Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC108747.1-201ENST00000609508 535 ntBASIC-1.5□□□□□ -2.65
CFAP54Q96N23 MTND4P21-201ENST00000453886 1357 ntBASIC-1.5□□□□□ -2.65
CFAP54Q96N23 RNU6-704P-201ENST00000364162 103 ntBASIC-1.51□□□□□ -2.65
CFAP54Q96N23 RNU6-169P-201ENST00000365336 107 ntBASIC-1.51□□□□□ -2.65
CFAP54Q96N23 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.51□□□□□ -2.65
CFAP54Q96N23 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.51□□□□□ -2.65
CFAP54Q96N23 GMFBP1-201ENST00000467831 427 ntBASIC-1.51□□□□□ -2.65
CFAP54Q96N23 BNIP3P30-201ENST00000601184 574 ntBASIC-1.51□□□□□ -2.65
CFAP54Q96N23 SNORA33-201ENST00000363664 130 ntBASIC-1.51□□□□□ -2.65
CFAP54Q96N23 RNU6-535P-201ENST00000384722 107 ntBASIC-1.51□□□□□ -2.65
CFAP54Q96N23 MIR300-201ENST00000401138 83 ntBASIC-1.51□□□□□ -2.65
CFAP54Q96N23 AC074085.1-201ENST00000413598 418 ntBASIC-1.51□□□□□ -2.65
CFAP54Q96N23 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.51□□□□□ -2.65
CFAP54Q96N23 BTF3L4P3-201ENST00000418879 476 ntBASIC-1.51□□□□□ -2.65
CFAP54Q96N23 PPP1R11P2-201ENST00000423543 382 ntBASIC-1.51□□□□□ -2.65
CFAP54Q96N23 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-1.51□□□□□ -2.65
CFAP54Q96N23 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-1.51□□□□□ -2.65
CFAP54Q96N23 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.51□□□□□ -2.65
CFAP54Q96N23 AL512286.1-201ENST00000439244 400 ntBASIC-1.51□□□□□ -2.65
CFAP54Q96N23 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.51□□□□□ -2.65
CFAP54Q96N23 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-1.51□□□□□ -2.65
CFAP54Q96N23 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.52□□□□□ -2.65
CFAP54Q96N23 MT-TN-201ENST00000387400 73 ntBASIC-1.52□□□□□ -2.65
CFAP54Q96N23 SNORA12.2-201ENST00000391040 156 ntBASIC-1.52□□□□□ -2.65
CFAP54Q96N23 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-1.52□□□□□ -2.65
CFAP54Q96N23 AF186996.7-201ENST00000492781 209 ntBASIC-1.52□□□□□ -2.65
CFAP54Q96N23 RNU6-202P-201ENST00000515998 96 ntBASIC-1.52□□□□□ -2.65
CFAP54Q96N23 RNA5SP47-201ENST00000517230 109 ntBASIC-1.52□□□□□ -2.65
CFAP54Q96N23 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC-1.52□□□□□ -2.65
CFAP54Q96N23 AL136221.1-201ENST00000621449 509 ntBASIC-1.52□□□□□ -2.65
CFAP54Q96N23 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.52□□□□□ -2.65
CFAP54Q96N23 RNY3P9-201ENST00000384727 106 ntBASIC-1.52□□□□□ -2.65
CFAP54Q96N23 RNU2-47P-201ENST00000410649 186 ntBASIC-1.52□□□□□ -2.65
CFAP54Q96N23 RPS29P24-201ENST00000486345 171 ntBASIC-1.52□□□□□ -2.65
CFAP54Q96N23 PRDX4P1-201ENST00000507189 574 ntBASIC-1.52□□□□□ -2.65
CFAP54Q96N23 AC011352.1-201ENST00000512300 793 ntBASIC-1.52□□□□□ -2.65
CFAP54Q96N23 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.52□□□□□ -2.65
CFAP54Q96N23 MIR4756-201ENST00000577874 78 ntBASIC-1.52□□□□□ -2.65
CFAP54Q96N23 AC091965.4-201ENST00000607691 587 ntBASIC-1.52□□□□□ -2.65
CFAP54Q96N23 MIR6818-201ENST00000621576 65 ntBASIC-1.52□□□□□ -2.65
CFAP54Q96N23 RNU6-511P-201ENST00000363496 107 ntBASIC-1.53□□□□□ -2.65
CFAP54Q96N23 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.53□□□□□ -2.65
CFAP54Q96N23 RNU6-444P-201ENST00000383988 108 ntBASIC-1.53□□□□□ -2.65
CFAP54Q96N23 MIR29B1-201ENST00000385015 81 ntBASIC-1.53□□□□□ -2.65
CFAP54Q96N23 AC243428.1-201ENST00000421099 264 ntBASIC-1.53□□□□□ -2.65
CFAP54Q96N23 USP9YP12-201ENST00000450481 570 ntBASIC-1.53□□□□□ -2.65
CFAP54Q96N23 RNU5F-4P-201ENST00000516581 114 ntBASIC-1.53□□□□□ -2.65
CFAP54Q96N23 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.53□□□□□ -2.65
CFAP54Q96N23 SNORD45.3-201ENST00000363836 72 ntBASIC-1.53□□□□□ -2.65
CFAP54Q96N23 RNU6-621P-201ENST00000364752 109 ntBASIC-1.53□□□□□ -2.65
CFAP54Q96N23 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.53□□□□□ -2.65
CFAP54Q96N23 RNU6-98P-201ENST00000384173 107 ntBASIC-1.53□□□□□ -2.65
CFAP54Q96N23 AC106883.1-201ENST00000418805 562 ntBASIC-1.53□□□□□ -2.65
CFAP54Q96N23 RNU7-59P-201ENST00000459101 61 ntBASIC-1.53□□□□□ -2.65
CFAP54Q96N23 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-1.53□□□□□ -2.65
CFAP54Q96N23 AC087683.2-201ENST00000611384 326 ntBASIC-1.53□□□□□ -2.65
CFAP54Q96N23 AC092656.1-203ENST00000624134 423 ntBASIC-1.53□□□□□ -2.65
CFAP54Q96N23 RNU6-900P-201ENST00000384498 102 ntBASIC-1.53□□□□□ -2.66
CFAP54Q96N23 MIR649-201ENST00000384843 97 ntBASIC-1.53□□□□□ -2.66
CFAP54Q96N23 MIR518F-201ENST00000384973 87 ntBASIC-1.53□□□□□ -2.66
CFAP54Q96N23 DPRXP1-201ENST00000426312 460 ntBASIC-1.53□□□□□ -2.66
CFAP54Q96N23 AC013262.1-201ENST00000426710 252 ntBASIC-1.53□□□□□ -2.66
CFAP54Q96N23 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.53□□□□□ -2.66
CFAP54Q96N23 MIR466-201ENST00000580653 84 ntBASIC-1.53□□□□□ -2.66
CFAP54Q96N23 AC253576.2-201ENST00000618815 580 ntBASIC-1.53□□□□□ -2.66
CFAP54Q96N23 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-1.54□□□□□ -2.66
CFAP54Q96N23 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.54□□□□□ -2.66
CFAP54Q96N23 AC245047.3-201ENST00000429428 127 ntBASIC-1.54□□□□□ -2.66
CFAP54Q96N23 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-1.54□□□□□ -2.66
CFAP54Q96N23 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-1.54□□□□□ -2.66
CFAP54Q96N23 RNU7-156P-201ENST00000517214 74 ntBASIC-1.54□□□□□ -2.66
CFAP54Q96N23 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-1.54□□□□□ -2.66
CFAP54Q96N23 AL356094.1-201ENST00000624663 1212 ntBASIC-1.54□□□□□ -2.66
CFAP54Q96N23 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.54□□□□□ -2.66
CFAP54Q96N23 RNU6-784P-201ENST00000384330 106 ntBASIC-1.54□□□□□ -2.66
CFAP54Q96N23 SNORA26.5-201ENST00000391215 123 ntBASIC-1.54□□□□□ -2.66
CFAP54Q96N23 TRIM60P5Y-201ENST00000413946 574 ntBASIC-1.54□□□□□ -2.66
CFAP54Q96N23 AC079395.1-201ENST00000510981 262 ntBASIC-1.54□□□□□ -2.66
CFAP54Q96N23 RNU7-43P-201ENST00000516554 64 ntBASIC-1.54□□□□□ -2.66
CFAP54Q96N23 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-1.54□□□□□ -2.66
CFAP54Q96N23 AC124016.2-201ENST00000610058 665 ntBASIC-1.54□□□□□ -2.66
CFAP54Q96N23 RNU6-512P-201ENST00000364438 103 ntBASIC-1.55□□□□□ -2.66
CFAP54Q96N23 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-1.55□□□□□ -2.66
CFAP54Q96N23 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-1.55□□□□□ -2.66
CFAP54Q96N23 AC064872.1-201ENST00000604823 1072 ntBASIC-1.55□□□□□ -2.66
CFAP54Q96N23 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.55□□□□□ -2.66
CFAP54Q96N23 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.55□□□□□ -2.66
CFAP54Q96N23 RNU6-921P-201ENST00000384361 107 ntBASIC-1.55□□□□□ -2.66
CFAP54Q96N23 U8.17-201ENST00000391292 132 ntBASIC-1.55□□□□□ -2.66
CFAP54Q96N23 MTATP6P17-201ENST00000431030 672 ntBASIC-1.55□□□□□ -2.66
CFAP54Q96N23 AC023510.2-201ENST00000622162 746 ntBASIC-1.55□□□□□ -2.66
CFAP54Q96N23 RNU6-212P-201ENST00000362642 104 ntBASIC-1.55□□□□□ -2.66
CFAP54Q96N23 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-1.55□□□□□ -2.66
CFAP54Q96N23 RNU2-34P-201ENST00000516534 121 ntBASIC-1.55□□□□□ -2.66
CFAP54Q96N23 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.55□□□□□ -2.66
CFAP54Q96N23 HIGD1AP6-201ENST00000521833 279 ntBASIC-1.55□□□□□ -2.66
CFAP54Q96N23 OR4H6P-202ENST00000603819 340 ntBASIC-1.55□□□□□ -2.66
CFAP54Q96N23 AP003400.6-201ENST00000624698 740 ntBASIC-1.55□□□□□ -2.66
CFAP54Q96N23 RNU6-441P-201ENST00000384545 106 ntBASIC-1.56□□□□□ -2.66
CFAP54Q96N23 MIR15B-201ENST00000385045 98 ntBASIC-1.56□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms