Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 MTND4LP32-201ENST00000636111 270 ntBASIC0.95□□□□□ -2.26
SHROOM3Q8TF72 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 RNU6-874P-201ENST00000362390 105 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 RNU6-961P-201ENST00000363893 105 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 MIR586-201ENST00000385035 97 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 RNA5SP504-201ENST00000410676 117 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 FTH1P12-201ENST00000432137 551 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 snoU13.27-201ENST00000459278 104 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 RNU6-856P-201ENST00000516959 98 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 RPL17P51-201ENST00000605218 238 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 LARP7P1-201ENST00000605576 316 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 SNORD58B-201ENST00000607313 66 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 AC006157.1-201ENST00000611750 366 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 AC007742.2-201ENST00000618226 398 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.58-201ENST00000362807 102 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.85-201ENST00000363014 111 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.154-201ENST00000363624 102 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 RNY3P1-201ENST00000365085 102 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 RNY3-201ENST00000365484 102 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.428-201ENST00000384078 102 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 AL591704.2-201ENST00000421658 181 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 MTND1P14-201ENST00000427400 950 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 AC245047.3-201ENST00000429428 127 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 AC236972.2-201ENST00000434979 310 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 AL606517.2-201ENST00000442855 241 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 AC091021.1-201ENST00000468051 388 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 MIR2355-201ENST00000517199 87 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 FRG2DP-202ENST00000566967 323 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 MIR5690-201ENST00000583739 73 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 UBE2V2P2-201ENST00000587677 504 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 AC025253.1-201ENST00000613623 543 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 AL357075.2-201ENST00000614906 189 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 AC087588.2-201ENST00000617667 426 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 MIR6513-201ENST00000621188 64 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 AC091925.1-201ENST00000623204 462 ntBASIC0.94□□□□□ -2.26
SHROOM3Q8TF72 RNU4-9P-201ENST00000364951 139 ntBASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 RNU6-376P-201ENST00000384731 106 ntBASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 MTCYBP4-201ENST00000401524 249 ntBASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 MRPL35P1-201ENST00000404272 572 ntBASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 RNU6-1001P-201ENST00000411265 100 ntBASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 MRPS18CP6-201ENST00000423587 223 ntBASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 AC099799.1-201ENST00000439809 192 ntBASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 UBE2V1P7-201ENST00000446395 340 ntBASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 RNU1-131P-201ENST00000458943 161 ntBASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 U8.22-201ENST00000459141 133 ntBASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 RPS23P4-201ENST00000487908 423 ntBASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 AC010469.2-201ENST00000496412 480 ntBASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 RNU6-58P-201ENST00000517143 103 ntBASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 AC091144.1-201ENST00000519573 138 ntBASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 DEFB108E-201ENST00000524692 240 ntBASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 MIR4299-201ENST00000577899 72 ntBASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 AL773524.1-201ENST00000614065 229 ntBASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.93□□□□□ -2.26
SHROOM3Q8TF72 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.27-201ENST00000362540 103 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 RNA5SP361-201ENST00000362686 118 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.67-201ENST00000362870 100 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.70-201ENST00000362886 110 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 RNU6-414P-201ENST00000363705 104 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 RNU6-324P-201ENST00000363957 106 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.315-201ENST00000365117 102 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 RNU6-407P-201ENST00000365280 104 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.387-201ENST00000383918 102 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.405-201ENST00000383979 100 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.451-201ENST00000384200 100 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 RNU6-505P-201ENST00000384427 107 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.524-201ENST00000384564 100 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.561-201ENST00000384694 100 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 MIR628-201ENST00000385229 95 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 RNA5SP100-201ENST00000410903 110 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 RNA5SP59-201ENST00000410922 110 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 RPS27P16-201ENST00000425758 201 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 CST2P1-201ENST00000425770 87 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 MTCO3P10-201ENST00000455912 772 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 RNU6-625P-201ENST00000459412 107 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 RNU6-221P-201ENST00000459541 99 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 MTND3P22-201ENST00000510932 243 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 SNORA40.9-201ENST00000515895 93 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 RNU6-1278P-201ENST00000516130 107 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 RNA5SP121-201ENST00000516537 101 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 AL442163.3-201ENST00000554110 156 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 AL078596.1-201ENST00000624856 447 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 MTND4P29-201ENST00000503122 1372 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms