ -2.09
SIN3AQ96ST3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.98□□□□□ -2.09
SIN3AQ96ST3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
SIN3AQ96ST3 SNORA33-201ENST00000363664 130 ntBASIC1.98□□□□□ -2.09
SIN3AQ96ST3 Y_RNA.183-201ENST00000363882 113 ntBASIC1.98□□□□□ -2.09
SIN3AQ96ST3 SNORD115-30-201ENST00000364117 82 ntBASIC1.98□□□□□ -2.09
SIN3AQ96ST3 Y_RNA.210-201ENST00000364161 110 ntBASIC1.98□□□□□ -2.09
SIN3AQ96ST3 Y_RNA.243-201ENST00000364481 109 ntBASIC1.98□□□□□ -2.09
SIN3AQ96ST3 Y_RNA.276-201ENST00000364732 109 ntBASIC1.98□□□□□ -2.09
SIN3AQ96ST3 SNORA72.2-201ENST00000365028 127 ntBASIC1.98□□□□□ -2.09
SIN3AQ96ST3 Y_RNA.361-201ENST00000365515 120 ntBASIC1.98□□□□□ -2.09
SIN3AQ96ST3 Y_RNA.446-201ENST00000384178 104 ntBASIC1.98□□□□□ -2.09
SIN3AQ96ST3 SNORA20B-201ENST00000384220 132 ntBASIC1.98□□□□□ -2.09
SIN3AQ96ST3 SNORD63-201ENST00000384262 68 ntBASIC1.98□□□□□ -2.09
SIN3AQ96ST3 RNU6-417P-201ENST00000384712 107 ntBASIC1.98□□□□□ -2.09
SIN3AQ96ST3 SNORA48.1-201ENST00000390879 135 ntBASIC1.98□□□□□ -2.09
SIN3AQ96ST3 RNU2-54P-201ENST00000410299 190 ntBASIC1.98□□□□□ -2.09
SIN3AQ96ST3 RNU6-121P-201ENST00000410525 99 ntBASIC1.98□□□□□ -2.09
SIN3AQ96ST3 Y_RNA.720-201ENST00000517166 92 ntBASIC1.98□□□□□ -2.09
SIN3AQ96ST3 MIR4300-201ENST00000581016 96 ntBASIC1.98□□□□□ -2.09
SIN3AQ96ST3 AC007229.1-201ENST00000590455 412 ntBASIC1.98□□□□□ -2.09
SIN3AQ96ST3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SIN3AQ96ST3 Y_RNA.26-201ENST00000362539 101 ntBASIC1.97□□□□□ -2.09
SIN3AQ96ST3 RNU6-1266P-201ENST00000362794 105 ntBASIC1.97□□□□□ -2.09
SIN3AQ96ST3 RPL21P1-201ENST00000399532 476 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms