Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC109810.1-201ENST00000534066 224 ntBASIC3.08□□□□□ -1.92
DDX11Q96FC9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.08□□□□□ -1.92
DDX11Q96FC9 DNAJC19P2-201ENST00000593340 302 ntBASIC3.08□□□□□ -1.92
DDX11Q96FC9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.08□□□□□ -1.92
DDX11Q96FC9 MIR7157-201ENST00000635801 60 ntBASIC3.08□□□□□ -1.92
DDX11Q96FC9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
DDX11Q96FC9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
DDX11Q96FC9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.08□□□□□ -1.92
DDX11Q96FC9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.08□□□□□ -1.92
DDX11Q96FC9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
DDX11Q96FC9 RNU6-461P-201ENST00000364195 107 ntBASIC3.07□□□□□ -1.92
DDX11Q96FC9 RNU6-376P-201ENST00000384731 106 ntBASIC3.07□□□□□ -1.92
DDX11Q96FC9 MIR586-201ENST00000385035 97 ntBASIC3.07□□□□□ -1.92
DDX11Q96FC9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.07□□□□□ -1.92
DDX11Q96FC9 RNU7-141P-201ENST00000459304 62 ntBASIC3.07□□□□□ -1.92
DDX11Q96FC9 HMGN2P9-201ENST00000476875 229 ntBASIC3.07□□□□□ -1.92
DDX11Q96FC9 TRBV12-1-201ENST00000479785 344 ntBASIC3.07□□□□□ -1.92
DDX11Q96FC9 SRIP1-201ENST00000489235 288 ntBASIC3.07□□□□□ -1.92
DDX11Q96FC9 MIR3117-201ENST00000584034 78 ntBASIC3.07□□□□□ -1.92
DDX11Q96FC9 MIR4765-201ENST00000585007 77 ntBASIC3.07□□□□□ -1.92
DDX11Q96FC9 RPL30P11-203ENST00000598995 310 ntBASIC3.07□□□□□ -1.92
DDX11Q96FC9 AL391903.3-201ENST00000612158 163 ntBASIC3.07□□□□□ -1.92
DDX11Q96FC9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
DDX11Q96FC9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
DDX11Q96FC9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
DDX11Q96FC9 Y_RNA.24-201ENST00000362508 103 ntBASIC3.06□□□□□ -1.92
DDX11Q96FC9 SNORD114-7-201ENST00000362520 77 ntBASIC3.06□□□□□ -1.92
DDX11Q96FC9 RNU6-944P-201ENST00000364023 107 ntBASIC3.06□□□□□ -1.92
DDX11Q96FC9 RNU6-1305P-201ENST00000364353 104 ntBASIC3.06□□□□□ -1.92
DDX11Q96FC9 SNORA40-201ENST00000388090 126 ntBASIC3.06□□□□□ -1.92
DDX11Q96FC9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
DDX11Q96FC9 Y_RNA.629-201ENST00000411368 105 ntBASIC3.06□□□□□ -1.92
DDX11Q96FC9 AC097463.2-201ENST00000421074 142 ntBASIC3.06□□□□□ -1.92
DDX11Q96FC9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.06□□□□□ -1.92
DDX11Q96FC9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.06□□□□□ -1.92
DDX11Q96FC9 AC091544.4-201ENST00000555268 342 ntBASIC3.06□□□□□ -1.92
DDX11Q96FC9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.06□□□□□ -1.92
DDX11Q96FC9 AC025754.2-201ENST00000606491 432 ntBASIC3.06□□□□□ -1.92
DDX11Q96FC9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
DDX11Q96FC9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
DDX11Q96FC9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
DDX11Q96FC9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.05□□□□□ -1.92
DDX11Q96FC9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.05□□□□□ -1.92
DDX11Q96FC9 RNU4-11P-201ENST00000365287 132 ntBASIC3.05□□□□□ -1.92
DDX11Q96FC9 AL355796.1-201ENST00000406706 323 ntBASIC3.05□□□□□ -1.92
DDX11Q96FC9 MIR1185-2-201ENST00000408687 86 ntBASIC3.05□□□□□ -1.92
DDX11Q96FC9 MTND4LP9-201ENST00000427694 174 ntBASIC3.05□□□□□ -1.92
DDX11Q96FC9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.05□□□□□ -1.92
DDX11Q96FC9 AC008267.6-201ENST00000441664 139 ntBASIC3.05□□□□□ -1.92
DDX11Q96FC9 AC074290.1-201ENST00000448883 135 ntBASIC3.05□□□□□ -1.92
DDX11Q96FC9 ATP5EP1-201ENST00000510257 156 ntBASIC3.05□□□□□ -1.92
DDX11Q96FC9 RNA5SP112-201ENST00000515937 99 ntBASIC3.05□□□□□ -1.92
DDX11Q96FC9 SNORA70.12-201ENST00000516084 153 ntBASIC3.05□□□□□ -1.92
DDX11Q96FC9 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.05□□□□□ -1.92
DDX11Q96FC9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.05□□□□□ -1.92
DDX11Q96FC9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.05□□□□□ -1.92
DDX11Q96FC9 AL449363.1-201ENST00000617815 186 ntBASIC3.05□□□□□ -1.92
DDX11Q96FC9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.05□□□□□ -1.92
DDX11Q96FC9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
DDX11Q96FC9 MIR3658-201ENST00000636291 56 ntBASIC3.05□□□□□ -1.92
DDX11Q96FC9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.05□□□□□ -1.92
DDX11Q96FC9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.05□□□□□ -1.92
DDX11Q96FC9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.04□□□□□ -1.92
DDX11Q96FC9 RNU6-1205P-201ENST00000363625 106 ntBASIC3.04□□□□□ -1.92
DDX11Q96FC9 RNA5SP205-201ENST00000364653 136 ntBASIC3.04□□□□□ -1.92
DDX11Q96FC9 RNU6-969P-201ENST00000383900 105 ntBASIC3.04□□□□□ -1.92
DDX11Q96FC9 RNU6-144P-201ENST00000383951 107 ntBASIC3.04□□□□□ -1.92
DDX11Q96FC9 RNU6-1274P-201ENST00000384557 107 ntBASIC3.04□□□□□ -1.92
DDX11Q96FC9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
DDX11Q96FC9 RNU6-1328P-201ENST00000410938 106 ntBASIC3.04□□□□□ -1.92
DDX11Q96FC9 RPL30P13-201ENST00000418873 348 ntBASIC3.04□□□□□ -1.92
DDX11Q96FC9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.04□□□□□ -1.92
DDX11Q96FC9 AL445687.1-201ENST00000439946 251 ntBASIC3.04□□□□□ -1.92
DDX11Q96FC9 AC008413.1-201ENST00000511864 177 ntBASIC3.04□□□□□ -1.92
DDX11Q96FC9 SNORA31.15-201ENST00000516771 132 ntBASIC3.04□□□□□ -1.92
DDX11Q96FC9 AC012640.5-201ENST00000623897 319 ntBASIC3.04□□□□□ -1.92
DDX11Q96FC9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.03□□□□□ -1.92
DDX11Q96FC9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.03□□□□□ -1.92
DDX11Q96FC9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
DDX11Q96FC9 RNU6-486P-201ENST00000363116 107 ntBASIC3.03□□□□□ -1.92
DDX11Q96FC9 Y_RNA.337-201ENST00000365312 102 ntBASIC3.03□□□□□ -1.92
DDX11Q96FC9 MICF-203ENST00000432679 129 ntBASIC3.03□□□□□ -1.92
DDX11Q96FC9 AL137159.1-201ENST00000452808 512 ntBASIC3.03□□□□□ -1.92
DDX11Q96FC9 RNU6-1007P-201ENST00000516586 107 ntBASIC3.03□□□□□ -1.92
DDX11Q96FC9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.03□□□□□ -1.92
DDX11Q96FC9 AL356280.1-201ENST00000603614 379 ntBASIC3.03□□□□□ -1.92
DDX11Q96FC9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
DDX11Q96FC9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.02□□□□□ -1.93
DDX11Q96FC9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
DDX11Q96FC9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
DDX11Q96FC9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
DDX11Q96FC9 AL159152.1-201ENST00000635019 2587 ntBASIC3.02□□□□□ -1.93
DDX11Q96FC9 AC080128.1-201ENST00000474389 1917 ntBASIC3.02□□□□□ -1.93
DDX11Q96FC9 Y_RNA.218-201ENST00000364218 104 ntBASIC3.02□□□□□ -1.93
DDX11Q96FC9 Y_RNA.261-201ENST00000364631 102 ntBASIC3.02□□□□□ -1.93
DDX11Q96FC9 SNORD116-13-201ENST00000384408 92 ntBASIC3.02□□□□□ -1.93
DDX11Q96FC9 MT-TT-201ENST00000387460 66 ntBASIC3.02□□□□□ -1.93
DDX11Q96FC9 MIR513C-201ENST00000401352 84 ntBASIC3.02□□□□□ -1.93
DDX11Q96FC9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.02□□□□□ -1.93
DDX11Q96FC9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms