Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC022493.2-201ENST00000506122 481 ntBASIC1.14□□□□□ -2.23
PTP4A1Q93096 SNORA40.9-201ENST00000515895 93 ntBASIC1.14□□□□□ -2.23
PTP4A1Q93096 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.14□□□□□ -2.23
PTP4A1Q93096 SNORA1B-201ENST00000362535 133 ntBASIC1.13□□□□□ -2.23
PTP4A1Q93096 RNU4-79P-201ENST00000362764 141 ntBASIC1.13□□□□□ -2.23
PTP4A1Q93096 Y_RNA.140-201ENST00000363474 103 ntBASIC1.13□□□□□ -2.23
PTP4A1Q93096 SNORA7.1-201ENST00000363750 139 ntBASIC1.13□□□□□ -2.23
PTP4A1Q93096 U8.16-201ENST00000391279 133 ntBASIC1.13□□□□□ -2.23
PTP4A1Q93096 AP1B1P2-201ENST00000416196 106 ntBASIC1.13□□□□□ -2.23
PTP4A1Q93096 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.13□□□□□ -2.23
PTP4A1Q93096 BTF3P4-201ENST00000418852 495 ntBASIC1.13□□□□□ -2.23
PTP4A1Q93096 MTND3P10-201ENST00000450967 341 ntBASIC1.13□□□□□ -2.23
PTP4A1Q93096 AC233266.1-201ENST00000454518 96 ntBASIC1.13□□□□□ -2.23
PTP4A1Q93096 RPL7P42-201ENST00000481005 679 ntBASIC1.13□□□□□ -2.23
PTP4A1Q93096 RPS23P4-201ENST00000487908 423 ntBASIC1.13□□□□□ -2.23
PTP4A1Q93096 SNORA70.12-201ENST00000516084 153 ntBASIC1.13□□□□□ -2.23
PTP4A1Q93096 RNU6-358P-201ENST00000516564 75 ntBASIC1.13□□□□□ -2.23
PTP4A1Q93096 AC090821.2-201ENST00000523552 176 ntBASIC1.13□□□□□ -2.23
PTP4A1Q93096 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.13□□□□□ -2.23
PTP4A1Q93096 MIR4769-201ENST00000584126 77 ntBASIC1.13□□□□□ -2.23
PTP4A1Q93096 HSPE1P19-201ENST00000603327 295 ntBASIC1.13□□□□□ -2.23
PTP4A1Q93096 AC242852.1-201ENST00000612151 96 ntBASIC1.13□□□□□ -2.23
PTP4A1Q93096 AL357075.2-201ENST00000614906 189 ntBASIC1.13□□□□□ -2.23
PTP4A1Q93096 AC244015.1-201ENST00000622301 99 ntBASIC1.13□□□□□ -2.23
PTP4A1Q93096 AC027514.1-201ENST00000588561 1603 ntBASIC1.12□□□□□ -2.23
PTP4A1Q93096 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
PTP4A1Q93096 MIR378A-201ENST00000362177 66 ntBASIC1.12□□□□□ -2.23
PTP4A1Q93096 RNU6-910P-201ENST00000390844 107 ntBASIC1.12□□□□□ -2.23
PTP4A1Q93096 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.12□□□□□ -2.23
PTP4A1Q93096 MIR2053-201ENST00000459295 91 ntBASIC1.12□□□□□ -2.23
PTP4A1Q93096 AC004223.1-201ENST00000479840 271 ntBASIC1.12□□□□□ -2.23
PTP4A1Q93096 RNU6-947P-201ENST00000516264 106 ntBASIC1.12□□□□□ -2.23
PTP4A1Q93096 RNU6-1291P-201ENST00000516591 104 ntBASIC1.12□□□□□ -2.23
PTP4A1Q93096 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.12□□□□□ -2.23
PTP4A1Q93096 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.12□□□□□ -2.23
PTP4A1Q93096 Y_RNA.339-201ENST00000365325 102 ntBASIC1.11□□□□□ -2.23
PTP4A1Q93096 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.11□□□□□ -2.23
PTP4A1Q93096 SNORA75.4-201ENST00000391278 119 ntBASIC1.11□□□□□ -2.23
PTP4A1Q93096 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.11□□□□□ -2.23
PTP4A1Q93096 MRPL35P3-201ENST00000421557 364 ntBASIC1.11□□□□□ -2.23
PTP4A1Q93096 AC245047.7-201ENST00000440265 293 ntBASIC1.11□□□□□ -2.23
PTP4A1Q93096 OR2A41P-201ENST00000473586 105 ntBASIC1.11□□□□□ -2.23
PTP4A1Q93096 UBL5P1-201ENST00000507979 193 ntBASIC1.11□□□□□ -2.23
PTP4A1Q93096 RNU6-264P-201ENST00000517134 104 ntBASIC1.11□□□□□ -2.23
PTP4A1Q93096 AC136932.1-201ENST00000574771 208 ntBASIC1.11□□□□□ -2.23
PTP4A1Q93096 AC005828.6-201ENST00000606610 232 ntBASIC1.11□□□□□ -2.23
PTP4A1Q93096 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.11□□□□□ -2.23
PTP4A1Q93096 RNU6-874P-201ENST00000362390 105 ntBASIC1.1□□□□□ -2.23
PTP4A1Q93096 Y_RNA.88-201ENST00000363029 99 ntBASIC1.1□□□□□ -2.23
PTP4A1Q93096 RNU6-767P-201ENST00000384132 107 ntBASIC1.1□□□□□ -2.23
PTP4A1Q93096 MIR625-201ENST00000385047 85 ntBASIC1.1□□□□□ -2.23
PTP4A1Q93096 SNORA40.6-201ENST00000391153 128 ntBASIC1.1□□□□□ -2.23
PTP4A1Q93096 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
PTP4A1Q93096 SNORD12B-201ENST00000410433 91 ntBASIC1.1□□□□□ -2.23
PTP4A1Q93096 LINC01399-202ENST00000458450 244 ntBASIC1.1□□□□□ -2.23
PTP4A1Q93096 RNU6-237P-201ENST00000515985 71 ntBASIC1.1□□□□□ -2.23
PTP4A1Q93096 SCARNA16.2-201ENST00000516520 172 ntBASIC1.1□□□□□ -2.23
PTP4A1Q93096 RNU6-1096P-201ENST00000517089 102 ntBASIC1.1□□□□□ -2.23
PTP4A1Q93096 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.1□□□□□ -2.23
PTP4A1Q93096 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.1□□□□□ -2.23
PTP4A1Q93096 MIR4661-201ENST00000582720 75 ntBASIC1.1□□□□□ -2.23
PTP4A1Q93096 MIR3660-201ENST00000584845 100 ntBASIC1.1□□□□□ -2.23
PTP4A1Q93096 AC006380.1-201ENST00000603598 186 ntBASIC1.1□□□□□ -2.23
PTP4A1Q93096 AC080078.3-201ENST00000605407 463 ntBASIC1.1□□□□□ -2.23
PTP4A1Q93096 AL391516.1-201ENST00000554380 2449 ntBASIC1.1□□□□□ -2.23
PTP4A1Q93096 AC005592.1-201ENST00000566527 1640 ntBASIC1.09□□□□□ -2.23
PTP4A1Q93096 RNU6-1105P-201ENST00000384774 107 ntBASIC1.09□□□□□ -2.23
PTP4A1Q93096 MIR19B1-201ENST00000384829 87 ntBASIC1.09□□□□□ -2.23
PTP4A1Q93096 SNORD41-201ENST00000386967 70 ntBASIC1.09□□□□□ -2.23
PTP4A1Q93096 MIR891A-201ENST00000401237 79 ntBASIC1.09□□□□□ -2.23
PTP4A1Q93096 RNU5A-5P-201ENST00000411054 116 ntBASIC1.09□□□□□ -2.23
PTP4A1Q93096 AC063976.4-201ENST00000421971 163 ntBASIC1.09□□□□□ -2.23
PTP4A1Q93096 AC048334.1-201ENST00000477975 159 ntBASIC1.09□□□□□ -2.23
PTP4A1Q93096 RNA5SP458-201ENST00000516188 119 ntBASIC1.09□□□□□ -2.23
PTP4A1Q93096 RNU6-917P-201ENST00000516294 104 ntBASIC1.09□□□□□ -2.23
PTP4A1Q93096 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.09□□□□□ -2.23
PTP4A1Q93096 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.09□□□□□ -2.23
PTP4A1Q93096 AL353770.2-201ENST00000620024 78 ntBASIC1.09□□□□□ -2.23
PTP4A1Q93096 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.09□□□□□ -2.24
PTP4A1Q93096 Y_RNA.243-201ENST00000364481 109 ntBASIC1.08□□□□□ -2.24
PTP4A1Q93096 RNU6-117P-201ENST00000365415 107 ntBASIC1.08□□□□□ -2.24
PTP4A1Q93096 SNORA80D-201ENST00000384488 135 ntBASIC1.08□□□□□ -2.24
PTP4A1Q93096 SNORA69.1-201ENST00000390904 137 ntBASIC1.08□□□□□ -2.24
PTP4A1Q93096 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
PTP4A1Q93096 Y_RNA.635-201ENST00000459041 101 ntBASIC1.08□□□□□ -2.24
PTP4A1Q93096 RNU7-30P-201ENST00000516835 62 ntBASIC1.08□□□□□ -2.24
PTP4A1Q93096 AC068790.6-201ENST00000602558 258 ntBASIC1.08□□□□□ -2.24
PTP4A1Q93096 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
PTP4A1Q93096 RNU6-1301P-201ENST00000362724 104 ntBASIC1.07□□□□□ -2.24
PTP4A1Q93096 RNU6-833P-201ENST00000363486 107 ntBASIC1.07□□□□□ -2.24
PTP4A1Q93096 Y_RNA.404-201ENST00000383978 102 ntBASIC1.07□□□□□ -2.24
PTP4A1Q93096 RNU6-318P-201ENST00000384283 103 ntBASIC1.07□□□□□ -2.24
PTP4A1Q93096 Y_RNA.577-201ENST00000384794 101 ntBASIC1.07□□□□□ -2.24
PTP4A1Q93096 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.07□□□□□ -2.24
PTP4A1Q93096 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.07□□□□□ -2.24
PTP4A1Q93096 MTND4P28-201ENST00000426217 387 ntBASIC1.07□□□□□ -2.24
PTP4A1Q93096 AC093850.1-201ENST00000454121 251 ntBASIC1.07□□□□□ -2.24
PTP4A1Q93096 U8.22-201ENST00000459141 133 ntBASIC1.07□□□□□ -2.24
PTP4A1Q93096 CYCTP-201ENST00000504253 315 ntBASIC1.07□□□□□ -2.24
PTP4A1Q93096 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms