Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 AC080128.1-201ENST00000474389 1917 ntBASIC3.21□□□□□ -1.9
SMARCC1Q92922 Y_RNA.291-201ENST00000364886 113 ntBASIC3.21□□□□□ -1.9
SMARCC1Q92922 RNU6-407P-201ENST00000365280 104 ntBASIC3.21□□□□□ -1.9
SMARCC1Q92922 SNORD113-1-201ENST00000365321 69 ntBASIC3.21□□□□□ -1.9
SMARCC1Q92922 Y_RNA.368-201ENST00000365547 113 ntBASIC3.21□□□□□ -1.9
SMARCC1Q92922 Y_RNA.398-201ENST00000383952 99 ntBASIC3.21□□□□□ -1.9
SMARCC1Q92922 MIR627-201ENST00000384979 97 ntBASIC3.21□□□□□ -1.9
SMARCC1Q92922 U6atac.2-201ENST00000408644 118 ntBASIC3.21□□□□□ -1.9
SMARCC1Q92922 RNU5E-9P-201ENST00000411164 104 ntBASIC3.21□□□□□ -1.9
SMARCC1Q92922 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.21□□□□□ -1.9
SMARCC1Q92922 HSPE1P21-201ENST00000438283 308 ntBASIC3.21□□□□□ -1.9
SMARCC1Q92922 RPL39P40-201ENST00000445481 146 ntBASIC3.21□□□□□ -1.9
SMARCC1Q92922 RPPH1-2P-201ENST00000516688 293 ntBASIC3.21□□□□□ -1.9
SMARCC1Q92922 AC132825.6-201ENST00000638861 357 ntBASIC3.21□□□□□ -1.9
SMARCC1Q92922 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SMARCC1Q92922 AC068700.1-201ENST00000565862 3754 ntBASIC3.21□□□□□ -1.9
SMARCC1Q92922 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SMARCC1Q92922 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SMARCC1Q92922 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.2□□□□□ -1.9
SMARCC1Q92922 Y_RNA.172-201ENST00000363765 102 ntBASIC3.2□□□□□ -1.9
SMARCC1Q92922 Y_RNA.310-201ENST00000365063 113 ntBASIC3.2□□□□□ -1.9
SMARCC1Q92922 RNU6-418P-201ENST00000384035 107 ntBASIC3.2□□□□□ -1.9
SMARCC1Q92922 Y_RNA.456-201ENST00000384232 111 ntBASIC3.2□□□□□ -1.9
SMARCC1Q92922 AL355796.1-201ENST00000406706 323 ntBASIC3.2□□□□□ -1.9
SMARCC1Q92922 RNU6-1135P-201ENST00000411083 103 ntBASIC3.2□□□□□ -1.9
SMARCC1Q92922 AL606753.1-201ENST00000427435 87 ntBASIC3.2□□□□□ -1.9
SMARCC1Q92922 AC104389.3-201ENST00000445629 235 ntBASIC3.2□□□□□ -1.9
SMARCC1Q92922 RPS27AP9-201ENST00000477681 438 ntBASIC3.2□□□□□ -1.9
SMARCC1Q92922 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.2□□□□□ -1.9
SMARCC1Q92922 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SMARCC1Q92922 AC015712.3-201ENST00000559380 164 ntBASIC3.2□□□□□ -1.9
SMARCC1Q92922 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SMARCC1Q92922 MIR1248-201ENST00000629190 106 ntBASIC3.2□□□□□ -1.9
SMARCC1Q92922 AL161431.1-201ENST00000618966 4205 ntBASIC3.2□□□□□ -1.9
SMARCC1Q92922 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMARCC1Q92922 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SMARCC1Q92922 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SMARCC1Q92922 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.19□□□□□ -1.9
SMARCC1Q92922 RNU6-899P-201ENST00000363947 107 ntBASIC3.19□□□□□ -1.9
SMARCC1Q92922 SNORD31B-201ENST00000364977 69 ntBASIC3.19□□□□□ -1.9
SMARCC1Q92922 Y_RNA.412-201ENST00000384001 104 ntBASIC3.19□□□□□ -1.9
SMARCC1Q92922 SNORA20B-201ENST00000384220 132 ntBASIC3.19□□□□□ -1.9
SMARCC1Q92922 RNU6-975P-201ENST00000384296 105 ntBASIC3.19□□□□□ -1.9
SMARCC1Q92922 RNU2-32P-201ENST00000411193 191 ntBASIC3.19□□□□□ -1.9
SMARCC1Q92922 MICF-203ENST00000432679 129 ntBASIC3.19□□□□□ -1.9
SMARCC1Q92922 RNU7-141P-201ENST00000459304 62 ntBASIC3.19□□□□□ -1.9
SMARCC1Q92922 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.19□□□□□ -1.9
SMARCC1Q92922 AC023141.11-201ENST00000508864 202 ntBASIC3.19□□□□□ -1.9
SMARCC1Q92922 AC021269.2-201ENST00000532318 330 ntBASIC3.19□□□□□ -1.9
SMARCC1Q92922 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.19□□□□□ -1.9
SMARCC1Q92922 AC004832.4-201ENST00000608952 331 ntBASIC3.19□□□□□ -1.9
SMARCC1Q92922 MIR5739-201ENST00000619803 80 ntBASIC3.19□□□□□ -1.9
SMARCC1Q92922 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
SMARCC1Q92922 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.19□□□□□ -1.9
SMARCC1Q92922 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SMARCC1Q92922 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SMARCC1Q92922 RNU6-1205P-201ENST00000363625 106 ntBASIC3.18□□□□□ -1.9
SMARCC1Q92922 SNORA68.1-201ENST00000364537 132 ntBASIC3.18□□□□□ -1.9
SMARCC1Q92922 Y_RNA.361-201ENST00000365515 120 ntBASIC3.18□□□□□ -1.9
SMARCC1Q92922 SNORD116-18-201ENST00000383961 92 ntBASIC3.18□□□□□ -1.9
SMARCC1Q92922 RNU6-546P-201ENST00000383991 107 ntBASIC3.18□□□□□ -1.9
SMARCC1Q92922 SNORA8.3-201ENST00000384679 139 ntBASIC3.18□□□□□ -1.9
SMARCC1Q92922 Y_RNA.572-201ENST00000384757 98 ntBASIC3.18□□□□□ -1.9
SMARCC1Q92922 RPS12P2-201ENST00000439728 269 ntBASIC3.18□□□□□ -1.9
SMARCC1Q92922 RPL23AP7-203ENST00000449021 469 ntBASIC3.18□□□□□ -1.9
SMARCC1Q92922 AC010409.1-201ENST00000487382 476 ntBASIC3.18□□□□□ -1.9
SMARCC1Q92922 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.18□□□□□ -1.9
SMARCC1Q92922 Y_RNA.797-201ENST00000515977 94 ntBASIC3.18□□□□□ -1.9
SMARCC1Q92922 RNA5SP490-201ENST00000517141 136 ntBASIC3.18□□□□□ -1.9
SMARCC1Q92922 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.18□□□□□ -1.9
SMARCC1Q92922 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.18□□□□□ -1.9
SMARCC1Q92922 AC068647.2-201ENST00000637380 353 ntBASIC3.18□□□□□ -1.9
SMARCC1Q92922 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SMARCC1Q92922 AC016717.2-201ENST00000609089 5141 ntBASIC3.17□□□□□ -1.9
SMARCC1Q92922 RNA5SP456-201ENST00000364002 114 ntBASIC3.17□□□□□ -1.9
SMARCC1Q92922 RNU6-381P-201ENST00000391259 108 ntBASIC3.17□□□□□ -1.9
SMARCC1Q92922 MIR873-201ENST00000401120 77 ntBASIC3.17□□□□□ -1.9
SMARCC1Q92922 AL590004.2-201ENST00000404787 371 ntBASIC3.17□□□□□ -1.9
SMARCC1Q92922 MIR1289-2-201ENST00000408360 111 ntBASIC3.17□□□□□ -1.9
SMARCC1Q92922 RNU6-394P-201ENST00000410735 107 ntBASIC3.17□□□□□ -1.9
SMARCC1Q92922 AL591806.2-201ENST00000433122 173 ntBASIC3.17□□□□□ -1.9
SMARCC1Q92922 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SMARCC1Q92922 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.17□□□□□ -1.9
SMARCC1Q92922 SNORD65B-201ENST00000459126 73 ntBASIC3.17□□□□□ -1.9
SMARCC1Q92922 RNU6-221P-201ENST00000459541 99 ntBASIC3.17□□□□□ -1.9
SMARCC1Q92922 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.17□□□□□ -1.9
SMARCC1Q92922 RNU7-200P-201ENST00000516105 62 ntBASIC3.17□□□□□ -1.9
SMARCC1Q92922 RNU6-1337P-201ENST00000516525 95 ntBASIC3.17□□□□□ -1.9
SMARCC1Q92922 MIR3684-201ENST00000579779 74 ntBASIC3.17□□□□□ -1.9
SMARCC1Q92922 AC103810.6-201ENST00000606708 136 ntBASIC3.17□□□□□ -1.9
SMARCC1Q92922 Y_RNA.802-201ENST00000614892 130 ntBASIC3.17□□□□□ -1.9
SMARCC1Q92922 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.17□□□□□ -1.9
SMARCC1Q92922 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMARCC1Q92922 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SMARCC1Q92922 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
SMARCC1Q92922 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMARCC1Q92922 Y_RNA.24-201ENST00000362508 103 ntBASIC3.16□□□□□ -1.9
SMARCC1Q92922 RNU1-23P-201ENST00000363361 144 ntBASIC3.16□□□□□ -1.9
SMARCC1Q92922 Y_RNA.272-201ENST00000364696 102 ntBASIC3.16□□□□□ -1.9
SMARCC1Q92922 RNA5SP240-201ENST00000365355 128 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms