Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC105758.1-201ENST00000506038 399 ntBASIC1.38□□□□□ -2.19
VPS33AQ96AX1 SNORA70.12-201ENST00000516084 153 ntBASIC1.38□□□□□ -2.19
VPS33AQ96AX1 RNU6-277P-201ENST00000516272 106 ntBASIC1.38□□□□□ -2.19
VPS33AQ96AX1 RN7SKP88-201ENST00000516847 250 ntBASIC1.38□□□□□ -2.19
VPS33AQ96AX1 AL513534.2-201ENST00000603836 250 ntBASIC1.38□□□□□ -2.19
VPS33AQ96AX1 7SK.8-201ENST00000612110 250 ntBASIC1.38□□□□□ -2.19
VPS33AQ96AX1 7SK.11-201ENST00000615477 250 ntBASIC1.38□□□□□ -2.19
VPS33AQ96AX1 MIR8065-201ENST00000620577 100 ntBASIC1.38□□□□□ -2.19
VPS33AQ96AX1 7SK.13-201ENST00000622040 250 ntBASIC1.38□□□□□ -2.19
VPS33AQ96AX1 Y_RNA.124-201ENST00000363339 93 ntBASIC1.37□□□□□ -2.19
VPS33AQ96AX1 RNU4-13P-201ENST00000364019 141 ntBASIC1.37□□□□□ -2.19
VPS33AQ96AX1 SNORD115-30-201ENST00000364117 82 ntBASIC1.37□□□□□ -2.19
VPS33AQ96AX1 Y_RNA.259-201ENST00000364619 101 ntBASIC1.37□□□□□ -2.19
VPS33AQ96AX1 Y_RNA.384-201ENST00000383909 102 ntBASIC1.37□□□□□ -2.19
VPS33AQ96AX1 RNY4P36-201ENST00000391116 96 ntBASIC1.37□□□□□ -2.19
VPS33AQ96AX1 MIR1289-2-201ENST00000408360 111 ntBASIC1.37□□□□□ -2.19
VPS33AQ96AX1 Y_RNA.605-201ENST00000410577 105 ntBASIC1.37□□□□□ -2.19
VPS33AQ96AX1 AC092991.1-201ENST00000477176 376 ntBASIC1.37□□□□□ -2.19
VPS33AQ96AX1 OR9P1P-201ENST00000496431 281 ntBASIC1.37□□□□□ -2.19
VPS33AQ96AX1 AC023442.1-201ENST00000531247 422 ntBASIC1.37□□□□□ -2.19
VPS33AQ96AX1 AC004467.1-201ENST00000615678 330 ntBASIC1.37□□□□□ -2.19
VPS33AQ96AX1 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
VPS33AQ96AX1 SNORA1B-201ENST00000362535 133 ntBASIC1.36□□□□□ -2.19
VPS33AQ96AX1 RNU6-961P-201ENST00000363893 105 ntBASIC1.36□□□□□ -2.19
VPS33AQ96AX1 MIR559-201ENST00000385188 96 ntBASIC1.36□□□□□ -2.19
VPS33AQ96AX1 SNORA26.9-201ENST00000391322 122 ntBASIC1.36□□□□□ -2.19
VPS33AQ96AX1 RNU6-1304P-201ENST00000411374 106 ntBASIC1.36□□□□□ -2.19
VPS33AQ96AX1 SDAD1P3-201ENST00000427380 333 ntBASIC1.36□□□□□ -2.19
VPS33AQ96AX1 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS33AQ96AX1 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS33AQ96AX1 HSPE1P13-201ENST00000451143 297 ntBASIC1.36□□□□□ -2.19
VPS33AQ96AX1 RNA5SP168-201ENST00000516642 112 ntBASIC1.36□□□□□ -2.19
VPS33AQ96AX1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.36□□□□□ -2.19
VPS33AQ96AX1 AC008269.2-201ENST00000561915 1105 ntBASIC1.36□□□□□ -2.19
VPS33AQ96AX1 AC015720.1-201ENST00000565251 277 ntBASIC1.36□□□□□ -2.19
VPS33AQ96AX1 AC005730.3-201ENST00000583067 366 ntBASIC1.36□□□□□ -2.19
VPS33AQ96AX1 AC006380.1-201ENST00000603598 186 ntBASIC1.36□□□□□ -2.19
VPS33AQ96AX1 AL132765.2-201ENST00000610812 351 ntBASIC1.36□□□□□ -2.19
VPS33AQ96AX1 U2.1-201ENST00000618978 145 ntBASIC1.36□□□□□ -2.19
VPS33AQ96AX1 MIR1302-1-201ENST00000637932 143 ntBASIC1.36□□□□□ -2.19
VPS33AQ96AX1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.36□□□□□ -2.19
VPS33AQ96AX1 Y_RNA.70-201ENST00000362886 110 ntBASIC1.35□□□□□ -2.19
VPS33AQ96AX1 RNU6-199P-201ENST00000362954 107 ntBASIC1.35□□□□□ -2.19
VPS33AQ96AX1 SNORA72.1-201ENST00000363485 129 ntBASIC1.35□□□□□ -2.19
VPS33AQ96AX1 RNA5SP190-201ENST00000365222 118 ntBASIC1.35□□□□□ -2.19
VPS33AQ96AX1 RNU6-1040P-201ENST00000383974 107 ntBASIC1.35□□□□□ -2.19
VPS33AQ96AX1 SNORD116-29-201ENST00000384516 83 ntBASIC1.35□□□□□ -2.19
VPS33AQ96AX1 MIR628-201ENST00000385229 95 ntBASIC1.35□□□□□ -2.19
VPS33AQ96AX1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.35□□□□□ -2.19
VPS33AQ96AX1 MRPS18CP6-201ENST00000423587 223 ntBASIC1.35□□□□□ -2.19
VPS33AQ96AX1 RNU6-1012P-201ENST00000516606 109 ntBASIC1.35□□□□□ -2.19
VPS33AQ96AX1 SNORD53B-201ENST00000577887 78 ntBASIC1.35□□□□□ -2.19
VPS33AQ96AX1 Y_RNA.314-201ENST00000365114 102 ntBASIC1.34□□□□□ -2.19
VPS33AQ96AX1 RNU6-926P-201ENST00000384075 107 ntBASIC1.34□□□□□ -2.19
VPS33AQ96AX1 MIR653-201ENST00000385279 96 ntBASIC1.34□□□□□ -2.19
VPS33AQ96AX1 SNORA67.6-201ENST00000391093 99 ntBASIC1.34□□□□□ -2.19
VPS33AQ96AX1 RNU2-54P-201ENST00000410299 190 ntBASIC1.34□□□□□ -2.19
VPS33AQ96AX1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.34□□□□□ -2.19
VPS33AQ96AX1 CALM2P4-201ENST00000430810 426 ntBASIC1.34□□□□□ -2.19
VPS33AQ96AX1 SNORD13-201ENST00000459299 104 ntBASIC1.34□□□□□ -2.19
VPS33AQ96AX1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.34□□□□□ -2.19
VPS33AQ96AX1 FGF7P4-201ENST00000509595 295 ntBASIC1.34□□□□□ -2.19
VPS33AQ96AX1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.34□□□□□ -2.19
VPS33AQ96AX1 RNU6-1291P-201ENST00000516591 104 ntBASIC1.34□□□□□ -2.19
VPS33AQ96AX1 RNU6-1096P-201ENST00000517089 102 ntBASIC1.34□□□□□ -2.19
VPS33AQ96AX1 Y_RNA.718-201ENST00000517110 102 ntBASIC1.34□□□□□ -2.19
VPS33AQ96AX1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.34□□□□□ -2.19
VPS33AQ96AX1 AL645939.4-201ENST00000604495 135 ntBASIC1.34□□□□□ -2.19
VPS33AQ96AX1 MTND4LP32-201ENST00000636111 270 ntBASIC1.34□□□□□ -2.19
VPS33AQ96AX1 RNU6-60P-201ENST00000364792 103 ntBASIC1.33□□□□□ -2.2
VPS33AQ96AX1 U8.16-201ENST00000391279 133 ntBASIC1.33□□□□□ -2.2
VPS33AQ96AX1 SNRPGP13-201ENST00000442212 177 ntBASIC1.33□□□□□ -2.2
VPS33AQ96AX1 RNU7-169P-201ENST00000459456 61 ntBASIC1.33□□□□□ -2.2
VPS33AQ96AX1 AL163540.1-201ENST00000485382 386 ntBASIC1.33□□□□□ -2.2
VPS33AQ96AX1 SNORA31.24-201ENST00000517232 57 ntBASIC1.33□□□□□ -2.2
VPS33AQ96AX1 AC019288.1-201ENST00000557918 224 ntBASIC1.33□□□□□ -2.2
VPS33AQ96AX1 MIR4778-201ENST00000577635 80 ntBASIC1.33□□□□□ -2.2
VPS33AQ96AX1 AC005176.2-201ENST00000596933 147 ntBASIC1.33□□□□□ -2.2
VPS33AQ96AX1 RBM11P1-201ENST00000604951 799 ntBASIC1.33□□□□□ -2.2
VPS33AQ96AX1 GHRLOS.1-201ENST00000610995 70 ntBASIC1.33□□□□□ -2.2
VPS33AQ96AX1 AC240442.1-201ENST00000616055 283 ntBASIC1.33□□□□□ -2.2
VPS33AQ96AX1 AC106754.2-201ENST00000623006 233 ntBASIC1.33□□□□□ -2.2
VPS33AQ96AX1 AC138305.3-201ENST00000624988 240 ntBASIC1.33□□□□□ -2.2
VPS33AQ96AX1 Y_RNA.27-201ENST00000362540 103 ntBASIC1.32□□□□□ -2.2
VPS33AQ96AX1 U8.1-201ENST00000362843 134 ntBASIC1.32□□□□□ -2.2
VPS33AQ96AX1 MIR758-201ENST00000390227 88 ntBASIC1.32□□□□□ -2.2
VPS33AQ96AX1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.32□□□□□ -2.2
VPS33AQ96AX1 MTCO2P27-201ENST00000420740 428 ntBASIC1.32□□□□□ -2.2
VPS33AQ96AX1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.32□□□□□ -2.2
VPS33AQ96AX1 RPS29P29-201ENST00000456396 171 ntBASIC1.32□□□□□ -2.2
VPS33AQ96AX1 RNU7-152P-201ENST00000458982 64 ntBASIC1.32□□□□□ -2.2
VPS33AQ96AX1 AL049830.1-201ENST00000468034 425 ntBASIC1.32□□□□□ -2.2
VPS33AQ96AX1 RNU6-165P-201ENST00000517170 99 ntBASIC1.32□□□□□ -2.2
VPS33AQ96AX1 AC090049.2-201ENST00000550377 109 ntBASIC1.32□□□□□ -2.2
VPS33AQ96AX1 AC055872.1-201ENST00000570978 278 ntBASIC1.32□□□□□ -2.2
VPS33AQ96AX1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
VPS33AQ96AX1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
VPS33AQ96AX1 RNA5SP327-201ENST00000362494 101 ntBASIC1.31□□□□□ -2.2
VPS33AQ96AX1 Y_RNA.230-201ENST00000364348 109 ntBASIC1.31□□□□□ -2.2
VPS33AQ96AX1 SNORA25.8-201ENST00000364831 128 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 205.2 ms