Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AC125232.2-201ENST00000592457 143 ntBASIC0.77□□□□□ -2.29
PKNOX2Q96KN3 AC005592.1-201ENST00000566527 1640 ntBASIC0.77□□□□□ -2.29
PKNOX2Q96KN3 MTND5P16-201ENST00000460269 1703 ntBASIC0.77□□□□□ -2.29
PKNOX2Q96KN3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
PKNOX2Q96KN3 Y_RNA.48-201ENST00000362710 103 ntBASIC0.76□□□□□ -2.29
PKNOX2Q96KN3 Y_RNA.124-201ENST00000363339 93 ntBASIC0.76□□□□□ -2.29
PKNOX2Q96KN3 RNU4-24P-201ENST00000364565 139 ntBASIC0.76□□□□□ -2.29
PKNOX2Q96KN3 RNU4-75P-201ENST00000364621 146 ntBASIC0.76□□□□□ -2.29
PKNOX2Q96KN3 RNU6-407P-201ENST00000365280 104 ntBASIC0.76□□□□□ -2.29
PKNOX2Q96KN3 SNORA80D-201ENST00000384488 135 ntBASIC0.76□□□□□ -2.29
PKNOX2Q96KN3 RNA5SP482-201ENST00000391269 118 ntBASIC0.76□□□□□ -2.29
PKNOX2Q96KN3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.76□□□□□ -2.29
PKNOX2Q96KN3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.76□□□□□ -2.29
PKNOX2Q96KN3 UQCRBP2-201ENST00000447827 297 ntBASIC0.76□□□□□ -2.29
PKNOX2Q96KN3 RPL39P39-201ENST00000455840 151 ntBASIC0.76□□□□□ -2.29
PKNOX2Q96KN3 SNORD124-201ENST00000459577 104 ntBASIC0.76□□□□□ -2.29
PKNOX2Q96KN3 COX6CP6-201ENST00000490840 228 ntBASIC0.76□□□□□ -2.29
PKNOX2Q96KN3 HMGN1P7-201ENST00000491722 313 ntBASIC0.76□□□□□ -2.29
PKNOX2Q96KN3 MIR5701-3-201ENST00000578890 82 ntBASIC0.76□□□□□ -2.29
PKNOX2Q96KN3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.76□□□□□ -2.29
PKNOX2Q96KN3 MIR5701-1-201ENST00000585138 82 ntBASIC0.76□□□□□ -2.29
PKNOX2Q96KN3 MIR5701-2-201ENST00000615634 82 ntBASIC0.76□□□□□ -2.29
PKNOX2Q96KN3 AC015540.1-201ENST00000615828 501 ntBASIC0.76□□□□□ -2.29
PKNOX2Q96KN3 AC100810.6-201ENST00000638068 285 ntBASIC0.76□□□□□ -2.29
PKNOX2Q96KN3 AC073544.1-201ENST00000600110 1595 ntBASIC0.75□□□□□ -2.29
PKNOX2Q96KN3 MIRLET7C-201ENST00000362160 84 ntBASIC0.75□□□□□ -2.29
PKNOX2Q96KN3 Y_RNA.157-201ENST00000363638 102 ntBASIC0.75□□□□□ -2.29
PKNOX2Q96KN3 RNU6-1145P-201ENST00000384246 107 ntBASIC0.75□□□□□ -2.29
PKNOX2Q96KN3 RNU6-376P-201ENST00000384731 106 ntBASIC0.75□□□□□ -2.29
PKNOX2Q96KN3 MIR190B-201ENST00000401119 79 ntBASIC0.75□□□□□ -2.29
PKNOX2Q96KN3 RNA5SP118-201ENST00000410385 109 ntBASIC0.75□□□□□ -2.29
PKNOX2Q96KN3 RPS3AP1-201ENST00000413190 320 ntBASIC0.75□□□□□ -2.29
PKNOX2Q96KN3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.75□□□□□ -2.29
PKNOX2Q96KN3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.75□□□□□ -2.29
PKNOX2Q96KN3 RPS26P48-201ENST00000491713 339 ntBASIC0.75□□□□□ -2.29
PKNOX2Q96KN3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.75□□□□□ -2.29
PKNOX2Q96KN3 AP002001.1-203ENST00000534002 267 ntBASIC0.75□□□□□ -2.29
PKNOX2Q96KN3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.75□□□□□ -2.29
PKNOX2Q96KN3 AL117336.2-201ENST00000602435 335 ntBASIC0.75□□□□□ -2.29
PKNOX2Q96KN3 AC104465.1-201ENST00000611365 139 ntBASIC0.75□□□□□ -2.29
PKNOX2Q96KN3 MIR6128-201ENST00000615528 109 ntBASIC0.75□□□□□ -2.29
PKNOX2Q96KN3 MIR3662-201ENST00000637030 95 ntBASIC0.75□□□□□ -2.29
PKNOX2Q96KN3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
PKNOX2Q96KN3 MIR410-201ENST00000362222 80 ntBASIC0.74□□□□□ -2.29
PKNOX2Q96KN3 Y_RNA.89-201ENST00000363031 102 ntBASIC0.74□□□□□ -2.29
PKNOX2Q96KN3 SNORD114-27-201ENST00000363766 70 ntBASIC0.74□□□□□ -2.29
PKNOX2Q96KN3 Y_RNA.301-201ENST00000364990 103 ntBASIC0.74□□□□□ -2.29
PKNOX2Q96KN3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
PKNOX2Q96KN3 RNU5A-5P-201ENST00000411054 116 ntBASIC0.74□□□□□ -2.29
PKNOX2Q96KN3 DLGAP5P1-201ENST00000430307 464 ntBASIC0.74□□□□□ -2.29
PKNOX2Q96KN3 AL137792.2-201ENST00000443484 235 ntBASIC0.74□□□□□ -2.29
PKNOX2Q96KN3 MTND2P22-201ENST00000444325 1033 ntBASIC0.74□□□□□ -2.29
PKNOX2Q96KN3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.74□□□□□ -2.29
PKNOX2Q96KN3 AC074133.1-201ENST00000515696 183 ntBASIC0.74□□□□□ -2.29
PKNOX2Q96KN3 RNU6-1278P-201ENST00000516130 107 ntBASIC0.74□□□□□ -2.29
PKNOX2Q96KN3 AL357075.2-201ENST00000614906 189 ntBASIC0.74□□□□□ -2.29
PKNOX2Q96KN3 AC104260.1-201ENST00000616660 539 ntBASIC0.74□□□□□ -2.29
PKNOX2Q96KN3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.74□□□□□ -2.29
PKNOX2Q96KN3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.74□□□□□ -2.29
PKNOX2Q96KN3 Y_RNA.364-201ENST00000365532 101 ntBASIC0.73□□□□□ -2.29
PKNOX2Q96KN3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.73□□□□□ -2.29
PKNOX2Q96KN3 RNU6-969P-201ENST00000383900 105 ntBASIC0.73□□□□□ -2.29
PKNOX2Q96KN3 RNU6-1080P-201ENST00000383982 107 ntBASIC0.73□□□□□ -2.29
PKNOX2Q96KN3 Y_RNA.554-201ENST00000384672 102 ntBASIC0.73□□□□□ -2.29
PKNOX2Q96KN3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
PKNOX2Q96KN3 AL139396.1-201ENST00000421137 167 ntBASIC0.73□□□□□ -2.29
PKNOX2Q96KN3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.73□□□□□ -2.29
PKNOX2Q96KN3 AC004941.2-201ENST00000427009 228 ntBASIC0.73□□□□□ -2.29
PKNOX2Q96KN3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.73□□□□□ -2.29
PKNOX2Q96KN3 RNU6-1291P-201ENST00000516591 104 ntBASIC0.73□□□□□ -2.29
PKNOX2Q96KN3 AL358944.1-201ENST00000528537 144 ntBASIC0.73□□□□□ -2.29
PKNOX2Q96KN3 U6.115-201ENST00000636045 103 ntBASIC0.73□□□□□ -2.29
PKNOX2Q96KN3 SNORA25.9-201ENST00000365087 128 ntBASIC0.72□□□□□ -2.29
PKNOX2Q96KN3 RNU6-117P-201ENST00000365415 107 ntBASIC0.72□□□□□ -2.29
PKNOX2Q96KN3 Y_RNA.450-201ENST00000384198 113 ntBASIC0.72□□□□□ -2.29
PKNOX2Q96KN3 Y_RNA.573-201ENST00000384763 105 ntBASIC0.72□□□□□ -2.29
PKNOX2Q96KN3 AC104332.1-201ENST00000440471 797 ntBASIC0.72□□□□□ -2.29
PKNOX2Q96KN3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.72□□□□□ -2.29
PKNOX2Q96KN3 PCNPP5-201ENST00000452246 481 ntBASIC0.72□□□□□ -2.29
PKNOX2Q96KN3 LINC01399-202ENST00000458450 244 ntBASIC0.72□□□□□ -2.29
PKNOX2Q96KN3 AL049830.1-201ENST00000468034 425 ntBASIC0.72□□□□□ -2.29
PKNOX2Q96KN3 RNU6-113P-201ENST00000516653 101 ntBASIC0.72□□□□□ -2.29
PKNOX2Q96KN3 AP003484.1-201ENST00000530974 250 ntBASIC0.72□□□□□ -2.29
PKNOX2Q96KN3 AC018448.1-201ENST00000552843 316 ntBASIC0.72□□□□□ -2.29
PKNOX2Q96KN3 MIR4790-201ENST00000577799 79 ntBASIC0.72□□□□□ -2.29
PKNOX2Q96KN3 PRELID3BP2-201ENST00000605362 201 ntBASIC0.72□□□□□ -2.29
PKNOX2Q96KN3 AC005828.6-201ENST00000606610 232 ntBASIC0.72□□□□□ -2.29
PKNOX2Q96KN3 AC005014.2-201ENST00000607795 599 ntBASIC0.72□□□□□ -2.29
PKNOX2Q96KN3 AC004832.4-201ENST00000608952 331 ntBASIC0.72□□□□□ -2.29
PKNOX2Q96KN3 AC127459.3-201ENST00000624328 466 ntBASIC0.72□□□□□ -2.29
PKNOX2Q96KN3 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.72□□□□□ -2.29
PKNOX2Q96KN3 Y_RNA.498-201ENST00000384460 102 ntBASIC0.71□□□□□ -2.3
PKNOX2Q96KN3 Y_RNA.557-201ENST00000384680 107 ntBASIC0.71□□□□□ -2.3
PKNOX2Q96KN3 MIR520G-201ENST00000385064 90 ntBASIC0.71□□□□□ -2.3
PKNOX2Q96KN3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.71□□□□□ -2.3
PKNOX2Q96KN3 RNU6-700P-201ENST00000391043 107 ntBASIC0.71□□□□□ -2.3
PKNOX2Q96KN3 MIR873-201ENST00000401120 77 ntBASIC0.71□□□□□ -2.3
PKNOX2Q96KN3 Z98949.2-201ENST00000440996 144 ntBASIC0.71□□□□□ -2.3
PKNOX2Q96KN3 UBE2V1P7-201ENST00000446395 340 ntBASIC0.71□□□□□ -2.3
PKNOX2Q96KN3 RNU7-21P-201ENST00000459430 62 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms