Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNU6-801P-201ENST00000364087 105 ntBASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 SNORA67.1-201ENST00000364749 141 ntBASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 Y_RNA.310-201ENST00000365063 113 ntBASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 RNY4P28-201ENST00000365281 93 ntBASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 RNU1-148P-201ENST00000384472 162 ntBASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 RNU11-5P-201ENST00000391216 129 ntBASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 HSPE1P21-201ENST00000438283 308 ntBASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 AL353689.1-201ENST00000438895 199 ntBASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 Z98949.2-201ENST00000440996 144 ntBASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 AL138752.1-201ENST00000452964 351 ntBASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 AC010409.1-201ENST00000487382 476 ntBASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 RPS29P21-201ENST00000496272 170 ntBASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 RN7SL636P-201ENST00000497504 294 ntBASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 RNU6-138P-201ENST00000515952 107 ntBASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 RNU6-1041P-201ENST00000516254 102 ntBASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 RNU1-104P-201ENST00000517280 175 ntBASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 AC130289.1-201ENST00000577321 73 ntBASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CTHRC1Q96CG8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 MIR21-201ENST00000362134 72 ntBASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 RNU6-899P-201ENST00000363947 107 ntBASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 SNORD114-6-201ENST00000364393 72 ntBASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 Y_RNA.297-201ENST00000364950 91 ntBASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 RNA5SP126-201ENST00000365092 109 ntBASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 RNU6-763P-201ENST00000390865 106 ntBASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 Y_RNA.626-201ENST00000411288 95 ntBASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 Y_RNA.637-201ENST00000459424 114 ntBASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 AC026436.1-201ENST00000510537 270 ntBASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 SNORD116-28-201ENST00000516123 91 ntBASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 RNU6-1278P-201ENST00000516130 107 ntBASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 RNA5SP82-201ENST00000516707 92 ntBASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 MIR4438-201ENST00000585271 93 ntBASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CTHRC1Q96CG8 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CTHRC1Q96CG8 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CTHRC1Q96CG8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CTHRC1Q96CG8 snoU2-30.2-201ENST00000362805 70 ntBASIC2.22□□□□□ -2.05
CTHRC1Q96CG8 SNORD115-3-201ENST00000363100 82 ntBASIC2.22□□□□□ -2.05
CTHRC1Q96CG8 SNORA72.4-201ENST00000384174 132 ntBASIC2.22□□□□□ -2.05
CTHRC1Q96CG8 RNU6-417P-201ENST00000384712 107 ntBASIC2.22□□□□□ -2.05
CTHRC1Q96CG8 MTND5P15-201ENST00000434246 349 ntBASIC2.22□□□□□ -2.05
CTHRC1Q96CG8 RPS20P10-201ENST00000451209 253 ntBASIC2.22□□□□□ -2.05
CTHRC1Q96CG8 ATP5J2P3-201ENST00000451550 258 ntBASIC2.22□□□□□ -2.05
CTHRC1Q96CG8 RPL36AP21-201ENST00000490372 323 ntBASIC2.22□□□□□ -2.05
CTHRC1Q96CG8 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.22□□□□□ -2.05
CTHRC1Q96CG8 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.22□□□□□ -2.05
CTHRC1Q96CG8 SNORA31.11-201ENST00000516528 139 ntBASIC2.22□□□□□ -2.05
CTHRC1Q96CG8 RNA5SP137-201ENST00000516833 135 ntBASIC2.22□□□□□ -2.05
CTHRC1Q96CG8 RNU6-182P-201ENST00000516970 105 ntBASIC2.22□□□□□ -2.05
CTHRC1Q96CG8 AL031274.2-201ENST00000599419 203 ntBASIC2.22□□□□□ -2.05
CTHRC1Q96CG8 U6.73-201ENST00000619194 103 ntBASIC2.22□□□□□ -2.05
CTHRC1Q96CG8 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.22□□□□□ -2.05
CTHRC1Q96CG8 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CTHRC1Q96CG8 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CTHRC1Q96CG8 AL356292.1-201ENST00000283110 373 ntBASIC2.21□□□□□ -2.06
CTHRC1Q96CG8 Y_RNA.29-201ENST00000362570 113 ntBASIC2.21□□□□□ -2.06
CTHRC1Q96CG8 RNU6-23P-201ENST00000363283 107 ntBASIC2.21□□□□□ -2.06
CTHRC1Q96CG8 RNU4-13P-201ENST00000364019 141 ntBASIC2.21□□□□□ -2.06
CTHRC1Q96CG8 Y_RNA.262-201ENST00000364641 102 ntBASIC2.21□□□□□ -2.06
CTHRC1Q96CG8 MTCO2P33-201ENST00000402100 465 ntBASIC2.21□□□□□ -2.06
CTHRC1Q96CG8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.21□□□□□ -2.06
CTHRC1Q96CG8 U8.19-201ENST00000459095 133 ntBASIC2.21□□□□□ -2.06
CTHRC1Q96CG8 AC234781.5-201ENST00000508429 271 ntBASIC2.21□□□□□ -2.06
CTHRC1Q96CG8 RNU7-172P-201ENST00000517125 64 ntBASIC2.21□□□□□ -2.06
CTHRC1Q96CG8 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.21□□□□□ -2.06
CTHRC1Q96CG8 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.21□□□□□ -2.06
CTHRC1Q96CG8 MIR5692C2-201ENST00000577959 77 ntBASIC2.21□□□□□ -2.06
CTHRC1Q96CG8 MIR5007-201ENST00000583098 95 ntBASIC2.21□□□□□ -2.06
CTHRC1Q96CG8 AC007229.1-201ENST00000590455 412 ntBASIC2.21□□□□□ -2.06
CTHRC1Q96CG8 Z83818.1-201ENST00000603584 150 ntBASIC2.21□□□□□ -2.06
CTHRC1Q96CG8 AC005972.2-201ENST00000604690 348 ntBASIC2.21□□□□□ -2.06
CTHRC1Q96CG8 AC013791.1-201ENST00000616619 62 ntBASIC2.21□□□□□ -2.06
CTHRC1Q96CG8 Z82195.2-201ENST00000612348 18351 ntBASIC2.21□□□□□ -2.06
CTHRC1Q96CG8 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 MIR411-201ENST00000362239 96 ntBASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 RNA5SP493-201ENST00000364115 91 ntBASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 RNU6-1164P-201ENST00000364428 107 ntBASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 RNU6-301P-201ENST00000384277 107 ntBASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 Y_RNA.785-201ENST00000384290 109 ntBASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 SNORA26.5-201ENST00000391215 123 ntBASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 RPS15AP28-201ENST00000435088 386 ntBASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 AC097462.1-201ENST00000514125 324 ntBASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 RNU7-116P-201ENST00000516940 62 ntBASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 SNORA81.3-201ENST00000517283 198 ntBASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 AC046143.2-201ENST00000609789 160 ntBASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 AL008718.3-201ENST00000610217 321 ntBASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 AL353149.1-201ENST00000610667 244 ntBASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 AC022202.1-201ENST00000613515 211 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 220.5 ms