| CLUAP1 | Q96AJ1 | RNU6-643P-201 | ENST00000384018 | 107 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| CLUAP1 | Q96AJ1 | RNU6-1072P-201 | ENST00000384703 | 107 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| CLUAP1 | Q96AJ1 | RNU6-443P-201 | ENST00000384780 | 107 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| CLUAP1 | Q96AJ1 | SNORA79-201 | ENST00000408376 | 140 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| CLUAP1 | Q96AJ1 | MIR1278-201 | ENST00000408753 | 81 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| CLUAP1 | Q96AJ1 | VTRNA2-2P-201 | ENST00000516091 | 103 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| CLUAP1 | Q96AJ1 | RNU1-142P-201 | ENST00000516682 | 145 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| CLUAP1 | Q96AJ1 | AC087362.2-201 | ENST00000529325 | 256 nt | TSL 3 BASIC | 3.78 | □□□□□ -1.8 | | |
| CLUAP1 | Q96AJ1 | ADARB1-213 | ENST00000611195 | 159 nt | TSL 5 BASIC | 3.78 | □□□□□ -1.8 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.778-201 | ENST00000620203 | 90 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| CLUAP1 | Q96AJ1 | AP006437.1-201 | ENST00000641440 | 3685 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | CLOCK-201 | ENST00000309964 | 10304 nt | APPRIS P1 TSL 1 (best) BASIC | 3.77 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AC100821.1-201 | ENST00000523153 | 2479 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | KIAA1524-206 | ENST00000491772 | 3877 nt | TSL 1 (best) BASIC | 3.77 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AL592431.2-201 | ENST00000422198 | 171 nt | TSL 3 BASIC | 3.77 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | RNU7-94P-201 | ENST00000459576 | 63 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AC009930.1-201 | ENST00000522330 | 191 nt | TSL 5 BASIC | 3.77 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AC011604.1-201 | ENST00000545978 | 196 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | DNAJC19P2-201 | ENST00000593340 | 302 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AL021707.8-201 | ENST00000609428 | 183 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | KTN1-206 | ENST00000413890 | 4473 nt | APPRIS ALT2 TSL 5 BASIC | 3.77 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | CAPS2-203 | ENST00000393284 | 3430 nt | APPRIS P1 TSL 1 (best) BASIC | 3.76 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | KIAA1107-202 | ENST00000636278 | 4065 nt | APPRIS P1 TSL 5 BASIC | 3.76 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | OR2L2-203 | ENST00000642011 | 4225 nt | APPRIS P1 BASIC | 3.76 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | MIR422A-201 | ENST00000362286 | 90 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | RNU6-1130P-201 | ENST00000365434 | 107 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | RNU6-1186P-201 | ENST00000410429 | 97 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | CST2P1-201 | ENST00000425770 | 87 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AL731684.2-201 | ENST00000426839 | 333 nt | TSL 5 BASIC | 3.76 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | RPS29P6-201 | ENST00000438196 | 145 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | RNU6-1041P-201 | ENST00000516254 | 102 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | RNA5SP341-201 | ENST00000516261 | 117 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | RN7SKP282-201 | ENST00000516824 | 299 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AC090155.2-201 | ENST00000518854 | 267 nt | TSL 3 BASIC | 3.76 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AL358944.1-201 | ENST00000528537 | 144 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AC138625.2-201 | ENST00000563968 | 551 nt | TSL 3 BASIC | 3.76 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AC005000.2-201 | ENST00000605468 | 310 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AC018630.2-201 | ENST00000534866 | 2403 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | ERBIN-204 | ENST00000380943 | 6410 nt | APPRIS P3 TSL 1 (best) BASIC | 3.76 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | EXOC6-203 | ENST00000371552 | 3564 nt | TSL 5 BASIC | 3.76 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | MME-216 | ENST00000615825 | 5523 nt | APPRIS P1 TSL 1 (best) BASIC | 3.75 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | MAPK10-266 | ENST00000641066 | 6555 nt | BASIC | 3.75 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | LPP-221 | ENST00000618621 | 18277 nt | TSL 1 (best) BASIC | 3.75 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | LPP-222 | ENST00000640853 | 18277 nt | APPRIS P1 TSL 1 (best) BASIC | 3.75 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.488-201 | ENST00000384403 | 102 nt | BASIC | 3.75 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | RNU6-136P-201 | ENST00000384663 | 107 nt | BASIC | 3.75 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | MT-TT-201 | ENST00000387460 | 66 nt | BASIC | 3.75 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | HIST1H2APS3-201 | ENST00000403259 | 134 nt | BASIC | 3.75 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | MIR1262-201 | ENST00000408276 | 93 nt | BASIC | 3.75 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | Z92545.1-201 | ENST00000411782 | 234 nt | BASIC | 3.75 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | UBBP3-201 | ENST00000445497 | 241 nt | BASIC | 3.75 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AC092185.1-201 | ENST00000491371 | 97 nt | BASIC | 3.75 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | CYCSP26-201 | ENST00000534107 | 320 nt | BASIC | 3.75 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AC024610.1-201 | ENST00000582685 | 323 nt | TSL 3 BASIC | 3.75 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | DSCR8-208 | ENST00000614538 | 403 nt | APPRIS P5 TSL 5 BASIC | 3.75 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | CACNB4-228 | ENST00000636598 | 7808 nt | TSL 5 BASIC | 3.74 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | SNORD56.5-201 | ENST00000364281 | 72 nt | BASIC | 3.74 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | MIR181B1-201 | ENST00000385240 | 110 nt | BASIC | 3.74 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | ITCH-AS1-201 | ENST00000454205 | 299 nt | TSL 5 BASIC | 3.74 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | LINC01203-202 | ENST00000456091 | 476 nt | TSL 3 BASIC | 3.74 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | RNU6-346P-201 | ENST00000516288 | 111 nt | BASIC | 3.74 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | RNU6-1096P-201 | ENST00000517089 | 102 nt | BASIC | 3.74 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AL160236.1-201 | ENST00000556317 | 195 nt | BASIC | 3.74 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AC073413.2-201 | ENST00000604332 | 360 nt | BASIC | 3.74 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AC004832.5-201 | ENST00000608677 | 401 nt | BASIC | 3.74 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | C20orf24-208 | ENST00000639924 | 351 nt | TSL 5 BASIC | 3.74 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | GCNT4-201 | ENST00000322348 | 5554 nt | APPRIS P1 BASIC | 3.74 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | CYLC2-202 | ENST00000487798 | 2053 nt | APPRIS P1 TSL 5 BASIC | 3.74 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | PRKG1-205 | ENST00000401604 | 5922 nt | TSL 5 BASIC | 3.73 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | SNORA38-201 | ENST00000363946 | 132 nt | BASIC | 3.73 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | SNORD114-6-201 | ENST00000364393 | 72 nt | BASIC | 3.73 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | NDUFB4P4-201 | ENST00000404822 | 243 nt | BASIC | 3.73 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | LINC01073-201 | ENST00000441659 | 149 nt | TSL 3 BASIC | 3.73 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | MIR3646-201 | ENST00000578301 | 84 nt | BASIC | 3.73 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AL929325.1-201 | ENST00000603096 | 117 nt | BASIC | 3.73 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AC093010.3-201 | ENST00000570269 | 15214 nt | BASIC | 3.73 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | ATP2B1-201 | ENST00000261173 | 6777 nt | APPRIS P1 TSL 1 (best) BASIC | 3.72 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | RICTOR-201 | ENST00000296782 | 7505 nt | TSL 1 (best) BASIC | 3.72 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | THOC2-201 | ENST00000245838 | 5609 nt | APPRIS P1 TSL 5 BASIC | 3.72 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AL157777.2-201 | ENST00000258070 | 137 nt | BASIC | 3.72 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.215-201 | ENST00000364204 | 112 nt | BASIC | 3.72 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | RNA5SP323-201 | ENST00000391094 | 133 nt | BASIC | 3.72 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | RNU6-341P-201 | ENST00000516973 | 96 nt | BASIC | 3.72 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AC090138.1-201 | ENST00000524493 | 578 nt | TSL 4 BASIC | 3.72 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AC091178.2-201 | ENST00000584401 | 117 nt | BASIC | 3.72 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | JPX_2.1-201 | ENST00000614161 | 69 nt | BASIC | 3.72 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | AC012640.5-201 | ENST00000623897 | 319 nt | BASIC | 3.72 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | FAM184A-202 | ENST00000352896 | 3700 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.71 | □□□□□ -1.81 | | |
| CLUAP1 | Q96AJ1 | CREBRF-201 | ENST00000296953 | 7778 nt | APPRIS P1 TSL 1 (best) BASIC | 3.71 | □□□□□ -1.82 | | |
| CLUAP1 | Q96AJ1 | IL6ST-201 | ENST00000336909 | 8776 nt | APPRIS P1 TSL 2 BASIC | 3.71 | □□□□□ -1.82 | | |
| CLUAP1 | Q96AJ1 | RNU6-151P-201 | ENST00000364158 | 107 nt | BASIC | 3.71 | □□□□□ -1.82 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.242-201 | ENST00000364473 | 110 nt | BASIC | 3.71 | □□□□□ -1.82 | | |
| CLUAP1 | Q96AJ1 | SNORD113-1-201 | ENST00000365321 | 69 nt | BASIC | 3.71 | □□□□□ -1.82 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.587-201 | ENST00000391210 | 103 nt | BASIC | 3.71 | □□□□□ -1.82 | | |
| CLUAP1 | Q96AJ1 | SNORA26-201 | ENST00000391286 | 122 nt | BASIC | 3.71 | □□□□□ -1.82 | | |
| CLUAP1 | Q96AJ1 | AC006461.1-201 | ENST00000412637 | 326 nt | BASIC | 3.71 | □□□□□ -1.82 | | |
| CLUAP1 | Q96AJ1 | RNU7-128P-201 | ENST00000517247 | 62 nt | BASIC | 3.71 | □□□□□ -1.82 | | |
| CLUAP1 | Q96AJ1 | AL162274.2-201 | ENST00000614406 | 332 nt | BASIC | 3.71 | □□□□□ -1.82 | | |
| CLUAP1 | Q96AJ1 | RTKN2-202 | ENST00000373789 | 6641 nt | APPRIS P1 TSL 1 (best) BASIC | 3.71 | □□□□□ -1.82 | | |
| CLUAP1 | Q96AJ1 | MIR133A1HG-202 | ENST00000581072 | 4226 nt | TSL 1 (best) BASIC | 3.7 | □□□□□ -1.82 | | |