Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 POLR3GP1-201ENST00000594073 261 ntBASIC2.8□□□□□ -1.96
SH3RF2Q8TEC5 AC104465.1-201ENST00000611365 139 ntBASIC2.8□□□□□ -1.96
SH3RF2Q8TEC5 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SH3RF2Q8TEC5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SH3RF2Q8TEC5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
SH3RF2Q8TEC5 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SH3RF2Q8TEC5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
SH3RF2Q8TEC5 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
SH3RF2Q8TEC5 AL356292.1-201ENST00000283110 373 ntBASIC2.79□□□□□ -1.96
SH3RF2Q8TEC5 Y_RNA.8-201ENST00000362353 102 ntBASIC2.79□□□□□ -1.96
SH3RF2Q8TEC5 Y_RNA.172-201ENST00000363765 102 ntBASIC2.79□□□□□ -1.96
SH3RF2Q8TEC5 RNU4-13P-201ENST00000364019 141 ntBASIC2.79□□□□□ -1.96
SH3RF2Q8TEC5 SNORD116-13-201ENST00000384408 92 ntBASIC2.79□□□□□ -1.96
SH3RF2Q8TEC5 RNU6-578P-201ENST00000390980 103 ntBASIC2.79□□□□□ -1.96
SH3RF2Q8TEC5 RNU11-5P-201ENST00000391216 129 ntBASIC2.79□□□□□ -1.96
SH3RF2Q8TEC5 AC016909.1-201ENST00000415916 166 ntBASIC2.79□□□□□ -1.96
SH3RF2Q8TEC5 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.79□□□□□ -1.96
SH3RF2Q8TEC5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.79□□□□□ -1.96
SH3RF2Q8TEC5 RNA5SP385-201ENST00000515947 110 ntBASIC2.79□□□□□ -1.96
SH3RF2Q8TEC5 RNU7-200P-201ENST00000516105 62 ntBASIC2.79□□□□□ -1.96
SH3RF2Q8TEC5 AC127455.1-201ENST00000565496 145 ntBASIC2.79□□□□□ -1.96
SH3RF2Q8TEC5 U4atac.1-201ENST00000618345 95 ntBASIC2.79□□□□□ -1.96
SH3RF2Q8TEC5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SH3RF2Q8TEC5 RNU4-10P-201ENST00000364383 140 ntBASIC2.78□□□□□ -1.96
SH3RF2Q8TEC5 RNU6-969P-201ENST00000383900 105 ntBASIC2.78□□□□□ -1.96
SH3RF2Q8TEC5 MIR627-201ENST00000384979 97 ntBASIC2.78□□□□□ -1.96
SH3RF2Q8TEC5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.78□□□□□ -1.96
SH3RF2Q8TEC5 AL135786.1-201ENST00000415892 214 ntBASIC2.78□□□□□ -1.96
SH3RF2Q8TEC5 AL445687.1-201ENST00000439946 251 ntBASIC2.78□□□□□ -1.96
SH3RF2Q8TEC5 RNU6-667P-201ENST00000517186 102 ntBASIC2.78□□□□□ -1.96
SH3RF2Q8TEC5 MIR6817-201ENST00000615588 66 ntBASIC2.78□□□□□ -1.96
SH3RF2Q8TEC5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SH3RF2Q8TEC5 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SH3RF2Q8TEC5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SH3RF2Q8TEC5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SH3RF2Q8TEC5 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.77□□□□□ -1.97
SH3RF2Q8TEC5 FAM35CP-201ENST00000554755 2470 ntBASIC2.77□□□□□ -1.97
SH3RF2Q8TEC5 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SH3RF2Q8TEC5 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.77□□□□□ -1.97
SH3RF2Q8TEC5 RNA5SP68-201ENST00000363885 119 ntBASIC2.77□□□□□ -1.97
SH3RF2Q8TEC5 RNU4-84P-201ENST00000364200 139 ntBASIC2.77□□□□□ -1.97
SH3RF2Q8TEC5 snoU2_19.4-201ENST00000364329 80 ntBASIC2.77□□□□□ -1.97
SH3RF2Q8TEC5 SNORA25B-201ENST00000365507 128 ntBASIC2.77□□□□□ -1.97
SH3RF2Q8TEC5 RNU6-187P-201ENST00000384139 106 ntBASIC2.77□□□□□ -1.97
SH3RF2Q8TEC5 RNU6-1228P-201ENST00000391014 107 ntBASIC2.77□□□□□ -1.97
SH3RF2Q8TEC5 RN7SKP123-201ENST00000410732 291 ntBASIC2.77□□□□□ -1.97
SH3RF2Q8TEC5 RNU5E-9P-201ENST00000411164 104 ntBASIC2.77□□□□□ -1.97
SH3RF2Q8TEC5 AL162725.1-201ENST00000435405 301 ntBASIC2.77□□□□□ -1.97
SH3RF2Q8TEC5 RPS29P21-201ENST00000496272 170 ntBASIC2.77□□□□□ -1.97
SH3RF2Q8TEC5 NDUFA5P6-201ENST00000542110 379 ntBASIC2.77□□□□□ -1.97
SH3RF2Q8TEC5 MIR4431-201ENST00000579990 94 ntBASIC2.77□□□□□ -1.97
SH3RF2Q8TEC5 MIR4438-201ENST00000585271 93 ntBASIC2.77□□□□□ -1.97
SH3RF2Q8TEC5 RNA5SP125-201ENST00000364843 120 ntBASIC2.76□□□□□ -1.97
SH3RF2Q8TEC5 SNORD50.2-201ENST00000365465 70 ntBASIC2.76□□□□□ -1.97
SH3RF2Q8TEC5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SH3RF2Q8TEC5 RNU6-449P-201ENST00000383914 107 ntBASIC2.76□□□□□ -1.97
SH3RF2Q8TEC5 Y_RNA.398-201ENST00000383952 99 ntBASIC2.76□□□□□ -1.97
SH3RF2Q8TEC5 MIR592-201ENST00000384959 97 ntBASIC2.76□□□□□ -1.97
SH3RF2Q8TEC5 SEPT7P4-201ENST00000437076 306 ntBASIC2.76□□□□□ -1.97
SH3RF2Q8TEC5 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.76□□□□□ -1.97
SH3RF2Q8TEC5 RPL23AP54-201ENST00000495129 419 ntBASIC2.76□□□□□ -1.97
SH3RF2Q8TEC5 RNA5SP148-201ENST00000516527 94 ntBASIC2.76□□□□□ -1.97
SH3RF2Q8TEC5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.76□□□□□ -1.97
SH3RF2Q8TEC5 MIR3910-1-201ENST00000580936 111 ntBASIC2.76□□□□□ -1.97
SH3RF2Q8TEC5 MIR4435-1-201ENST00000582552 80 ntBASIC2.76□□□□□ -1.97
SH3RF2Q8TEC5 MIR3605-201ENST00000583214 100 ntBASIC2.76□□□□□ -1.97
SH3RF2Q8TEC5 U2.20-201ENST00000613956 192 ntBASIC2.76□□□□□ -1.97
SH3RF2Q8TEC5 U2.22-201ENST00000636441 106 ntBASIC2.76□□□□□ -1.97
SH3RF2Q8TEC5 AC068700.1-201ENST00000565862 3754 ntBASIC2.76□□□□□ -1.97
SH3RF2Q8TEC5 Y_RNA.99-201ENST00000363138 105 ntBASIC2.75□□□□□ -1.97
SH3RF2Q8TEC5 RNU1-22P-201ENST00000363334 158 ntBASIC2.75□□□□□ -1.97
SH3RF2Q8TEC5 RNU6-674P-201ENST00000363831 107 ntBASIC2.75□□□□□ -1.97
SH3RF2Q8TEC5 RNU6-117P-201ENST00000365415 107 ntBASIC2.75□□□□□ -1.97
SH3RF2Q8TEC5 RNY3P5-201ENST00000384127 102 ntBASIC2.75□□□□□ -1.97
SH3RF2Q8TEC5 RNU6-376P-201ENST00000384731 106 ntBASIC2.75□□□□□ -1.97
SH3RF2Q8TEC5 MIR613-201ENST00000385248 95 ntBASIC2.75□□□□□ -1.97
SH3RF2Q8TEC5 AL512604.1-201ENST00000404812 257 ntBASIC2.75□□□□□ -1.97
SH3RF2Q8TEC5 AC009238.1-201ENST00000442165 424 ntBASIC2.75□□□□□ -1.97
SH3RF2Q8TEC5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.75□□□□□ -1.97
SH3RF2Q8TEC5 TMSB4XP3-201ENST00000445144 114 ntBASIC2.75□□□□□ -1.97
SH3RF2Q8TEC5 AC009237.6-201ENST00000446969 424 ntBASIC2.75□□□□□ -1.97
SH3RF2Q8TEC5 RNU6-437P-201ENST00000459408 95 ntBASIC2.75□□□□□ -1.97
SH3RF2Q8TEC5 AC018868.1-201ENST00000491307 315 ntBASIC2.75□□□□□ -1.97
SH3RF2Q8TEC5 AC097462.1-201ENST00000514125 324 ntBASIC2.75□□□□□ -1.97
SH3RF2Q8TEC5 RNU6-1007P-201ENST00000516586 107 ntBASIC2.75□□□□□ -1.97
SH3RF2Q8TEC5 RNU7-172P-201ENST00000517125 64 ntBASIC2.75□□□□□ -1.97
SH3RF2Q8TEC5 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.75□□□□□ -1.97
SH3RF2Q8TEC5 AC004832.5-201ENST00000608677 401 ntBASIC2.75□□□□□ -1.97
SH3RF2Q8TEC5 AL161431.1-201ENST00000618966 4205 ntBASIC2.74□□□□□ -1.97
SH3RF2Q8TEC5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
SH3RF2Q8TEC5 Y_RNA.229-201ENST00000364347 113 ntBASIC2.74□□□□□ -1.97
SH3RF2Q8TEC5 SNORA72-201ENST00000384339 132 ntBASIC2.74□□□□□ -1.97
SH3RF2Q8TEC5 RNU6-239P-201ENST00000390990 99 ntBASIC2.74□□□□□ -1.97
SH3RF2Q8TEC5 RNA5SP496-201ENST00000391240 109 ntBASIC2.74□□□□□ -1.97
SH3RF2Q8TEC5 RNA5SP511-201ENST00000410487 115 ntBASIC2.74□□□□□ -1.97
SH3RF2Q8TEC5 EDDM3CP-201ENST00000415977 425 ntBASIC2.74□□□□□ -1.97
SH3RF2Q8TEC5 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.74□□□□□ -1.97
SH3RF2Q8TEC5 AL513328.1-201ENST00000446460 224 ntBASIC2.74□□□□□ -1.97
SH3RF2Q8TEC5 AC107027.2-201ENST00000512197 115 ntBASIC2.74□□□□□ -1.97
SH3RF2Q8TEC5 SNORA9.3-201ENST00000516383 129 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms